Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3327 ATGGCATACTGTGTTCAAGGAGAATCTTCCTCAGGCTCAAACTCTGGAACTTCTAATTCAACTCTGAAAAGGAAATATGACGTTTTCTTGAGTTTCGCTGGACAAGATACTCGCTTGAATTTTACAGATCACTTGTATGCTGCTTTTGTTAGAAGTGGGATCAGAGCTTTTAGGGATAAGGAAGGAATGGAGAGAGGAGAAGTTATATCACAACAACTCCTTCAAGCAATTGAAGATTCTCCCTGTGCAGTTGTTGTACTCTCTGAAAATTATGCAAATTCTACCTGGTGTTTGGATGAACTCCAAAAGATCCTTGAATGTAGAAATAAATCAGGTCAGCAAGTTTTCCCTATTTTTTATAGTGTAGATCCATCTGACATAAGACACCAAAGAAAAAGTTATGGTGAAGCTCTCGTTAAACATGAAGAGAGATTTAGAGAAAACAAACATAAGGTGCAGAAATGGAGGAACGCTTTATCACTGGTGAGCGACTTGTCTGGCTGGGACACTAGGGGCCGGCCAGAAACAGAGATAGAGTTAGATGATGTTCGATTTGTGGGGATATGGGGTATGGGAGGGATAGGTAAAACAACACTTGCTAGAATTGTTTATGAAAGAATCTCCAGCCAGTTTGAAATGTGTTGCTTTTTGTCCAACATTCGAGAGGTTTCAGAAAGAGAAGATCCAGTTCATGCACAAAGACATCTTCTTTCGCATCTCAACATAAGTAATGAGGTAATCATGAACAAGCATGAAGGAAAAGCCATTCTAAGAAACCTTTTTTGCAGCAAAAAGGTGCTCCTTGTGCTTGATGATGTAACTCACATGAGTCAATTAGAGAATATGGCTGAAAGTCCAAAGTGGTTTGGTATGGGGAGCAGAGTAATTATAACAACAAGAGATATGCACTTGTTGAGATCTCTTGGTGTGCATGGAATATATCAACTTGAAACCATGCAGAAAGATGAATCTCTTCAACTCTTTTCTAGGAAAGCATTTAGAAAAGATTATCCTGAAAGCAATTACTTGATGTTGTCTGAATCTGTGGTTAAATATGCCGGAGGTCTTCCTTTGGCACTCCATGTTCTAGGTTCTTTTTTGTGTGGAAGAAGTGTACCTGAGTGGGAAGATGCTTTAGACAGGCTAAAGGAAATTCCAGAAGATAATATTATTCGAAAACTTAAAATAAGTTATGATGCATTAAATTATCAAGAAAAGGCAATATTTTTGGATATTGCTTGTTTTTTCAATGGATGGATGAAATATGAAGTGACCCAAATTTTGAGAAACTGTGATCTCCACCCTACAATTGGAATAAATGTTTTGATTGAGAAAGCTTTACTAATTGAAAAGAAGAATATGTATGGAAAATGCATTTTAGAGATGCACGATTTACTTCAAGAATTGGGTCGGAATATTGTTTTCCAAGAATCTCTTGATAATGCTGGCAGACGTAGTAGGTTGTGGAATATAGAGGACATCAATGAAATATTGAAAGATAACGCAGGATCAAATGCAATACATGCCATTGTTACGCTTTCCCATGCTGAAGTAGAAGTGCATCCTGAAGTATTTTCAAAGATGAGAAATCTCAGACTTCTCTACTTAGACTGTGGATTGAAACATCCTATAGATTTCAAATGCCTTTCCAATGCATTAAAAGTAATTGTGTGGTTGCATTGTCCACTAGAAGCTCTTCCACTTGAAATTCCACTGCATAAACTTGTTGATATTCAGATGCCTTATAGCAACATAAAGCAACTCTGGAATGGTGTAAAGTTTATGAAGAACTTGAAGCATATTGATATGAGTTATTCTAAAGATTTGACTGAAACTCCAAATTTCTCAGGAGTTCCAAATTTAGAAAATTTAATTCTTGAATGGTGTATATCCCTCATTGTGGTTCATCCCTCGCTTGGAGAGTTGAAAAAACTTGTTGAAGTGGACTTGCATGGATGTATAAGACTTGAAATCCTTCCAAGAAAATTGGAGATGAATTCATTGATAAAGTTGGATCTTGGTTATTGTTATGAAATCTCAATGCTTCCAGAGTTTGGGGAATGCATGAAGAAATTATCTTTGCTTGATGCAAGTTGCACTGCTATAACCAAACTTCCTGAATCACTGGGATTCTTAACTGGTCTGCAAGATTTGGGATTGAGTGGCTGCGAAAATATTGATCTTCATCCCTTTACTGTCAAAAAGTTGTTGGGCTTTAATCTAATGTCATTAACAGAGTTAAACTTAAGCAACTGTGGCATTAGTGATGGATCATTCCTGATGATTTTGGGGGCTTAA 2298 0.3695 