Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3377 ATGGCAGCTCGCTGCTTGAACCCACCCAGGTTATCTAGCACTGAAGATGACACTATGATACTATTTTCAACCTCTAATTCTCCTCAAGACTCCATCTCCATCAGCCCGTCTTCTTCTTCATATCATTCTTCTGTCTCCACTACTTCTGGTAATCATAAACTTTCTGTCACCAATCTCTCCTACACTCTTCACCCACATAAATCCACACCCTTTTCATTCTGTCTCATGCCTCAGAAGCCCAAGCCTCTGCATATACTCAATTCAGTCTCTTTTTCTGCCAAAAGTTCTGAGATTGTTGCTGTTGTTGGTCCTAGTGGCACGGGGAAATCCACTCTTCTTCGTGTCATCGCAGGGCGAGTTAAAGACAAAGACTTTGATCCTAGAAGCATATCGATCAATGATCATCCAATGACAAGTCCAGCTCAGTTGAGGAAGATCTGTGGGTTTGTGGCACAAGAGGATAATTTGCTTCCTCTGTTAACCGTGAAAGAAACCTTAATGTTCAGTGCCAAGTTTAGGCTAAAGGAAATGTCATCAAAGGATAGAGAAGTGAGGGTAGAGACTTTGATGCAAGAGCTTGGGCTGCTTCATGTTGCTGATAGCTATGTTGGAGATGACGAGAATAGAGGGATTTCTGGTGGGGAGAGGAAAAGGGTATCTATAGGTTCTGATATGATTCATAATCCTCCTATTTTGGTCCTAGATGAGCCAACCTCAGGCCTAGACAGTTCTTCAGCTCTTCAAGTGATAGAACTTCTTTCATTGATGGTTCAGTCAAAGAGAAGGATAGTGATTCTTTCAATTCACCAACCCAGCTATAGAATATTGCAGTACATTTCTAGGTTCTTGATCCTGTCTCATGGCTCAGTTGTGCACAACGGTAGCCTGAGATCACTTGAGAAAACCATTACCAGGTTGGGATTTCAGATTCCAATGCAACTCAATGCTTTAGAGTTTGCCATGGAAATTATACAGAGATTGGAAGATTCAAAAATTTCCACTTATGATAATGACATTTGTCCCGTGCAAGACAAGGAAGAAGAAACTGGTGAGGTTCATAATTACACAAGTGATGATAACAGCAAAAAGATTTGCAGTGCCTGGTATTGGAGCTTGATTGAGATCTTGTTTCTCTGCTCAAGATTTTGGAAGGTCATTTACAGAACAAAGCAGCTTTTCTTGGCCAGAACAATGCAAGCTCTAGTTGGCGGGTTTGGGCTTGGAAGTGTTTACATAAAGGTGAGGAAGGATGAAGGAGGAGTTGCAGAAAGACTAGGCCTGTTTGCATTTAGCCTGAGCTTTCTGCTTTCTTCCACAGTTGAAGCACTTCCAATATTCCTTCAAGAGAGATGTGTTCTAATGAAAGAAGCCTCAAGAGGAGCATACAAAATTTCCTCTTACATGGTGGCAAACACTCTTGTCTTCTTTCCTTTCTTGTTTGTAGTGTCCATACTTTTCTCAGTCCCTGTGTACTGGATCGTAGGTCTCAACCCGTCCTTCTCAGCCTTTGCCTTCTTCATCTTCATCGTCTGGCTTATAGTGCTCATGGCAAGTTCTCTGGTTCTCTTCTTAAGTGCAATATCTCCTGATTTCATTTCTGGGAACTCCATGATCTGCACTGTGCTGGGAGCATTCTTTCTATTCTCAGGATACTTCATTCCAAAAGAGAGCATCCCCAAGTACTGGATTTTCATGTACTATGTGTCACTGTATAGGTACCCTCTGGATGCATTACTCACAAATGAGTATTGGAATGTTAAGAGCGAGTGTTTCTCAGAAGGAGAATCAGATTGCTTGCTTACTGGTTTTGACGTGCTCAAGAGTAGAGGACTTGATACAGATACAAGGTGGATGAATGTGAGCATCATGCTTGGCTTCTTTGTTCTGTATCGTGTGCTTTGTTGGGCTATTCTTGCTAGAAAGGCTTCCAAGGCAACCATATAG 1944 0.4239 MAARCLNPPRLSSTEDDTMILFSTSNSPQDSISISPSSSSYHSSVSTTSGNHKLSVTNLSYTLHPHKSTPFSFCLMPQKPKPLHILNSVSFSAKSSEIVAVVGPSGTGKSTLLRVIAGRVKDKDFDPRSISINDHPMTSPAQLRKICGFVAQEDNLLPLLTVKETLMFSAKFRLKEMSSKDREVRVETLMQELGLLHVADSYVGDDENRGISGGERKRVSIGSDMIHNPPILVLDEPTSGLDSSSALQVIELLSLMVQSKRRIVILSIHQPSYRILQYISRFLILSHGSVVHNGSLRSLEKTITRLGFQIPMQLNALEFAMEIIQRLEDSKISTYDNDICPVQDKEEETGEVHNYTSDDNSKKICSAWYWSLIEILFLCSRFWKVIYRTKQLFLARTMQALVGGFGLGSVYIKVRKDEGGVAERLGLFAFSLSFLLSSTVEALPIFLQERCVLMKEASRGAYKISSYMVANTLVFFPFLFVVSILFSVPVYWIVGLNPSFSAFAFFIFIVWLIVLMASSLVLFLSAISPDFISGNSMICTVLGAFFLFSGYFIPKESIPKYWIFMYYVSLYRYPLDALLTNEYWNVKSECFSEGESDCLLTGFDVLKSRGLDTDTRWMNVSIMLGFFVLYRVLCWAILARKASKATI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3377 647 Gene3D - 77 323 IPR027417 -
Prci2g3377 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 304 IPR027417 -
Prci2g3377 647 FunFam ABC transporter G family member 23 77 310 - -
Prci2g3377 647 Pfam ABC transporter 86 239 IPR003439 GO:0005524
Prci2g3377 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 35 632 - -
Prci2g3377 647 SMART AAA_5 95 297 IPR003593 GO:0016887
Prci2g3377 647 MobiDBLite consensus disorder prediction 26 47 - -
Prci2g3377 647 Pfam ABC-2 type transporter 375 583 IPR013525 GO:0016020|GO:0140359
Prci2g3377 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 312 IPR003439 GO:0005524
Prci2g3377 647 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3377 Prci-Chr2 43215274 43218512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3377 67 302 Calmodulin-binding Proteins AT2G36910 26.506 9.81e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3377 K05681 - gmx:100783883 963.755