LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g3400	ATGGCCAAGCAGCACTGGATAGCTCTCATTTCTGTGTGTTTCATTATTCTTCTTCCATGTCTTTGCATGGCCACTGAAAATGATAATGATGATACAAAAACGTACATCGTCTACATGGGATCACTTCCTCGGGGATTACCTGATTACTCTCCAACCTCCCATCACCTTAGAATTCTTCACCAAGTTCTTAACGATGACGTCAATGGCATTAACAATGACGCCACAAGTTCCCTGATCCGGAGCTACAGGAAAAGCTTCAATGGGTTTGCTGCAAAACTCACCAGTGATCAGAGGGACAAGATAGCTGAGATGGACGAGGTGGTCTCCGTGTTTGAAAGCAAACAACTTCGAATTCAGACAACAAGATCCTGGGACTTCATGGGATTCACCGAGTCAGCAATAAAGAGAAACGTGTCAGCTGAAAGTGATGTTATCGTGGGAGTTATAGACACCGGAGTGTGGCCGGAATCTGAGAGTTTCAGTGACGAAGGTCTGAGCGATGTTCCGAAGAAATGGAGAGGGACTTGTGCCGGCGGGAGGAACTTCACCTGCAACAAGAAGGTCATCGGAGCTCGGTCCTATGCAAGTGATTCTGCGAGAGACGAAAATGGCCATGGAAGTCACACTGCCTCTATAGCAGCTGGGAACCTTGTTAATGGAGTCAACTTTTATGGAATAGCAAACGGTACAGCAAGAGGAGGAGTTCCATCTGCAAGAATTGCTACATATTCAACTTGTGATACGTCAGGATTATGTTCTGAGCACAATATATTGGCTGCTTTTGATGACGCCATTTCTGATGGCGTCGACGTCATTTCTGTGTCACTAGGAATGACACAACCTAAAGATTTTCTCGATGATTCCTTAGCCATCGGTGCTTTTCATGCTATGGAGAAAGGAATCCTCACTGTCCAAGCTGCTGGCAACTCTGGTCCTTTCTTTGCCACAGTTTCAAGCGTAGCACCATGGATCCTAGCTGTTGCAGCAAGTAGCACAGATCGTAAAATCATCGACAAACTTGTTCTGGGCAATGGACACACACTGGTTGGCAACTCCATTAATGCTTTTAACTCAAATGGGTCCAAGTTTCCTATAGCTAAGATAAATAGTGATTCAGATGAATGTTCCAAAGAAGAAGGAAGAAGTTGCTCTTGTTTTGACAAAAACTTGGTGAAAGGAAAGATTGTGTTGTGCAATGAAGATTTGCCTGCAAGCACCAGTGTTAAGTCTCAAGGCGTACTTGGAGTCATCACAACTTCAGAATCCTATAATGAAGATTTGTCAAGCATTGTGTATCTACCATCATTGGACATTTCCAAAGAAGCTTTTGTTACTATTGGTTCATACATGAATTCAACCAAAGATCCAAAGGCAGAGATAAAGAAGAGTGAGATGGTTCTAGATAAGAACGCCCCAAGAACAATTGATTTCTCTTCACGTGGGCCTAATTTCATTGTAGGAGATATCTTAAAGCCAGATATAAGTGCTCCTGGAGTTGATATTTTGGCTGCATATTCACCAAATGGACTTGTTTCAAAATATGCAGAAGAAGAAAGATCTGTCAAATACAACTTTTTGTCAGGAACATCCATGTCTTGCCCTCATGTTTCTGGAATAGCTGCATATTTGAAGACCCTTCATCCAGATTGGTCTCCTGCAGCTATCAAATCTGCCATTTTAACAACAGCAAAACCTATGAAGAAAGTTAATAATTCTAAGGATGCTGTTGGTGAATTTGAATATGGATCTGGACATGTGAATCCAGTACAAGCTAGTGATCCAGGGCTGGTTTATGACATATCCAAGGATGATTATGTGGAAATGTTATGCAACTATGGTTTCAGTGCTTCACAGATTAAGAAGATTTCTGGAGACAATAGCAGTACTTGTCCCAAATCTTCTCACAGAGATTTAGTCAAGAATCTCAATTATCCTACACTTGGAGCGAAAGTTAAGCCTTTAACCTCATTCAAGATTCAGCTTAATCGAACTGTGACAAATGTTGGATCTGTGAACTCAACCTACAAGGCAAGGATTCTACCAGCAAGTTCTCACAAGGTAGATATTAGAGTGGAACCTGAGTTTCTCATGTTCAAGTCATTGAATGAGAAGAAGTCTTTTGTTGTGAACATTATTGGGAAGGGCATTGCAAATCAAGGTGCAATTTCATCTTCATTGATATGGTCAGATGGCACCCACAATGTGAGAAGCCCGATTGTTCTGATGGCGTTTTGA	