Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3349 ATGGCTACGGGAGCTTATTTGCCAAATGAACTGCAAAGGGGTGAAAATAAGCCGAAGAATGTAGCAGCAGAAGGACGGAATCGACGTGTTCTCCAGGATATTGGGAATCTTGTGCAAGAAGCAGACAAGAACAAGAAACCAAGCTTTGCAACAACAAAAATATTAGCAGCAGGGAAGACTGTTCACCCAGAAGAACGTGAAGTTATTATAATTAGCTCTGATGAAGAAAGTGAGGAAGGAAAGGAGAAGGAGAAGGAGAAGGAACCAGGTAAAGCAAGGAATACAAGACAGCACTCAGCTAAGAAGAATGTGAAGACCCTCAGTGCAATCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACGTACTTACAAGCAAAAGGACCACGTGGTAGACGTTGATGCAGCCGACATTGACAATGAATTGGCAGCTGTTGAGTACATTGACGAACTCTACAAGTTCTACAAATTTGCAGAAGATGATAGCCGTGTGCATGATTACTTGGGATCGCAGCCTGATGTGAATGCCAAGATGAGAGCAATCCTTGTGGACTGGTTGATAGAAGTACATCGTAAATTTGAACTCATGCCTGAAACTCTTCATCTGACAATAAACATTGTGGATCGCTTCCTTTCCATGAAGGTTGTGTCCAGAAAGGAGCTTCAGCTGGTTGGCATCAGCTCCATGCTCTTAGCCTGCAAATATGAGGAGATTTGGGCTCCAGAGGTGAATGACTTTGTGTGCATATCAGACAACGCCTATAAAAGAGAACAGATTCTGGTGATGGAGAAGACAATCTTGAGGAAGCTGGAATGGTATTTAACTGTTCCTACACCATATGTCTTCCTTGTTCGTTATATCAAAGCCTCTTCTCCCACTGATAAGGAGATGGAGAACATGGCGCATTTCCTGGCAGAACTGAGCTTAATTCACTATGCCACAGTAATGTTGTATAGCCCTTCTGTTGTTGCTGCTTCTGCTGTGTATGCTGCTCGGTGCACACTTGATAGGAGCCCTTTCTGGACTGAGACTTTAAAACATTACACAGGCTTTTCTGAGGACCAACTAAGGGAATGTGCCAAGCTCATGGTGAGCTTTCACTCACTGGCTGGTGAAAGCAAGTTGAAAGCAGTGTACAAAAAATTCTGCAATCCAGATCGCTGTGCAGTTGCTCTTCTTCCCCCAGCAAGAAGCTTGTTAATTCCACATGAACAGATTTGA 1218 0.4433 MATGAYLPNELQRGENKPKNVAAEGRNRRVLQDIGNLVQEADKNKKPSFATTKILAAGKTVHPEEREVIIISSDEESEEGKEKEKEKEPGKARNTRQHSAKKNVKTLSAILSARSKAACGRTYKQKDHVVDVDAADIDNELAAVEYIDELYKFYKFAEDDSRVHDYLGSQPDVNAKMRAILVDWLIEVHRKFELMPETLHLTINIVDRFLSMKVVSRKELQLVGISSMLLACKYEEIWAPEVNDFVCISDNAYKREQILVMEKTILRKLEWYLTVPTPYVFLVRYIKASSPTDKEMENMAHFLAELSLIHYATVMLYSPSVVAASAVYAARCTLDRSPFWTETLKHYTGFSEDQLRECAKLMVSFHSLAGESKLKAVYKKFCNPDRCAVALLPPARSLLIPHEQI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3349 405 SMART Cyclin_C_2 276 395 IPR004367 -
Prci2g3349 405 FunFam G2/mitotic-specific cyclin-1 264 390 - -
Prci2g3349 405 MobiDBLite consensus disorder prediction 1 27 - -
Prci2g3349 405 Gene3D - 163 274 - -
Prci2g3349 405 SUPERFAMILY Cyclin-like 138 273 IPR036915 -
Prci2g3349 405 CDD CYCLIN_AtCycB-like_rpt1 126 271 - -
Prci2g3349 405 SUPERFAMILY Cyclin-like 277 398 IPR036915 -
Prci2g3349 405 Pfam Cyclin, C-terminal domain 276 394 IPR004367 -
Prci2g3349 405 ProSitePatterns Cyclins signature. 178 209 IPR006671 -
Prci2g3349 405 PANTHER CYCLINS 93 380 IPR039361 -
Prci2g3349 405 Pfam Cyclin, N-terminal domain 161 273 IPR006671 -
Prci2g3349 405 Gene3D - 150 390 - -
Prci2g3349 405 MobiDBLite consensus disorder prediction 70 102 - -
Prci2g3349 405 MobiDBLite consensus disorder prediction 70 95 - -
Prci2g3349 405 SMART cyclin_7 280 364 IPR013763 -
Prci2g3349 405 SMART cyclin_7 183 267 IPR013763 -
Prci2g3349 405 PIRSF Cyclin_A_B_D_E 41 405 IPR046965 GO:0016538|GO:0044772
Prci2g3349 405 PIRSF Cyclin_A_B_D_E 5 56 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3349 Prci-Chr2 42812994 42816153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3349 14 393 Core Cell Cycle Gene Families AT2G26760 57.031 1.33e-149 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3349 K21777 - qsa:O6P43_014681 499.204