Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3350 ATGGCTACGGGAGCTTATTTGCCAAATGAACTGCAAAGGGGTGAAAATAAGCCGAAGAATGTAGCAGCAGAAGGACGGAATCGACGTGTTCTCCAGGATATTGGGAATCTTGTGTATGTTTCTAAGCGCATCACAAGGCAAGAAGCAGACAAGAACAAGAAACCAAGCTTTGCAACAACAAAAATATTAGCAGCAGGGAAGACTGTTCACCCAGAAGAACGTGAAGTTATTATAATTAGCTCTGATGAAGAAAGTGAGGAAGGAAAGGAGAAGGAGAAGGAGAAGGAACCAGGTAAAGCAAGGAATACAAGACAGCACTCAGCTAAGAAGAATGTGAAGACCCTCAGTGCAATCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACGTACTTACAAGCAAAAGGACCACGTGGTAGACGTTGATGCAGCCGACATTGACAATGAATTGGCAGCTGTTGAGTACATTGACGAACTCTACAAGTTCTACAAATTTGCAGAAGATGATAGCCGTGTGCATGATTACTTGGGATCGCAGCCTGATGTGAATGCCAAGATGAGAGCAATCCTTGTGGACTGGTTGATAGAAGTACATCGTAAATTTGAACTCATGCCTGAAACTCTTCATCTGACAATAAACATTGTGGATCGCTTCCTTTCCATGAAGGTTGTGTCCAGAAAGGAGCTTCAGCTGGTTGGCATCAGCTCCATGCTCTTAGCCTGCAAATATGAGGAGATTTGGGCTCCAGAGGTGAATGACTTTGTGTGCATATCAGACAACGCCTATAAAAGAGAACAGATTCTGGTGATGGAGAAGACAATCTTGAGGAAGCTGGAATGGTATTTAACTGTTCCTACACCATATGTCTTCCTTGTTCGTTATATCAAAGCCTCTTCTCCCACTGATAAGGAGATGGAGAACATGGCGCATTTCCTGGCAGAACTGAGCTTAATTCACTATGCCACAGTAATGTTGTATAGCCCTTCTGTTGTTGCTGCTTCTGCTGTGTATGCTGCTCGGTGCACACTTGATAGGAGCCCTTTCTGGACTGAGACTTTAAAACATTACACAGGCTTTTCTGAGGACCAACTAAGGGAATGTGCCAAGCTCATGGTGAGCTTTCACTCACTGGCTGGTGAAAGCAAGTTGAAAGCAGTGTACAAAAAATTCTGCAATCCAGATCGCTGTGCAGTTGCTCTTCTTCCCCCAGCAAGAAGCTTGTTAATTCCACATGAACAGATTTGA 1242 0.4428 MATGAYLPNELQRGENKPKNVAAEGRNRRVLQDIGNLVYVSKRITRQEADKNKKPSFATTKILAAGKTVHPEEREVIIISSDEESEEGKEKEKEKEPGKARNTRQHSAKKNVKTLSAILSARSKAACGRTYKQKDHVVDVDAADIDNELAAVEYIDELYKFYKFAEDDSRVHDYLGSQPDVNAKMRAILVDWLIEVHRKFELMPETLHLTINIVDRFLSMKVVSRKELQLVGISSMLLACKYEEIWAPEVNDFVCISDNAYKREQILVMEKTILRKLEWYLTVPTPYVFLVRYIKASSPTDKEMENMAHFLAELSLIHYATVMLYSPSVVAASAVYAARCTLDRSPFWTETLKHYTGFSEDQLRECAKLMVSFHSLAGESKLKAVYKKFCNPDRCAVALLPPARSLLIPHEQI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3350 413 FunFam G2/mitotic-specific cyclin-1 272 398 - -
Prci2g3350 413 Pfam Cyclin, C-terminal domain 284 402 IPR004367 -
Prci2g3350 413 Gene3D - 171 282 - -
Prci2g3350 413 SUPERFAMILY Cyclin-like 146 281 IPR036915 -
Prci2g3350 413 MobiDBLite consensus disorder prediction 1 27 - -
Prci2g3350 413 ProSitePatterns Cyclins signature. 186 217 IPR006671 -
Prci2g3350 413 SMART cyclin_7 191 275 IPR013763 -
Prci2g3350 413 SMART cyclin_7 288 372 IPR013763 -
Prci2g3350 413 Pfam Cyclin, N-terminal domain 169 281 IPR006671 -
Prci2g3350 413 CDD CYCLIN_AtCycB-like_rpt1 134 279 - -
Prci2g3350 413 MobiDBLite consensus disorder prediction 78 109 - -
Prci2g3350 413 Gene3D - 158 398 - -
Prci2g3350 413 SUPERFAMILY Cyclin-like 285 406 IPR036915 -
Prci2g3350 413 PIRSF Cyclin_A_B_D_E 41 413 IPR046965 GO:0016538|GO:0044772
Prci2g3350 413 PIRSF Cyclin_A_B_D_E 6 65 IPR046965 GO:0016538|GO:0044772
Prci2g3350 413 PANTHER CYCLINS 101 388 IPR039361 -
Prci2g3350 413 SMART Cyclin_C_2 284 403 IPR004367 -
Prci2g3350 413 MobiDBLite consensus disorder prediction 78 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3350 Prci-Chr2 42812994 42816152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3350 14 401 Core Cell Cycle Gene Families AT2G26760 55.897 1.93e-148 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3350 K21777 - qsa:O6P43_014681 499.975