2235	0.4192	MAKQHWIALISVCFIILLPCLCMATENDNDDTKTYIVYMGSLPRGLPDYSPTSHHLRILHQVLNDDVNGINNDATSSLIRSYRKSFNGFAAKLTSDQRDKIAEMDEVVSVFESKQLRIQTTRSWDFMGFTESAIKRNVSAESDVIVGVIDTGVWPESESFSDEGLSDVPKKWRGTCAGGRNFTCNKKVIGARSYASDSARDENGHGSHTASIAAGNLVNGVNFYGIANGTARGGVPSARIATYSTCDTSGLCSEHNILAAFDDAISDGVDVISVSLGMTQPKDFLDDSLAIGAFHAMEKGILTVQAAGNSGPFFATVSSVAPWILAVAASSTDRKIIDKLVLGNGHTLVGNSINAFNSNGSKFPIAKINSDSDECSKEEGRSCSCFDKNLVKGKIVLCNEDLPASTSVKSQGVLGVITTSESYNEDLSSIVYLPSLDISKEAFVTIGSYMNSTKDPKAEIKKSEMVLDKNAPRTIDFSSRGPNFIVGDILKPDISAPGVDILAAYSPNGLVSKYAEEERSVKYNFLSGTSMSCPHVSGIAAYLKTLHPDWSPAAIKSAILTTAKPMKKVNNSKDAVGEFEYGSGHVNPVQASDPGLVYDISKDDYVEMLCNYGFSASQIKKISGDNSSTCPKSSHRDLVKNLNYPTLGAKVKPLTSFKIQLNRTVTNVGSVNSTYKARILPASSHKVDIRVEPEFLMFKSLNEKKSFVVNIIGKGIANQGAISSSLIWSDGTHNVRSPIVLMAF	744

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g3400	744	Gene3D	Peptidase S8/S53 domain	143	605	IPR036852	GO:0004252\|GO:0006508
	Prci2g3400	744	CDD	PA_subtilisin_like	340	460	-	-
	Prci2g3400	744	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	35	740	IPR045051	-
	Prci2g3400	744	Pfam	Peptidase inhibitor I9	34	118	IPR010259	-
	Prci2g3400	744	CDD	Peptidases_S8_3	116	563	IPR034197	-
	Prci2g3400	744	Gene3D	-	333	467	-	-
	Prci2g3400	744	ProSitePatterns	Serine proteases, subtilase family, serine active site.	528	538	IPR023828	-
	Prci2g3400	744	Pfam	Fibronectin type-III domain	641	740	IPR041469	-
	Prci2g3400	744	Gene3D	-	609	743	-	-
	Prci2g3400	744	ProSiteProfiles	Serine proteases, subtilase domain profile.	123	592	-	-
	Prci2g3400	744	PRINTS	Subtilisin serine protease family (S8) signature	141	160	IPR015500	-
	Prci2g3400	744	PRINTS	Subtilisin serine protease family (S8) signature	201	214	IPR015500	-
	Prci2g3400	744	PRINTS	Subtilisin serine protease family (S8) signature	527	543	IPR015500	-
	Prci2g3400	744	Pfam	Subtilase family	142	583	IPR000209	GO:0006508\|GO:0008236
	Prci2g3400	744	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	20	118	IPR037045	-
	Prci2g3400	744	SUPERFAMILY	Subtilisin-like	139	592	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g3400	Prci-Chr2	43457308	43461124	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g3400	24	744	Subtilisin-like Serine Gene Family	AT5G59100	50.685	0.0	729

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g3400	-		-	pcin:129302788	949.503