Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3378 ATGGCAGCTCGCTGCTTGAACCCACCCAGGTTATCTAGCACTGAAGATGACACTATGATACTATTTTCAACCTCTAATTCTCCTCAAGACTCCATCTCCATCAGCCCGTCTTCTTCTTCATATCATTCTTCTGTCTCCACTACTTCTGGTAATCATAAACTTTCTGTCACCAATCTCTCCTACACTCTTCACCCACATAAATCCACACCCTTTTCATTCTGTCTCATGCCTCAGAAGCCCAAGCCTCTGCATATACTCAATTCAGTCTCTTTTTCTGCCAAAAGTTCTGAGATTGTTGCTGTTGTTGGTCCTAGTGGCACGGGGAAATCCACTCTTCTTCGTGTCATCGCAGGGCGAGTTAAAGACAAAGACTTTGATCCTAGAAGCATATCGATCAATGATCATCCAATGACAAGTCCAGCTCAGTTGAGGAAGATCTGTGGGTTTGTGGCACAAGAGGATAATTTGCTTCCTCTGTTAACCGTGAAAGAAACCTTAATGTTCAGTGCCAAGTTTAGGCTAAAGGAAATGTCATCAAAGGATAGAGAAGTGAGGGTAGAGACTTTGATGCAAGAGCTTGGGCTGCTTCATGTTGCTGATAGCTATGTTGGAGATGACGAGAATAGAGGGATTTCTGGTGGGGAGAGGAAAAGGGTATCTATAGGTTCTGATATGATTCATAATCCTCCTATTTTGGTCCTAGATGAGCCAACCTCAGGCCTAGACAGTTCTTCAGCTCTTCAAGTGATAGAACTTCTTTCATTGATGGTTCAGTCAAAGAGAAGGATAGTGATTCTTTCAATTCACCAACCCAGCTATAGAATATTGCAGTACATTTCTAGGTTCTTGATCCTGTCTCATGGCTCAGTTGTGCACAACGGTAGCCTGAGATCACTTGAGAAAACCATTACCAGGTTGGGATTTCAGATTCCAATGCAACTCAATGCTTTAGAGTTTGCCATGGAAATTATACAGAGATTGGAAGATTCAAAAATTTCCACTTATGATAATGACATTTGTCCCGTGCAAGACAAGGAAGAAGAAACTGGTGAGGTTCATAATTACACAAGTGATGATAACAGCAAAAAGATTTGCAGTGCCTGGTATTGGAGCTTGATTGAGATCTTGTTTCTCTGCTCAAGATTTTGGAAGGTCATTTACAGAACAAAGCAGCTTTTCTTGGCCAGAACAATGCAAGCTCTAGTTGGCGGGTTTGGGCTTGGAAGTGTTTACATAAAGGTGAGGAAGGATGAAGGAGGAGTTGCAGAAAGACTAGGCCTGTTTGCATTTAGCCTGAGCTTTCTGCTTTCTTCCACAGTTGAAGCACTTCCAATATTCCTTCAAGAGAGATGTGTTCTAATGAAAGAAGCCTCAAGAGGAGCATACAAAATTTCCTCTTACATGGTGGCAAACACTCTTGTCTTCTTTCCTTTCTTGTTTGTAGTGTCCATACTTTTCTCAGTCCCTGTGTACTGGATCGTAGGTCTCAACCCGTCCTTCTCAGCCTTTGCCTTCTTCATCTTCATCGTCTGGCTTATAGTGCTCATGGTACCCTCTGGATGCATTACTCACAAATGA 1578 0.4246 MAARCLNPPRLSSTEDDTMILFSTSNSPQDSISISPSSSSYHSSVSTTSGNHKLSVTNLSYTLHPHKSTPFSFCLMPQKPKPLHILNSVSFSAKSSEIVAVVGPSGTGKSTLLRVIAGRVKDKDFDPRSISINDHPMTSPAQLRKICGFVAQEDNLLPLLTVKETLMFSAKFRLKEMSSKDREVRVETLMQELGLLHVADSYVGDDENRGISGGERKRVSIGSDMIHNPPILVLDEPTSGLDSSSALQVIELLSLMVQSKRRIVILSIHQPSYRILQYISRFLILSHGSVVHNGSLRSLEKTITRLGFQIPMQLNALEFAMEIIQRLEDSKISTYDNDICPVQDKEEETGEVHNYTSDDNSKKICSAWYWSLIEILFLCSRFWKVIYRTKQLFLARTMQALVGGFGLGSVYIKVRKDEGGVAERLGLFAFSLSFLLSSTVEALPIFLQERCVLMKEASRGAYKISSYMVANTLVFFPFLFVVSILFSVPVYWIVGLNPSFSAFAFFIFIVWLIVLMVPSGCITHK 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3378 525 Gene3D - 77 324 IPR027417 -
Prci2g3378 525 Pfam ABC-2 type transporter 269 342 IPR043926 GO:0140359
Prci2g3378 525 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 35 517 - -
Prci2g3378 525 FunFam ABC transporter G family member 23 77 310 - -
Prci2g3378 525 SMART AAA_5 95 297 IPR003593 GO:0016887
Prci2g3378 525 MobiDBLite consensus disorder prediction 26 47 - -
Prci2g3378 525 Pfam ABC-2 type transporter 375 516 IPR013525 GO:0016020|GO:0140359
Prci2g3378 525 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 312 IPR003439 GO:0005524
Prci2g3378 525 Pfam ABC transporter 86 239 IPR003439 GO:0005524
Prci2g3378 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 304 IPR027417 -
Prci2g3378 525 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3378 Prci-Chr2 43216054 43218515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3378 67 302 Calmodulin-binding Proteins AT2G36910 26.506 1.06e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3378 K05681 - gmx:100783883 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g3378 2 43216054 43218515 Prci2g3378 2 43216054 43218515 ECH