Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3363 ATGATGAGCAACACTTGCTCCACCAACACCACCACCACCAATGGCAGCCATGCTGAGGCCGGCTCCGATGACGAGATCTTTGCCGAACCCATGGAGGTTCTAACGACGACTCATACCGTAGGAAAAGAGATAGGGCGAGGCAGAACCGGGCCGACGTATTTGTGTGCACACAAGGTAACCGGCGAACTGTTTGCATGCAAAACCATAGTCAAGATGAAGCTTAGGAAAAATGACACAGATGATGTACTTAGGAGCGTACAAATCATGCACCATTTGGCCGGCCAGCCTAATATTGTACAACTGAAAGGTTTGTACGAGGACGGTGATTCGGTTCGTGTTGTGAAGGAGCTCTGTGCCGGTGGCGAGATCCTCGACCGGATCATTGCCAAGGGTTATCACACCGAGCGAGCCGCGGCGTCGCTGTTGAGGAACATGATTCAAGCCATCCATAGTTGTCACACCATGGGCGTCATGCATAGAGATATTAAACTTGAGAATTTCATGTTTCTTAATAACGACGAGAATTCTCCCCTCAAACTCGTTGATTTCAATCTATCTTCTTTTCACAGGCAAGGAGAGATGTTTGACTTGGTCACTGGGAGTCCAAGTTACGTGGCACCCGAGGTGTTGAAGAAGAAATACGGCCCAGAAATTGACATTTGGAGTGCTGGGGCTGCGCTTTACACTCTTCTTTACGGTGTTCCTCCATTTTGGCCAGAAACTGAAAGGGGAAAAATGAAGAAAATGGTGGAAGGCCAATATGACTTGTCAAGTGATCCATGGCCAAGCATATCTGCTTCAGCAAAGGGCCTTGTCACCAAAATGTTGAGTTTTGATCCCAAGCAGAGGCCCACAGCGTATCAAGTCCTAAATCATCCATGGATAAAGGAAGATGGAGAAGCAGCAGATAAACCTCTTGACAATATTGTGATGAATAGGTTCAAGCTGTTAAGAGCATATAAGTTCTTCCATATTGGAGTAGATTGTAATATTGGCGAGATTCATCGTCTCTCATTTAACTGA 1023 0.4653 MMSNTCSTNTTTTNGSHAEAGSDDEIFAEPMEVLTTTHTVGKEIGRGRTGPTYLCAHKVTGELFACKTIVKMKLRKNDTDDVLRSVQIMHHLAGQPNIVQLKGLYEDGDSVRVVKELCAGGEILDRIIAKGYHTERAAASLLRNMIQAIHSCHTMGVMHRDIKLENFMFLNNDENSPLKLVDFNLSSFHRQGEMFDLVTGSPSYVAPEVLKKKYGPEIDIWSAGAALYTLLYGVPPFWPETERGKMKKMVEGQYDLSSDPWPSISASAKGLVTKMLSFDPKQRPTAYQVLNHPWIKEDGEAADKPLDNIVMNRFKLLRAYKFFHIGVDCNIGEIHRLSFN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3363 340 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3363 340 Gene3D Phosphorylase Kinase; domain 1 39 123 - -
Prci2g3363 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Prci2g3363 340 Pfam Protein kinase domain 40 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3363 340 FunFam Maternal embryonic leucine zipper kinase 30 318 - -
Prci2g3363 340 MobiDBLite consensus disorder prediction 1 21 - -
Prci2g3363 340 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 319 - -
Prci2g3363 340 MobiDBLite consensus disorder prediction 1 19 - -
Prci2g3363 340 CDD STKc_CAMK 39 294 - -
Prci2g3363 340 Gene3D Transferase(Phosphotransferase) domain 1 124 325 - -
Prci2g3363 340 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3363 340 SUPERFAMILY Protein kinase-like (PK-like) 29 312 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3363 Prci-Chr2 43040810 43045380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3363 26 323 EF-hand Containing Proteins AT5G12180 62.876 4.86e-138 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci2g3363 Pkinase 1.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3363 K13412 - nnu:104590488 405.216