Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3364 ATGAAAGTTCTAACGACCACATATAGCCTAAAAGTAAAGGAGCTAGGGCCATTCGGGGTGACACATTTAATTACGCACAAAACAACATTGGAGCAATTTGCATGCAAGACCATAGTCAAGAGAAAGCTTGTGAACGACGGGGATATAGAAGATATATGTAGGGAGGTTCAGATCATGCACCATTTGGCTAGCCAGCCTAATATTGTGGAGCTCAAAAGTGTATATAAGTACAAGCATGTGATTCATCTTGTCATGGAGCTCTGCACCGGTAGCGAGCTCTTCTACCGGATCACAGCCAAGCAGTATTACTTCGAGCGAGCTGCCGCATTGTTGTTAAGGACTATAGTTCAGATCGTCCATACTTGCCATTCCATAGGTGTCATACATAGAGATGTTAAGCTTGAGAATTTCCTCTTTCTTAATAAGGACAAGAATTCTCCTCTTAAACTCATCGATTTCGATTTATCCTTTTTTACAAGCAAGGCTGACGCTGATGGCAATGGAACCATAGATTATAAGGAGTTTATCACAGCAACATTGAATTTGAATCGAATCGACAAAGAAGAACATCTTTATATTGCTTTCCAATACTTTGATAAAGACAACAACAGGTTCATTACCGTTGAAGAACTAGAACATGGTCTCAAAGAATATAACACGCATGATGGTAGAGACATCAACGAGATATTATCAGAAGTTGATGCAAATAACACTGATTGTGATGGACCCCATGGCATGAATGATATGACGTTAATGACAATGAAGCTTAAGGATGGTAATCATGAACATGGTGGCATGAAAGGAGCCCAAAGCAAGGAATAA 822 0.3978 MKVLTTTYSLKVKELGPFGVTHLITHKTTLEQFACKTIVKRKLVNDGDIEDICREVQIMHHLASQPNIVELKSVYKYKHVIHLVMELCTGSELFYRITAKQYYFERAAALLLRTIVQIVHTCHSIGVIHRDVKLENFLFLNKDKNSPLKLIDFDLSFFTSKADADGNGTIDYKEFITATLNLNRIDKEEHLYIAFQYFDKDNNRFITVEELEHGLKEYNTHDGRDINEILSEVDANNTDCDGPHGMNDMTLMTMKLKDGNHEHGGMKGAQSKE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3364 273 ProSitePatterns EF-hand calcium-binding domain. 163 175 IPR018247 -
Prci2g3364 273 Gene3D - 188 263 - -
Prci2g3364 273 Pfam Protein kinase domain 16 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3364 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Prci2g3364 273 Gene3D Phosphorylase Kinase; domain 1 11 93 - -
Prci2g3364 273 ProSiteProfiles EF-hand calcium-binding domain profile. 186 221 IPR002048 GO:0005509
Prci2g3364 273 SUPERFAMILY Protein kinase-like (PK-like) 16 162 IPR011009 -
Prci2g3364 273 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Prci2g3364 273 ProSiteProfiles EF-hand calcium-binding domain profile. 161 185 IPR002048 GO:0005509
Prci2g3364 273 ProSiteProfiles Protein kinase domain profile. 7 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3364 273 SMART efh_1 190 218 IPR002048 GO:0005509
Prci2g3364 273 SMART efh_1 154 182 IPR002048 GO:0005509
Prci2g3364 273 Pfam EF hand 161 177 IPR002048 GO:0005509
Prci2g3364 273 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 161 - -
Prci2g3364 273 SMART serkin_6 9 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3364 273 Gene3D Transferase(Phosphotransferase) domain 1 94 187 - -
Prci2g3364 273 SUPERFAMILY EF-hand 148 238 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3364 Prci-Chr2 43051051 43066662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3364 149 237 EF-hand Containing Proteins AT5G12180 59.551 7.35e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci2g3364 Pkinase 3.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3364 K13412 - pcin:129302784 557.755