Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3395 ATGACAGTCATGGAAGAATCAGGTGAATTGCAATCAGAAGAGAATAAAGTTTCTATGGAGAAAAATAAGAAAAGAAGGCTTAAAACACCTGCCCAGGTGATGGCCCTGGAAAAATTTTATGATGAGCACAAATATCCCACAGAAGAAATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGACGGTTAAAAGATAAAAGATTGTTGAAGGATGAAGCATGTGCTAATGGACGGCAAGATCGTTCAAGTGGTGTCATCCAGGACCATGTAAGTGGACTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCCTCTACAGCAATGACTTTTCTGTTGCAGATATGACTTATGGACGTAATAGACACTATAATGAAGATGTTGGTGGAACTGATAACACATCTTCTGAGAGTAGCTCGTCTTTAAGAGATCAGATGTTCTCTCAAGGGCAGGATCCATATAACATGGAGCCTTCTAGACATCTGACACCTAACAGAGCTCTGCCACCTTTAGTTCCCAAAGCTGCAATTAACATTGGATATAAACCATCAGGATATTTGAAAGTGAAGGGTGAGATAGAAAATGCTGCTATAACTGCTGTCAAGAAGCGATTAGGAAGACACTATCAGGAAGATGGTCCACTGCTTAGTGTAGAATTTGATCCAGTTCCTCCAGGGGCATTTGAGTGCCAAATTGCAGATCCAGTTGATGAATCATTCCATACTGCGAATCCTTCTCTTGCCAGTCCTACAGAAATTCCTGCTGGGAAAAGGCAACCTGCCCTTAACTCTATGTATGACTCCAAATATAGTTCCCAAGATTTACATATGGAAGTAGGAGATCTTGGCTCCTTGCATGACGCTGATTTGCTGGATAAGAAACCCCGTCGACACAAGCAAGGGCGGACATTTCAGGGTCATACCAATCATATACCTCATAGGAACTCCTCCCTGGAGTTGTATGAAGATTCTACTAGAGAAGTACCTGCTTATAATACAATGAGGTCTAAACATGGTGTAGGGATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTTTGAAGGGGACCTTGTGGTTAAGCAGGCAGATTCACTTCTGCATCGCTATGATAATGTCAATCCAAAGAAAATTCAGAGAAGTGAATATGTAAAATCTAAGCCTTCAAATTCATTAAGAAATTCTCGCGTTTCTCTTGATACTGAAGAAAGAGGACTATCTTCAAAGATAGCAAAGGAAGAGAAGTTTATTGGAGACAAGAAAGCGAGAAAACAATATCATGATTCAGAGAGAATGAGGATGCTTCCAAATGAAACCACGATTGCAAAAAGAGTTAAAGATGATCTTCCTCAACAACAGAATCTGAAACATGCACTAGTAGCTGAGATGCAACCTCAGAAAAATCGGAGGTCTGCAACAGAGATACTTTCTAGCTTTAGTGAAGATGAAACCGCTGAATCCAGTTCCTCGCTGGACTAA 1551 0.4081 MTVMEESGELQSEENKVSMEKNKKRRLKTPAQVMALEKFYDEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDEACANGRQDRSSGVIQDHVSGLGQDSCGSTKHGDYKHLDLKEVESHGLYSNDFSVADMTYGRNRHYNEDVGGTDNTSSESSSSLRDQMFSQGQDPYNMEPSRHLTPNRALPPLVPKAAINIGYKPSGYLKVKGEIENAAITAVKKRLGRHYQEDGPLLSVEFDPVPPGAFECQIADPVDESFHTANPSLASPTEIPAGKRQPALNSMYDSKYSSQDLHMEVGDLGSLHDADLLDKKPRRHKQGRTFQGHTNHIPHRNSSLELYEDSTREVPAYNTMRSKHGVGMRSDSASNHSDHFEGDLVVKQADSLLHRYDNVNPKKIQRSEYVKSKPSNSLRNSRVSLDTEERGLSSKIAKEEKFIGDKKARKQYHDSERMRMLPNETTIAKRVKDDLPQQQNLKHALVAEMQPQKNRRSATEILSSFSEDETAESSSSLD 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3395 516 MobiDBLite consensus disorder prediction 406 429 - -
Prci2g3395 516 MobiDBLite consensus disorder prediction 152 182 - -
Prci2g3395 516 MobiDBLite consensus disorder prediction 147 191 - -
Prci2g3395 516 MobiDBLite consensus disorder prediction 9 28 - -
Prci2g3395 516 CDD homeodomain 23 78 IPR001356 GO:0003677
Prci2g3395 516 Pfam Homeodomain 23 78 IPR001356 GO:0003677
Prci2g3395 516 Gene3D - 11 95 - -
Prci2g3395 516 SMART HOX_1 21 83 IPR001356 GO:0003677
Prci2g3395 516 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 516 - -
Prci2g3395 516 SUPERFAMILY Homeodomain-like 21 87 IPR009057 -
Prci2g3395 516 ProSiteProfiles 'Homeobox' domain profile. 19 79 IPR001356 GO:0003677
Prci2g3395 516 MobiDBLite consensus disorder prediction 490 516 - -
Prci2g3395 516 MobiDBLite consensus disorder prediction 484 516 - -
Prci2g3395 516 MobiDBLite consensus disorder prediction 91 109 - -
Prci2g3395 516 MobiDBLite consensus disorder prediction 1 28 - -
Prci2g3395 516 MobiDBLite consensus disorder prediction 85 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3395 Prci-Chr2 43358137 43365509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3395 6 516 Homeobox Transcription Factor Family AT4G03250 40.217 4.71e-85 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci2g3395 Homeodomain 9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3395 - - gmx:100803515 677.937