MAYCVQGESSSGSNSGTSNSTLKRKYDVFLSFAGQDTRLNFTDHLYAAFVRSGIRAFRDKEGMERGEVISQQLLQAIEDSPCAVVVLSENYANSTWCLDELQKILECRNKSGQQVFPIFYSVDPSDIRHQRKSYGEALVKHEERFRENKHKVQKWRNALSLVSDLSGWDTRGRPETEIELDDVRFVGIWGMGGIGKTTLARIVYERISSQFEMCCFLSNIREVSEREDPVHAQRHLLSHLNISNEVIMNKHEGKAILRNLFCSKKVLLVLDDVTHMSQLENMAESPKWFGMGSRVIITTRDMHLLRSLGVHGIYQLETMQKDESLQLFSRKAFRKDYPESNYLMLSESVVKYAGGLPLALHVLGSFLCGRSVPEWEDALDRLKEIPEDNIIRKLKISYDALNYQEKAIFLDIACFFNGWMKYEVTQILRNCDLHPTIGINVLIEKALLIEKKNMYGKCILEMHDLLQELGRNIVFQESLDNAGRRSRLWNIEDINEILKDNAGSNAIHAIVTLSHAEVEVHPEVFSKMRNLRLLYLDCGLKHPIDFKCLSNALKVIVWLHCPLEALPLEIPLHKLVDIQMPYSNIKQLWNGVKFMKNLKHIDMSYSKDLTETPNFSGVPNLENLILEWCISLIVVHPSLGELKKLVEVDLHGCIRLEILPRKLEMNSLIKLDLGYCYEISMLPEFGECMKKLSLLDASCTAITKLPESLGFLTGLQDLGLSGCENIDLHPFTVKKLLGFNLMSLTELNLSNCGISDGSFLMILGA 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3327 765 PRINTS Disease resistance protein signature 260 274 - -
Prci2g3327 765 PRINTS Disease resistance protein signature 353 367 - -
Prci2g3327 765 PRINTS Disease resistance protein signature 185 200 - -
Prci2g3327 765 PRINTS Disease resistance protein signature 593 609 - -
Prci2g3327 765 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 751 IPR044974 GO:0006952
Prci2g3327 765 ProSiteProfiles TIR domain profile. 24 184 IPR000157 GO:0007165
Prci2g3327 765 FunFam Disease resistance protein (TIR-NBS-LRR class) 320 402 - -
Prci2g3327 765 SMART till_3 25 165 IPR000157 GO:0007165
Prci2g3327 765 Gene3D - 168 310 IPR027417 -
Prci2g3327 765 Pfam TIR domain 25 161 IPR000157 GO:0007165
Prci2g3327 765 Pfam Leucine Rich Repeat 574 593 IPR011713 -
Prci2g3327 765 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 412 IPR027417 -
Prci2g3327 765 Gene3D - 318 402 IPR042197 -
Prci2g3327 765 SUPERFAMILY L domain-like 462 756 - -
Prci2g3327 765 Gene3D - 2 162 IPR035897 -
Prci2g3327 765 Pfam NB-ARC domain 181 388 IPR002182 GO:0043531
Prci2g3327 765 Gene3D Ribonuclease Inhibitor 683 763 IPR032675 -
Prci2g3327 765 Gene3D Ribonuclease Inhibitor 501 682 IPR032675 -
Prci2g3327 765 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 168 IPR035897 -
Prci2g3327 765 FunFam Disease resistance protein (TIR-NBS-LRR class) 22 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3327 Prci-Chr2 42326086 42333798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3327 24 752 WRKY Transcription Factor Family AT4G12020 29.464 6.99e-85 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3327 - - pcin:129302772 1538.09