Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3455 ATGGGTCGCATTGAAGGCGGCAAAGTGGGAGAAAACAACTTCACTGTGACGGTGACGAAGGAGGAGGTGGTGGCTGCTGTGTTGCCGTTGCCAGAGCATTGGCTTCGGCTCTCCAACCTCGACCTCCTTCTGCCGCCGCTAGACGACGGAGTCTTCTTTTGCTACAATAAGCCAGCTGCCGCCGGGACTGTTGTGGTGGGGGCTCTCAAGAAGGGCTTGGCTGAAGCTCTGGTTTCCTTCTACGCCTTGGCGGGTGAGGTGGTGGCCAACTCCTCCGGCGAACCGGAGCTCCTCTGCAACAACCGTGGCGTTGATTTTGTGGAGGCTGACGCTGACGTGCAGCTGAGAAGCCTCGACTTGCACAACCCTGATGATTCCGTTGAAGGGAAGCTTGTTCCTACGAAGAAACACGGCGTACTTGCTATTCAGGCTACATTTCTCAAGTGTGGTGGGCTAGTAGTTGCATGCTCTTTCGATCACCGTATCGCCGATGCCTACTCGGCCAACATGTTCCTTGTATCTTGGGCCCAGCTGTCACAGTCCACCAAGCCCACAATATCCACTCTTTCATCGCCACCATGTTTCCGCCGATCTCTCCTCAACCCACGGCGGCCCGGTCGCATCCATCCGTCGCTCGACCGGATGTTTATTCCAGTCTCCGACCTACCTCCTCCAAAGAAGCACAGTGCCGAATCCGAATCCGACCCTGTCATTAGCCGGATCTACTACATCACGGCCGACGAACTTAACCACATTCAGTCACTTGCGAACTCGGACTCAAACGTCGACGTCAATGCGGTGAAGCGAACCAAACTTGAGTCTTTATGCGCCTTCTTGTGGAAGATGGTTGCTGCGAGTACCAAGGGCAAAAGGATCATCACAAAAATGGGAATTGTCGTAGACGGAAGGAGAAGGCTGAGCAATGGTAATGACAAACAGAAAGCTTCACTTTTATGTTCGTATTTCGGAAACGTGATTTCAATACCGTACGGCGAAAAGTCAGCGAGGGAGCTGACGGAGAAGTCGTTGAGTTGGGTGGCCGACGAAGTTCACGAGTTCTTGGAAGAAGCAAAGACGGAGGAGCATTTCCTGGGCCTCATAGACTGGGTTGAGGCGCACCTCCCTGGCGGTGGAGTGGCGAGGATATATTACGGCGGCGGAGACGGAGAAGAAGAGGGGCCAGCTTTTGTGGTGTCGTCGGGGCAAACATTCCCGGAAGAGAAGGTGGATTTCGGGTGGGGGAGGCCAGTGTTCGGGTCGTACCACTTCCCATGGGGTGGCGACGCCGGGTATGTGATGCCGATGCCGAGTCCGGCGGGTAAGGGCGATTGGGTGGTATACATGCACCTTCGAAGAGGACAATTGGAGAAGATAGAGTCTGAAGCGGGTCGTGTGTTTCGGCGCTTGACTTGGGACTACCTTGTTCATTGA 1431 0.5479 MGRIEGGKVGENNFTVTVTKEEVVAAVLPLPEHWLRLSNLDLLLPPLDDGVFFCYNKPAAAGTVVVGALKKGLAEALVSFYALAGEVVANSSGEPELLCNNRGVDFVEADADVQLRSLDLHNPDDSVEGKLVPTKKHGVLAIQATFLKCGGLVVACSFDHRIADAYSANMFLVSWAQLSQSTKPTISTLSSPPCFRRSLLNPRRPGRIHPSLDRMFIPVSDLPPPKKHSAESESDPVISRIYYITADELNHIQSLANSDSNVDVNAVKRTKLESLCAFLWKMVAASTKGKRIITKMGIVVDGRRRLSNGNDKQKASLLCSYFGNVISIPYGEKSARELTEKSLSWVADEVHEFLEEAKTEEHFLGLIDWVEAHLPGGGVARIYYGGGDGEEEGPAFVVSSGQTFPEEKVDFGWGRPVFGSYHFPWGGDAGYVMPMPSPAGKGDWVVYMHLRRGQLEKIESEAGRVFRRLTWDYLVH 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3455 476 Gene3D - 222 461 IPR023213 -
Prci2g3455 476 Gene3D - 10 214 IPR023213 -
Prci2g3455 476 Pfam Transferase family 15 462 - -
Prci2g3455 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3455 Prci-Chr2 44045831 44048058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3455 38 459 Monolignol Biosynthesis Gene Families AT5G48930 27.252 4.98e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3455 - - cave:132187343 588.186