Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3379 ATGGCTAACCATAGCTATGGAGTCTCCCTCCCCCAACACTCTCAAACGTCAGATAATATTGAATCCTTTCAACGTAACTCCCAAAACTTCATGGCTACACAGTTCAAATCAACTAGTCATCATCTTTTGGGCGACACTGCTTCCCCATTTGTAGCCCACAATAACCAATCATCACTTTGCCCTGACCAATGCAACACCGTCTCCGGCGGCGGCGGCAAGAGTAACGTCCAAGGTAGTGGCAGCTACTCTGCTAATAGGCACAAAAAACTACTGAAACAAGCACAGAAACCTAAAGGAAGGCCACCTGGCTCCAAGAACAAGCCTAAAGCTCCGATTATAATTTCGAAAATGGATGAAGAAGCTCTGAAGCCTGTAATCATTGAGATCTCAGCCGGTTGTGACGTGGTCAACGAGCTGATAAAGTTTGCTCAAAGTCGTGACTCTGGGCTTACTGTTCTTAACGGGTCTGGCTCTGTAACCAATGTCACTCTTAGCCACACATTTTCCAATGCGCCTTCTTTGACCCTTCATGGAACATTCACTATGCTCTCTCTTTCTGGTACTTTCGTGAAGTCCCATGTTGCTTCACCTTTTGCTTCATCATCGACATTACCAAACCCATCATTGTTGTTTCCTGGATACTCTTCTTTCACGATATGTCTTGCAGGAGCTCAAGGTCAGATCTTTGGAGGAGTGATAGCAGGACGAATCATAGCTGCGAGTCTTGTGGTTGTGGTGGCGACAACATTTAAGAAACCTATGCTTCACAGATGCTTCAGCTCGGAGCCTTTTGCCTCCGTCCTTCAGCTCGGTGAGTTTGGATTTGGGTTTCTGACATATTTTGAAAATTGA 852 0.4566 MANHSYGVSLPQHSQTSDNIESFQRNSQNFMATQFKSTSHHLLGDTASPFVAHNNQSSLCPDQCNTVSGGGGKSNVQGSGSYSANRHKKLLKQAQKPKGRPPGSKNKPKAPIIISKMDEEALKPVIIEISAGCDVVNELIKFAQSRDSGLTVLNGSGSVTNVTLSHTFSNAPSLTLHGTFTMLSLSGTFVKSHVASPFASSSTLPNPSLLFPGYSSFTICLAGAQGQIFGGVIAGRIIAASLVVVVATTFKKPMLHRCFSSEPFASVLQLGEFGFGFLTYFEN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3379 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 123 251 IPR005175 -
Prci2g3379 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 78 258 IPR014476 GO:0003680
Prci2g3379 283 MobiDBLite consensus disorder prediction 1 20 - -
Prci2g3379 283 CDD DUF296 123 248 IPR005175 -
Prci2g3379 283 Gene3D - 122 271 - -
Prci2g3379 283 ProSiteProfiles PPC domain profile profile. 119 271 IPR005175 -
Prci2g3379 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 119 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3379 Prci-Chr2 43223311 43227306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3379 91 262 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.230 5.01e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3379 - - pcin:129302785 560.066