Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3415 ATGGCTTCTTCTTCTTCTTCTTCTTTGGCTTCTCTCTTCTTTCACTCCGTTCTTCTTCTTCTTCTCTCCCTCACTACATCTTCTTCCTCTGTCTCATCACCTCCTCTCTTGTCTCTCAAAAGGCAAGCTTCAATCTTGCTCTCTCTTAGACGAGGTTTTCAACCTCAGAATTCTTCTCTTCAATCCTGGCATGTCTCCAACTTTCTGTCTCTCTGTTCCTGGGATGGCATCAAATGTGACCGTAGCAACAACTCTGTGGTGTCCTTTGACATATCCGATTACAACTTTTCTGGGTTTCTTTCCCCTGTCATCGCCGAGCTCCGAGGTCTTGCTTATGTCTCGGTTGCCGGAAACAGCTTTTCCGGCGAGTTTCCGTCGGAGATTCTCCGGCTGCCCGGGCTGCAATTCCTCAACATATCCAACAACATGTTCACTGGGAACATGAGCTGGGAGTTCTCCGACATGAACGAGCTTGAGGTTCTTGATGCTTATGACAACGACTTCGACGGCGAGCTACCTCTCGGTGTCACCAATCTTCCCAAGCTCAGGCACTTGAATTTTGGCGGGAATTACTTTTCCGGGAGAATCCCAGAAGACTATGGGAAAATGGTGGGGCTGAATTTTTTTTCTCTTGCTGGGAATGATCTAAGTGGGTTTATCCCCAGGGAGCTTGGGAATCTCACTAATTTGACCCATTTATACTTGGGATATTTCAACAAGTTTGACGGTGGAATCCCAAGTGAGCTTGGGAATCTAATCAATCTGGTTCATCTAGACCTTGCAAATTGTAGCTTGAATGGTACAATTCCATCAGAATTAGGCAAGCTTTCAAAATTAGACACGCTTTTCTTGCAAACCAATCAGCTTACTGGTTCAATCCCACCTCAGATAGGCAATTTGAGCAGCTTGAGATCTCTTGATCTTTCCAACAATGAGCTGGTTGGAGAAATCCCATTTGAATTCTCAAACCTTCATGAGCTCATACTCATCAACTTGTTCATCAACAAATTGCATGGTGAGATTCCTCAGTTCATCTCTGAGCTCCCAAAGCTTGAAACTTTAAATCTATGGAAGAACAACTTCACTGGTTCTATCCCTCCGGGACTTGGCCAGAATGGGAAGTTAGTTGAGCTTGATCTTTCATCAAATAAGCTTACTGGGTTAGTCCCAAAATCTCTCTGCCTTGGGAAGAAGCTCAAGATCTTAATCTTGCTCAATAATTTTCTCTTTGGTTCTCTGCCTGATGACCTTGGAGAATGCAACACACTTCAAAGAGTTCGCTTGGGTCAGAACTATTTAACAGGAAAAATACCTACCGGTTTTCTTTATCTTCCCGAACTTCTACTACTAGAGCTGCAGAACAACTATCTCACTGGTGTTCTTCCTCAAGATTCAGCAAATTCAACATCAAAACTTGAGCAGTTGAATCTATCAAACAATCGCCTCTCGGGGTCTCTCCCAGAATCAATTGGGAATTTCCCAAATTTGCAGAATCTTCTCCTCAGTGAAAACAGATTCTCTGGAGAAATCCCACCAGATATAGGGAGGTTGAAGAATCTGTTAAAGTTGGATATGAGCAGAAACAATATATCAGGTAGGATTCCTTCAGAGATAGGAAACTGTACTTTGCTCACATGCTTAGACTTAAGCCAGAACCAACTTTCAGGTCCTATCCCTGTTCAAATTTCCCAAATTCACATCTTAAACTATCTTAATGTCTCAAGGAACAACCTTAACCAGAGCCTCCCAAAAGAAATAGGGACCATGAAAGGGTTAACCTCAGCAGATTTCTCTCACAATAACTTCTCTGGTTCAATTCCTGACGTTGGGCTGTTCACTGTCTTGAACTCATCTTTCTTCCAGGGAAACCCAAATCTATGTGGGTATGATCTAAACCCATGTAGGACTCATTCATCAAACTCATTTTCAGATTCTGGCGAGACTAACAATACAAAATCTGGAGTTCCTGGGAAGTACAAGCTTCTTTTTGTACTTGCACTGCTGGGATGTTCTTTTATTTTTGCAGCCTTAGCTATTATCAAAAGCAGAAAGAAGGCAAGGAGGAATTCAAATTCATGGAAGCTCACAGCATTTCAGAAGCTAGAATATGGCAGTCAAGACATACTGGGGTGCATAAAGGAGAGCAATGTGATAGGAAGAGGAGGAGCTGGGATTGTGTACAGAGGCACCATGCCAAATGGTGAGGAGCTAGCAGTGAAAAAACTCTTAGGATTCAACAAAGGATCTTCTCATCATGACAATGGTTTATCTGCAGAAATAAGAACATTGGGCAGGATAAGACACAGGTACATTGTGAGATTACTAGCTTTTGTTTCAAACAGAGAGACAAATTTGCTTGTGTATGAGTACATGCCAAATGGGAGTTTGGGTGAAGTGCTTCATGGGAAGAGAGGTGAGTTTTTAAAGTGGGAAACAAGGCTTAAGATAGCCATTGAAGCAGCAAAAGGGCTTTGTTATCTGCATCATGATTGTTCACCATTGATAATACATAGAGATGTGAAGTCTAATAACATATTGTTGAATTCTGAGTTTGAGGCTCATGTGGCTGACTTTGGACTTGCCAAGTTCTTACAAGACACTGGGACATCAGAATGCATGTCTTCCATTGCTGGCTCTTATGGCTATATTGCTCCAGAGTATGCATACACATTAAAAGTTGATGAGAAGAGTGATGTTTATAGTTTTGGAGTGGTACTACTAGAACTCCTGACAGGGAGGCGGCCGGTGGGCGATTTTGGAGAAGAAGGACTAGACATTGTTCAGTGGACAAAGATACAAACCAACTGGAGCAAAGACAAGGCGGTGAGGGTCCTTGATGAGAGGCTGCATAGTAGTATCCCTTTAGAGGAAGCAAAGCAAGTGTTCTTTGTGGCCATGCTTTGTGTTCAAGAACACAGTGTGGAGAGACCCACCATGAGAGAAGTGGTTGAAATGCTTGTACAAGCAAAGCAGCCAAATAAAATTTAA 2988 0.4264 MASSSSSSLASLFFHSVLLLLLSLTTSSSSVSSPPLLSLKRQASILLSLRRGFQPQNSSLQSWHVSNFLSLCSWDGIKCDRSNNSVVSFDISDYNFSGFLSPVIAELRGLAYVSVAGNSFSGEFPSEILRLPGLQFLNISNNMFTGNMSWEFSDMNELEVLDAYDNDFDGELPLGVTNLPKLRHLNFGGNYFSGRIPEDYGKMVGLNFFSLAGNDLSGFIPRELGNLTNLTHLYLGYFNKFDGGIPSELGNLINLVHLDLANCSLNGTIPSELGKLSKLDTLFLQTNQLTGSIPPQIGNLSSLRSLDLSNNELVGEIPFEFSNLHELILINLFINKLHGEIPQFISELPKLETLNLWKNNFTGSIPPGLGQNGKLVELDLSSNKLTGLVPKSLCLGKKLKILILLNNFLFGSLPDDLGECNTLQRVRLGQNYLTGKIPTGFLYLPELLLLELQNNYLTGVLPQDSANSTSKLEQLNLSNNRLSGSLPESIGNFPNLQNLLLSENRFSGEIPPDIGRLKNLLKLDMSRNNISGRIPSEIGNCTLLTCLDLSQNQLSGPIPVQISQIHILNYLNVSRNNLNQSLPKEIGTMKGLTSADFSHNNFSGSIPDVGLFTVLNSSFFQGNPNLCGYDLNPCRTHSSNSFSDSGETNNTKSGVPGKYKLLFVLALLGCSFIFAALAIIKSRKKARRNSNSWKLTAFQKLEYGSQDILGCIKESNVIGRGGAGIVYRGTMPNGEELAVKKLLGFNKGSSHHDNGLSAEIRTLGRIRHRYIVRLLAFVSNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWETRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLDIVQWTKIQTNWSKDKAVRVLDERLHSSIPLEEAKQVFFVAMLCVQEHSVERPTMREVVEMLVQAKQPNKI 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3415 995 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 240 345 - -
Prci2g3415 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Prci2g3415 995 SMART LRR_typ_2 373 395 IPR003591 -
Prci2g3415 995 SMART LRR_typ_2 444 467 IPR003591 -
Prci2g3415 995 SMART LRR_typ_2 252 276 IPR003591 -
Prci2g3415 995 SMART LRR_typ_2 565 589 IPR003591 -
Prci2g3415 995 SMART LRR_typ_2 131 154 IPR003591 -
Prci2g3415 995 SMART LRR_typ_2 348 372 IPR003591 -
Prci2g3415 995 SMART LRR_typ_2 469 493 IPR003591 -
Prci2g3415 995 SMART LRR_typ_2 517 541 IPR003591 -
