Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3493 ATGGAAGAACCACAGAATTCAGAGCAAACCCACATTCCCATACTCACATTCCCCTCAAAACCAGACAATGCCTCTGTCCCCCACATCCCCACAGGAGATGTCTCTCTCCGGCCACCCCACCATCGGCGCCGCCGCAGCAGAGACCAACCCTCCACCGCCACCAGCAGGAAGAAGACAAAGACCAAGACGGTAAACGAAGATGATCAGAAAGTAGAAGATCACGAGGACGAAGAAGAAGAAGAAGAAGAAAGGGAAGAGATAGAGAAGAAGATTGAGGCATTACAGAGGATAGTGCCAGGTGGCGAGTCCTTGGAAATGGACAAGCTGTTCGATGAAACTGCAGGTTATATAATGGCGTTGCAGTACCAAATCAAAGGCTTAAGAGCTCTCTCCAACTTGTTCGAGAGGTTAGAGAAAGAGAAGTCCAAACTCGGTGGTTGA 441 0.4943 MEEPQNSEQTHIPILTFPSKPDNASVPHIPTGDVSLRPPHHRRRRSRDQPSTATSRKKTKTKTVNEDDQKVEDHEDEEEEEEEREEIEKKIEALQRIVPGGESLEMDKLFDETAGYIMALQYQIKGLRALSNLFERLEKEKSKLGG 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3493 146 Coils Coil 64 97 - -
Prci2g3493 146 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 129 IPR036638 GO:0046983
Prci2g3493 146 CDD bHLH_AtIBH1_like 93 130 IPR044549 GO:0006355
Prci2g3493 146 MobiDBLite consensus disorder prediction 70 86 - -
Prci2g3493 146 MobiDBLite consensus disorder prediction 48 69 - -
Prci2g3493 146 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 134 IPR044660 GO:0006355
Prci2g3493 146 MobiDBLite consensus disorder prediction 1 88 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3493 82 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 40.816 6.92e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3493 - - pcin:129298466 226.483