LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g3399	ATGGCCAAGCAAAATTCCGTAGCCTTCATTTGTTTGTCTTTGATTCTTCTTGTATTCACATCATCAATTCCATTACCATGTGGCGCTAGTGACAAAAAAGATGATGATGATCGGAAAACTTACATCATCTACTTGGGATCACTTCCTCAGGAATCATCTTACTCTCCGACCTCACACCACCTTAGTATTCTCCGACATGTTTCTAATAATGGCGTCAACTTCGACGACGTCAATGAAGATGTCACAGACTCCTTGATTCGAAGCTACAGTAAAAGCTTCAACGGGTTTGCAGCAAAACTCACAAATGATCAGAGGGACAGGATGGCTGAGATGGAAGAGGTTGTCTCAGTTTTTGAAAGCAAAACATATCGAACCCAGACAACAAGATCATGGGACTTCCTGGGATTCACCGAGAAAGAAGCCGCAGCAAGAGTAGCACGCAACTCGTTATCATCTACAGAAAGTGATGATGTTATAGTCGGAGTTATTGACAATGGAATATGGCCAGAGTCTGAGAGTTTCAGTGACGAATGTCTGAGAGGTGTTCCTAAGAAATGGAAAGGAACTTGTGCTGGTGGGAAGAACTTCACATGCAACAAGAAGATAATCGGAGCTAGGGTTTATCCGAAGGATCGTGATACTGCAAGAGACCAAAACGGCCATGGAACTCACACTGCCTCAACAATAGCTGGGGATATAGTTCCCCATGTTAGCTTCTATGAAATAGCAAATGGTACAGCAAGAGGAGGGTCTCCATCTGCAAGAATCGCTGCATATGTAGCTTGTGATTATAACGGACTCATTTGCACAGGACAAGATATCTTAGCCGCTTTTGATGACGCCATTTCAGATGGCGTCGACATCATTTCAGTGTCCTTAGGGTTTTCAGACATCCTTGATTTTCTCAGTGACGCCATAGCCATCGGATCTTTCCACGCAATGAAGAGCGGAATCCTCACAGTCCATTCCGCCGGCAACAGTGGCCCAGAGATCGCCACCGTCGCCAGTGTCGCACCATGGATCCTAACCGTTGCTGCAAGTACTACAGATCGCAAAATCATTGACAAGGTTGTTCTTGGGAATGGCAAGACACTAACCGGTGTTTCCATTAATGCTTTTAACTCAAATGGGTCAAAGTATCCGATAGCTAACATAAATGGTGATCCGTTGACTTGTCCTAAAAATAATTCACGTGATTGTCCTTGTCTTGACGACACAGACTTGGTCAAAGGTAAGATTGTGTTATGTCGAGAACTACCTCAAGGCAAGAACGTTAAGGAACATGGTATTGTGGGTGTGATCGAAAATGCAATTCGTGATTACGCTGAGGTTGTGTCGCTACCCTCACTGGAGATTCCCAAGGAGGGTTTTGAAAGTCTTGTGTTGTACACAAACTCAAGTAAAGATCCAAGAGCTGAGATTATGAAGAGTGAGGTTGTGAGAGATAAAACTGCTCCAAAAACAGCTTTTTTCTCTTCACGTGGACCTAATCTCGTAGTTGCAGAGATTTTGAAGCCTGATATAAGTGCCCCAGGGGTTGATATCTTGGCTGCATATTCACCTCTTGCATCAGTTTCAAGCAGTTCAGAAGACAAAAGATCTGTGAGATACAGTTTTTTATCAGGAACTTCAATGGCTTGCCCTCATGTTTCTGGAATAGCTTCATATTTGAAGGCCCTTCACCCAGATTGGTCACCTGCAGCTATAAAATCAGCCATTTTAACCACAGCAAAACCCATGAAGAAAGTTGAAGTTTTGGATTTGGTTGGTGAGTTTGAATATGGATCAGGACTTCTGAACCCAGTACAGGCCAGTGATCCTGGGTTGATTTATGACATATCTGAAGAAGATTACGTGAGAATGTTATGCAACTTAGGGTTTAACACTACACAAATTAAGCAGATTTCTGGAGGTAATTATAGCAGAAGATGTCCTAGCTCTTCTCACACAGACATGGTGAAAAATCTTAATTATCCTTCACTGGCGGCTAAAGTTGAGCCTTTGAAGTCATTCACTGTTCAGTTCAATAGGACAGTGACAAATGTTGGACTTGCCAAGTCAACGTTCAAAGCAAGTATTTCATCACCAAGTTTTAATAATATGACTTTGACAGTGAAACCTAAGGTTCTGAGGTTCAAATCATTGAATGAGAGGAAATCTTTTGTGGTCGATGTTCGTGGAAAGGAACTTTCGGATCGTTCAGCAATCTCATCGTCGTTGGTATGGTCGGATGGCAGACACGTTGTGAGAAGTCCAATTGTTGTGATGGCGTATAACACTCCTTAA	