Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci2g3471 | ATGTTAGGATTTTCTCTGGGTCCAAGAGAAGATACCATCACGATGGCTTTGAAGGTTTCTCTTGTTCTGGTTCTAATTGTAATGTGTTCCTGCGCTGTGGATGCGATTTCTGGGAATAACAACCAGAACTGTCTCAACAAAAATGGCTCTTCTCTCGCTGCCATCAAAATGCCTGATCATCCAAACATCAATACTGTGTCTTCTTCTGCAGATAGTGACTGTAGCTTCTCAAACTCCGAGAAATTTGAGCATTCAGGAGTAACCACATCAGATGAAGATGCTGATGACAGTTATGTAGCAAAACGACTCAAGCAATTGCTAAAGCTCAATCTGAAACGCCGACCGGTGATGGTGAATGAAGATGCTGAACCAAGAAAATCTATGATTGATTTCACAGTTCGGGATTTAACCAGAATCCAGACCCTTCATAGAAGGGTCATAGAGAAGAAGAATCAAAACACTGTTTCAAGGCTGCAGAAAATACAGCCCAAATCAAAGCACCAACTGTATGAGCAGGTTGTTACTCCGGCACCGGCACCGGCACCGGCACCGGCATATTTTGCAAATGAGCATCCAGGCCGGCTTGTGGCAACATTGGAATCAGGGGCCAGTTTTGGGTCTGGAGAGTACTTCATGGATGTGTTTGTGGGCACACCTCCTAAGCATTTCTCTTTGATACTTGATACGGGTAGCGATCTTAATTGGATTCAATGCGTTCCTTGTTATGTTTGTTTTGAGCAAAGTGGACCTCACTATGATCCTAAAGATTCCAGTTCCTTCAAGAACATAAGCTGCCATGATCAACGGTGCCAATTAGTGTCATCCCCAGATCCACCTCAGGCTTGCAAGGCTGAGAACCAGACCTGCCCTTACTTCTACTGGTATGGAGATAGCTCCAATACAACTGGGGATTTTGCACTTGAGACTTTTACAGTTAATCTCACAGCATCTTCAGGGAAGTCTGAGTTCAGGCGTGTGGAGGATGTAATGTTTGGCTGTGGACATTGGAATAGAGGTCTCTTCCATGGAGCTGCGGGTTTGCTAGGATTAGGAAGAGGGCCATTGTCATTTGCTTCTCAGCTTCAATCTCTTTATGGCCACTCCTTTTCCTATTGTCTTGTGGATAGAAACAGTAACATTAGCAGCAAACTGATATTTGGAGAAGACAAGAAACTTCTCAGAAACCCAAACTTGAATTTCACTTCATTTGTGGGTGGGAAAGAAAACCCAGTTGATACATTTTACTATGTGCAGATCAAATCTGTCATTGTCGGTGGTGAAGTACTGAATATACCAAAGGAAACTTGGCTTGCATCTGCAGGTGGTGGTGGAGGAACCATCATTGATTCTGGCACTACTCTGACTTATTTTGCAGAGCCTGCTTATGAGATCATCAAAGAGGCTTTCATGAAGAAGATCAAGGGCTACCTTATGATTGAAGATGGCCATCTTCCATTAAAGCCATGTTATAATGTTTCTGGGTTTGAAGCTATTGAGCTACCTAATTTTGGGATCATGTTTGCAGACGGAGCTGTTTGGGATTTCCCAGCGGAAAATTACTTCATTGAGATTGAACCAGGTAGTGTTGTTTGTTTGGCAATTCTGGGCACTCCTCATTCAGCTCTCTCCATAATTGGAAACTATCAGCAGCAGAACTTTCACATCCTCTACGATCTCAAGAATTCCAGACTCGGATATGCACCAGTCAATTGCGCTGATTCTTATGCACTGTTCTTTTGCTTCTTCCCCTTTCGTCCATCGTCTCAAATGGTTTCTTTCAGGTTTCACCAGTACCAGGTGGTGGGAAGGGCCCTTCCCACTGAGACAGATGAGCACCCCAAGATCTACCGTATGAAGCTTTGGGCCACCAATGAGGTCCGTGCGAAGTCCAAGTTCTGGTATTTCTTGAGAAAGCTGAAGAAGGTTAAGAAAAGCAATGGGCAAGTGCTAGCCATTAACGAGATTTTTGAGAAGAACCCTACCAAGATTAAGAACTACGGTATTTGGCTGCGTTATCAAAGTCGAACTGGTTATCATAACATGTACAAGGAATACCGAGATACCACTCTTAATGGTGCCGTTGAACAGATGTACAATGAAATGGCATCACGTCACCGGGTGAGGTTTCCATGCATCCAGATCATCAAGACAGCCACCATCCCTGCAAAGCTGTGCAAAAGAGAGAGCACCAAGCAGTTCCACAATTCTAAAATTAAGTTCCCATTGGTGTTCAGGAAGGTCAGGCCACCAAGTAGGAAGCTGAAGACAACTTACAAGGCATCAAGGCCCAACTTGTTTATGTGA | 2304 | 0.441 | MLGFSLGPREDTITMALKVSLVLVLIVMCSCAVDAISGNNNQNCLNKNGSSLAAIKMPDHPNINTVSSSADSDCSFSNSEKFEHSGVTTSDEDADDSYVAKRLKQLLKLNLKRRPVMVNEDAEPRKSMIDFTVRDLTRIQTLHRRVIEKKNQNTVSRLQKIQPKSKHQLYEQVVTPAPAPAPAPAYFANEHPGRLVATLESGASFGSGEYFMDVFVGTPPKHFSLILDTGSDLNWIQCVPCYVCFEQSGPHYDPKDSSSFKNISCHDQRCQLVSSPDPPQACKAENQTCPYFYWYGDSSNTTGDFALETFTVNLTASSGKSEFRRVEDVMFGCGHWNRGLFHGAAGLLGLGRGPLSFASQLQSLYGHSFSYCLVDRNSNISSKLIFGEDKKLLRNPNLNFTSFVGGKENPVDTFYYVQIKSVIVGGEVLNIPKETWLASAGGGGGTIIDSGTTLTYFAEPAYEIIKEAFMKKIKGYLMIEDGHLPLKPCYNVSGFEAIELPNFGIMFADGAVWDFPAENYFIEIEPGSVVCLAILGTPHSALSIIGNYQQQNFHILYDLKNSRLGYAPVNCADSYALFFCFFPFRPSSQMVSFRFHQYQVVGRALPTETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASRPNLFM | 767 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci2g3471 | 767 | Hamap | 50S ribosomal protein L18Ae [rpl18a]. | 595 | 658 | IPR028877 | - | |
| Prci2g3471 | 767 | Gene3D | Acid Proteases | 187 | 388 | IPR021109 | - | |
| Prci2g3471 | 767 | SUPERFAMILY | Acid proteases | 202 | 573 | IPR021109 | - | |
| Prci2g3471 | 767 | ProSiteProfiles | Peptidase family A1 domain profile. | 210 | 567 | IPR033121 | - | |
| Prci2g3471 | 767 | CDD | pepsin_A_like_plant | 209 | 571 | IPR034161 | - | |
| Prci2g3471 | 767 | Gene3D | Acid Proteases | 393 | 576 | IPR021109 | - | |
| Prci2g3471 | 767 | Pfam | Xylanase inhibitor N-terminal | 210 | 387 | IPR032861 | - | |
| Prci2g3471 | 767 | FunFam | 60S ribosomal protein L18a | 661 | 736 | - | - | |
| Prci2g3471 | 767 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 225 | 236 | IPR001969 | GO:0004190|GO:0006508 | |
| Prci2g3471 | 767 | SUPERFAMILY | RplX-like | 660 | 735 | - | - |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci2g3471 | K22683 | - | zju:107416111 | 1092.41 |
Showing 1 to 1 of 1 entries