Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3486 ATGTCATCCAATAGCTCTTTAAAAGCGGAATTGTCAAAGAAGATTTTGGGTGTGAAATTATGGATTTTAATTGGGGTTTGTGTAGGCGCCTTTATAATATTGATTCTTTGTATATTATCCATATGTGTGATGTTTCGGAGAAAATCTAGAAAATCTCTGGACAGGTATTCTTTATCACAAATACCAAATATCTCAAAAGATATTAAGGTGGACAAAGTTGGGGTGCAGAGTTCTCATGATCACCCAGAAAGTGTATTTATTCATGTTAACGACAAAGCAACTGATAAGAATTCAGATAAGATGCTTGCCCACTTAGGCATGAATAAATCCAGTGATCCTGACAATATCAGTCAGTGCAGCTCAATTTATCATCACGAAAGAGGATTTAGTTCCTTGTCAGGAGAAGAAGGAAGCTCTGGGACTGTGAAGAAGCAATCTACATTGTCATATGGAGGGCTTGTGACTGCATCTCCTTTAGTTGGATTGCCAGAGTTTTCTCATCTTGGATGGGGCCACTGGTTTACACTTAGGGATCTGGAACTAGCAACAAATCGTTTCTCAGCTGAAAATGTGCTAGGTGAGGGTGGATACGGCGTTGTTTACAAGGGCAGACTGATCAATGGAACTGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAGGCAGAGAAAGAATTCAGGGTAGAAGTGGAAGCTATAGGCCATGTACGACATAAAAATCTTGTACGCCTGCTTGGATACTGTGTTGAAGGAGTTCACAGGCTTTTGGTGTACGAATATGTAAATAACGGAAACCTAGAACAATGGTTACACGGGGTTTTGCGCCAACATGGAATTCTTACCTGGGAGGCCCGCATGAAAGTTGTACTTGGCACAGCCAAAGCGCTTGCTTACTTGCATGAGGCAATTGAACCAAAAGTTGTTCACCGTGATATAAAGTCTAGCAACATATTAATTGATGATGAGTTTAATGCAAAGGTTTCTGACTTTGGATTGGCCAAACTTTTGGACTCAGGAGAAAGCCACATAACTACTAGAGTAATGGGAACATTTGGTTATGTGGCACCGGAGTATGCTAATACTGGTTTATTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCCTCTTGGAAGCAGTCACTGGAAGGGACCCTGTAGACTATGCGCGACCTGCTAACGAGGTTAATCTTGTCGAATGGCTCAAGATGATGGTGGGAACAAGAAGAGCTGATGAAGTTGTTGATCCAAGCCTTGAAGTTAAACCATCAACCCGATCTTTAAAGCGTGCCCTTCTGGTCGCACTTAGGTGTGTTGATCCTGATGCAGACAAGAGACCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATACCCCTTCCGAGAGGATCGAAGGAATCGAAAGAGCCGCTCAACGAGCATGGAAATTGATTCCATGAAGGATATTTCTGGTTTATCTGAAGCAGAAAAGAAGGCAGGCGACTCTGAAAACCGAGCACCAGATACAACTGAGGGGTAG 1530 0.4229 MSSNSSLKAELSKKILGVKLWILIGVCVGAFIILILCILSICVMFRRKSRKSLDRYSLSQIPNISKDIKVDKVGVQSSHDHPESVFIHVNDKATDKNSDKMLAHLGMNKSSDPDNISQCSSIYHHERGFSSLSGEEGSSGTVKKQSTLSYGGLVTASPLVGLPEFSHLGWGHWFTLRDLELATNRFSAENVLGEGGYGVVYKGRLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGVLRQHGILTWEARMKVVLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTRRADEVVDPSLEVKPSTRSLKRALLVALRCVDPDADKRPKMSQVVRMLEADEYPFREDRRNRKSRSTSMEIDSMKDISGLSEAEKKAGDSENRAPDTTEG 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3486 509 SUPERFAMILY Protein kinase-like (PK-like) 170 460 IPR011009 -
Prci2g3486 509 SMART serkin_6 186 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3486 509 MobiDBLite consensus disorder prediction 462 509 - -
Prci2g3486 509 MobiDBLite consensus disorder prediction 486 509 - -
Prci2g3486 509 Gene3D Phosphorylase Kinase; domain 1 168 261 - -
Prci2g3486 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Prci2g3486 509 FunFam Putative receptor-like serine/threonine-protein kinase 262 472 - -
Prci2g3486 509 MobiDBLite consensus disorder prediction 462 479 - -
Prci2g3486 509 Gene3D Transferase(Phosphotransferase) domain 1 262 475 - -
Prci2g3486 509 FunFam Putative receptor-like protein kinase 168 261 - -
Prci2g3486 509 Pfam Protein kinase domain 188 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3486 509 ProSitePatterns Protein kinases ATP-binding region signature. 192 215 IPR017441 GO:0005524
Prci2g3486 509 ProSiteProfiles Protein kinase domain profile. 186 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3486 509 Coils Coil 206 226 - -
Prci2g3486 509 PANTHER OS01G0323000 PROTEIN 1 480 - -
Prci2g3486 509 CDD STKc_IRAK 192 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3486 Prci-Chr2 44723261 44728053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3486 17 460 Trihelix Transcription Factor Family AT1G70460 39.556 3.83e-97 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci2g3486 Pkinase 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3486 - - tcc:18612176 874.774