2286	0.4278	MAKQNSVAFICLSLILLVFTSSIPLPCGASDKKDDDDRKTYIIYLGSLPQESSYSPTSHHLSILRHVSNNGVNFDDVNEDVTDSLIRSYSKSFNGFAAKLTNDQRDRMAEMEEVVSVFESKTYRTQTTRSWDFLGFTEKEAAARVARNSLSSTESDDVIVGVIDNGIWPESESFSDECLRGVPKKWKGTCAGGKNFTCNKKIIGARVYPKDRDTARDQNGHGTHTASTIAGDIVPHVSFYEIANGTARGGSPSARIAAYVACDYNGLICTGQDILAAFDDAISDGVDIISVSLGFSDILDFLSDAIAIGSFHAMKSGILTVHSAGNSGPEIATVASVAPWILTVAASTTDRKIIDKVVLGNGKTLTGVSINAFNSNGSKYPIANINGDPLTCPKNNSRDCPCLDDTDLVKGKIVLCRELPQGKNVKEHGIVGVIENAIRDYAEVVSLPSLEIPKEGFESLVLYTNSSKDPRAEIMKSEVVRDKTAPKTAFFSSRGPNLVVAEILKPDISAPGVDILAAYSPLASVSSSSEDKRSVRYSFLSGTSMACPHVSGIASYLKALHPDWSPAAIKSAILTTAKPMKKVEVLDLVGEFEYGSGLLNPVQASDPGLIYDISEEDYVRMLCNLGFNTTQIKQISGGNYSRRCPSSSHTDMVKNLNYPSLAAKVEPLKSFTVQFNRTVTNVGLAKSTFKASISSPSFNNMTLTVKPKVLRFKSLNERKSFVVDVRGKELSDRSAISSSLVWSDGRHVVRSPIVVMAYNTP	761

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g3399	761	Pfam	Peptidase inhibitor I9	40	125	IPR010259	-
	Prci2g3399	761	PRINTS	Subtilisin serine protease family (S8) signature	217	230	IPR015500	-
	Prci2g3399	761	PRINTS	Subtilisin serine protease family (S8) signature	155	174	IPR015500	-
	Prci2g3399	761	PRINTS	Subtilisin serine protease family (S8) signature	541	557	IPR015500	-
	Prci2g3399	761	Gene3D	-	622	758	-	-
	Prci2g3399	761	ProSiteProfiles	Serine proteases, subtilase domain profile.	130	605	-	-
	Prci2g3399	761	Pfam	Fibronectin type-III domain	655	755	IPR041469	-
	Prci2g3399	761	CDD	Peptidases_S8_3	123	577	IPR034197	-
	Prci2g3399	761	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	26	125	IPR037045	-
	Prci2g3399	761	Gene3D	-	350	481	-	-
	Prci2g3399	761	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	78	755	IPR045051	-
	Prci2g3399	761	CDD	PA_subtilisin_like	357	474	-	-
	Prci2g3399	761	ProSitePatterns	Serine proteases, subtilase family, serine active site.	542	552	IPR023828	-
	Prci2g3399	761	SUPERFAMILY	Subtilisin-like	152	605	IPR036852	GO:0004252\|GO:0006508
	Prci2g3399	761	Pfam	Subtilase family	156	580	IPR000209	GO:0006508\|GO:0008236
	Prci2g3399	761	Gene3D	Peptidase S8/S53 domain	157	618	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g3399	Prci-Chr2	43443401	43446507	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g3399	30	757	Subtilisin-like Serine Gene Family	AT5G59100	48.980	0.0	704

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g3399	-		-	pcin:129302788	1496.87