Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g3327 | ATGGCATACTGTGTTCAAGGAGAATCTTCCTCAGGCTCAAACTCTGGAACTTCTAATTCAACTCTGAAAAGGAAATATGACGTTTTCTTGAGTTTCGCTGGACAAGATACTCGCTTGAATTTTACAGATCACTTGTATGCTGCTTTTGTTAGAAGTGGGATCAGAGCTTTTAGGGATAAGGAAGGAATGGAGAGAGGAGAAGTTATATCACAACAACTCCTTCAAGCAATTGAAGATTCTCCCTGTGCAGTTGTTGTACTCTCTGAAAATTATGCAAATTCTACCTGGTGTTTGGATGAACTCCAAAAGATCCTTGAATGTAGAAATAAATCAGGTCAGCAAGTTTTCCCTATTTTTTATAGTGTAGATCCATCTGACATAAGACACCAAAGAAAAAGTTATGGTGAAGCTCTCGTTAAACATGAAGAGAGATTTAGAGAAAACAAACATAAGGTGCAGAAATGGAGGAACGCTTTATCACTGGTGAGCGACTTGTCTGGCTGGGACACTAGGGGCCGGCCAGAAACAGAGATAGAGTTAGATGATGTTCGATTTGTGGGGATATGGGGTATGGGAGGGATAGGTAAAACAACACTTGCTAGAATTGTTTATGAAAGAATCTCCAGCCAGTTTGAAATGTGTTGCTTTTTGTCCAACATTCGAGAGGTTTCAGAAAGAGAAGATCCAGTTCATGCACAAAGACATCTTCTTTCGCATCTCAACATAAGTAATGAGGTAATCATGAACAAGCATGAAGGAAAAGCCATTCTAAGAAACCTTTTTTGCAGCAAAAAGGTGCTCCTTGTGCTTGATGATGTAACTCACATGAGTCAATTAGAGAATATGGCTGAAAGTCCAAAGTGGTTTGGTATGGGGAGCAGAGTAATTATAACAACAAGAGATATGCACTTGTTGAGATCTCTTGGTGTGCATGGAATATATCAACTTGAAACCATGCAGAAAGATGAATCTCTTCAACTCTTTTCTAGGAAAGCATTTAGAAAAGATTATCCTGAAAGCAATTACTTGATGTTGTCTGAATCTGTGGTTAAATATGCCGGAGGTCTTCCTTTGGCACTCCATGTTCTAGGTTCTTTTTTGTGTGGAAGAAGTGTACCTGAGTGGGAAGATGCTTTAGACAGGCTAAAGGAAATTCCAGAAGATAATATTATTCGAAAACTTAAAATAAGTTATGATGCATTAAATTATCAAGAAAAGGCAATATTTTTGGATATTGCTTGTTTTTTCAATGGATGGATGAAATATGAAGTGACCCAAATTTTGAGAAACTGTGATCTCCACCCTACAATTGGAATAAATGTTTTGATTGAGAAAGCTTTACTAATTGAAAAGAAGAATATGTATGGAAAATGCATTTTAGAGATGCACGATTTACTTCAAGAATTGGGTCGGAATATTGTTTTCCAAGAATCTCTTGATAATGCTGGCAGACGTAGTAGGTTGTGGAATATAGAGGACATCAATGAAATATTGAAAGATAACGCAGGATCAAATGCAATACATGCCATTGTTACGCTTTCCCATGCTGAAGTAGAAGTGCATCCTGAAGTATTTTCAAAGATGAGAAATCTCAGACTTCTCTACTTAGACTGTGGATTGAAACATCCTATAGATTTCAAATGCCTTTCCAATGCATTAAAAGTAATTGTGTGGTTGCATTGTCCACTAGAAGCTCTTCCACTTGAAATTCCACTGCATAAACTTGTTGATATTCAGATGCCTTATAGCAACATAAAGCAACTCTGGAATGGTGTAAAGTTTATGAAGAACTTGAAGCATATTGATATGAGTTATTCTAAAGATTTGACTGAAACTCCAAATTTCTCAGGAGTTCCAAATTTAGAAAATTTAATTCTTGAATGGTGTATATCCCTCATTGTGGTTCATCCCTCGCTTGGAGAGTTGAAAAAACTTGTTGAAGTGGACTTGCATGGATGTATAAGACTTGAAATCCTTCCAAGAAAATTGGAGATGAATTCATTGATAAAGTTGGATCTTGGTTATTGTTATGAAATCTCAATGCTTCCAGAGTTTGGGGAATGCATGAAGAAATTATCTTTGCTTGATGCAAGTTGCACTGCTATAACCAAACTTCCTGAATCACTGGGATTCTTAACTGGTCTGCAAGATTTGGGATTGAGTGGCTGCGAAAATATTGATCTTCATCCCTTTACTGTCAAAAAGTTGTTGGGCTTTAATCTAATGTCATTAACAGAGTTAAACTTAAGCAACTGTGGCATTAGTGATGGATCATTCCTGATGATTTTGGGGGCTTAA | 2298 | 0.3695 | MAYCVQGESSSGSNSGTSNSTLKRKYDVFLSFAGQDTRLNFTDHLYAAFVRSGIRAFRDKEGMERGEVISQQLLQAIEDSPCAVVVLSENYANSTWCLDELQKILECRNKSGQQVFPIFYSVDPSDIRHQRKSYGEALVKHEERFRENKHKVQKWRNALSLVSDLSGWDTRGRPETEIELDDVRFVGIWGMGGIGKTTLARIVYERISSQFEMCCFLSNIREVSEREDPVHAQRHLLSHLNISNEVIMNKHEGKAILRNLFCSKKVLLVLDDVTHMSQLENMAESPKWFGMGSRVIITTRDMHLLRSLGVHGIYQLETMQKDESLQLFSRKAFRKDYPESNYLMLSESVVKYAGGLPLALHVLGSFLCGRSVPEWEDALDRLKEIPEDNIIRKLKISYDALNYQEKAIFLDIACFFNGWMKYEVTQILRNCDLHPTIGINVLIEKALLIEKKNMYGKCILEMHDLLQELGRNIVFQESLDNAGRRSRLWNIEDINEILKDNAGSNAIHAIVTLSHAEVEVHPEVFSKMRNLRLLYLDCGLKHPIDFKCLSNALKVIVWLHCPLEALPLEIPLHKLVDIQMPYSNIKQLWNGVKFMKNLKHIDMSYSKDLTETPNFSGVPNLENLILEWCISLIVVHPSLGELKKLVEVDLHGCIRLEILPRKLEMNSLIKLDLGYCYEISMLPEFGECMKKLSLLDASCTAITKLPESLGFLTGLQDLGLSGCENIDLHPFTVKKLLGFNLMSLTELNLSNCGISDGSFLMILGA | 765 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g3327 | 765 | PRINTS | Disease resistance protein signature | 260 | 274 | - | - | |
Prci2g3327 | 765 | PRINTS | Disease resistance protein signature | 353 | 367 | - | - | |
Prci2g3327 | 765 | PRINTS | Disease resistance protein signature | 185 | 200 | - | - | |
Prci2g3327 | 765 | PRINTS | Disease resistance protein signature | 593 | 609 | - | - | |
Prci2g3327 | 765 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 26 | 751 | IPR044974 | GO:0006952 | |
Prci2g3327 | 765 | ProSiteProfiles | TIR domain profile. | 24 | 184 | IPR000157 | GO:0007165 | |
Prci2g3327 | 765 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 320 | 402 | - | - | |
Prci2g3327 | 765 | SMART | till_3 | 25 | 165 | IPR000157 | GO:0007165 | |
Prci2g3327 | 765 | Gene3D | - | 168 | 310 | IPR027417 | - | |
Prci2g3327 | 765 | Pfam | TIR domain | 25 | 161 | IPR000157 | GO:0007165 | |
Prci2g3327 | 765 | Pfam | Leucine Rich Repeat | 574 | 593 | IPR011713 | - | |
Prci2g3327 | 765 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 178 | 412 | IPR027417 | - | |
Prci2g3327 | 765 | Gene3D | - | 318 | 402 | IPR042197 | - | |
Prci2g3327 | 765 | SUPERFAMILY | L domain-like | 462 | 756 | - | - | |
Prci2g3327 | 765 | Gene3D | - | 2 | 162 | IPR035897 | - | |
Prci2g3327 | 765 | Pfam | NB-ARC domain | 181 | 388 | IPR002182 | GO:0043531 | |
Prci2g3327 | 765 | Gene3D | Ribonuclease Inhibitor | 683 | 763 | IPR032675 | - | |
Prci2g3327 | 765 | Gene3D | Ribonuclease Inhibitor | 501 | 682 | IPR032675 | - | |
Prci2g3327 | 765 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 18 | 168 | IPR035897 | - | |
Prci2g3327 | 765 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 22 | 183 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g3327 | Prci-Chr2 | 42326086 | 42333798 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g3327 | 24 | 752 | WRKY Transcription Factor Family | AT4G12020 | 29.464 | 6.99e-85 | 293 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g3327 | - | - | pcin:129302772 | 1538.09 |