Prci2g3415 995 SMART LRR_typ_2 300 323 IPR003591 -
Prci2g3415 995 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 681 790 - -
Prci2g3415 995 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 352 638 - -
Prci2g3415 995 Pfam Protein tyrosine and serine/threonine kinase 714 986 IPR001245 GO:0004672|GO:0006468
Prci2g3415 995 SUPERFAMILY RNI-like 89 425 - -
Prci2g3415 995 Gene3D Transferase(Phosphotransferase) domain 1 791 994 - -
Prci2g3415 995 SUPERFAMILY L domain-like 317 644 - -
Prci2g3415 995 Gene3D Ribonuclease Inhibitor 37 234 IPR032675 -
Prci2g3415 995 ProSiteProfiles Leucine-rich repeat profile. 374 395 IPR001611 GO:0005515
Prci2g3415 995 SUPERFAMILY Protein kinase-like (PK-like) 707 987 IPR011009 -
Prci2g3415 995 Gene3D Ribonuclease Inhibitor 510 635 IPR032675 -
Prci2g3415 995 SMART serkin_6 712 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3415 995 Gene3D Ribonuclease Inhibitor 235 395 IPR032675 -
Prci2g3415 995 ProSiteProfiles Leucine-rich repeat profile. 471 493 IPR001611 GO:0005515
Prci2g3415 995 FunFam Leucine-rich repeat receptor-like protein kinase 39 198 - -
Prci2g3415 995 ProSiteProfiles Protein kinase domain profile. 712 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3415 995 Pfam Leucine rich repeat 450 506 IPR001611 GO:0005515
Prci2g3415 995 Pfam Leucine Rich Repeat 302 324 IPR001611 GO:0005515
Prci2g3415 995 Pfam Leucine Rich Repeat 254 276 IPR001611 GO:0005515
Prci2g3415 995 Pfam Leucine Rich Repeat 374 394 IPR001611 GO:0005515
Prci2g3415 995 Gene3D Ribonuclease Inhibitor 397 509 IPR032675 -
Prci2g3415 995 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 791 995 - -
Prci2g3415 995 PRINTS Leucine-rich repeat signature 375 388 - -
Prci2g3415 995 PRINTS Leucine-rich repeat signature 469 482 - -
Prci2g3415 995 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 206 987 - -
Prci2g3415 995 Gene3D Phosphorylase Kinase; domain 1 681 790 - -
Prci2g3415 995 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3415 Prci-Chr2 43564651 43569583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3415 27 988 Receptor kinase-like Gene Family AT5G65700 57.988 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci2g3415 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3415 - - gmx:100816158 1456.04