Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3325 ATGGCGAACACTGCCCTGGGAGAATCTTCCTCAACCTCTGGTGCTCCTAATTCAAGTCTGACTTGGAAATATGACGTTTTTCTGAGTTCTAGTGGAGAAGATACTGTCTTGAAGTTTACAGATCACTTGTATCATGCTCTCACTAGACATGGGATCAGAACTTTTAGAGATGATGAAGGACTTCAGAGAGGAGAAGTTATATCAACACAGCTCATTCAAGCAATCAAGGATTCTCGCTGTGCAGTTGTGGTTCTCTCTCAAAAATATGCAGATTCCAAATGGTGTTTGAATGAACTACAACAAACTCTTGAAAGCAGGAAAGAAATGGGTGGACGAGTTTTTCCCATCTTCTATGATGTAGATCCATCTGATGTAAGAAATCAAAGAAAAAGAGTGGGAGAAGCTCTAGCCAATCATGAAAAGAGACTTAGAGGAGACACGGGCAAAACAGTGCAGATTTGGAGAAACTCTTTATCTGAAATTGGAAATATGATTGGTTGGGACGCTAGAAGTCGGCCTCAAGCCCAACTTATCGAAGAAGTAGTTGGAGAAGTATGGAAATATTTATGTTCCAAGTTACCATTTTATGATAATAATTTGGTTGGAATAGAGCGAAGAATGGTTGATCTAATGTCATGCTTGGAGATTGGGTTGGATGACATTCGCGTTGTAGGGATATGGGGTATGGGCGGCGCTGGCAAAACAACTCTTGCAAGAGTTGTTTATGAAAAAATCTCAGACAGATTTGAAATATGTTCATTTCTTCCCAATGTTAGAGAAACTCTGCAGACAAAAGGCCTAGTCTATTTGCAGAAAAGGCTTCTTTTTCGTCTTAGAATAAATGCGGAAATTCACGATGACCATGAAGGGATGGATATGATAAGAAAGCATTTCTACAATAAAAAGGTTCTTCTTGTCCTTGATGATTTAGATTGCACGACTCAATTCGAGAAGTTAGCTGAAAGTCTAGATTGGTTTGGTAAAGGTAGCAAAATAATTATCACAACGAGAAACAAGCACGTGCTTACTTCATGTGAAGCGAAAATATATGAGATGAAAGTGATGGAGGAAGATGAGTCTCTTCAACTCTTTTCGAAGGAAGCATTCAAGAAAGATGTTCCTGAAGAGGATTATTTGGAGTTGTCCAAATCTGTGGTTGCATATGCAGGAGGTCTTCCTTTGGCACTAAGCGTTTTGGGTTCTTTTCTTTTCGGAAGAAGTAAAGTTGAGTGGATCGACATTTTCAGTTCGAAGCAAATTTTGAATGAAAATATTCATCAAATCCTTAAAATAAGTTATGATGGATTAAATGAGAAAGAAAAAACAATATTTTTGGATATTGCTTGTTTTTTCAGGGGTTGGAGAAAAGATGTAGTGACCCAAGTGTTGAAAGGTTGTGATCTAAACCCTACAATTGAAATACAAGTGTTGATTGAAAGAACTTTACTGGTTGAGAGGGAAAGTCTTTTGGGATATCCCACTTTAGAGATGCACGTTTTATTTGAAGAGTTGGGTAGGGATATTATTCGCCAAGAATCTTTCAATGCTAGCAACCGTAGCAGGTTGTGGGAGTTTGAGAACATTAAGGAAGTATTGGAAAATAATACGGGAACTGAAGCAATACGAGCTACTGCTATGCAAGGATATTATTCTTGGAACTCAAAAGAAAGAAAAGGATCTGAAGCAATACAAGTTATTGTTATGCAACCATTGTATGGGAGGTTGCCTAAAGTAAAAGTACACCCTGAAGCATTTTCAAAGATGAATAATATTAGATTGCTCATAATAGAAGACAGACATCATGCGCTCATCTTACCAAGGGGATTGAAATTTTCTAGTGCATTGAAAGTTGTTTGCTGGCGACAATTTCCTCTTGAAACTCTGCCACTTCCCTTGGATAAACTTGTTCATATTGAAATGCAAGACAGCAAAATAAAGAAACTTTGGAATGGTGAACAGCATATGGAAAAGTTGAAACGTATTGATCTGAGCGATTCTCACAGTTTGATTGAAACTCCAAACTTCTTAGGAGTTCCAAATTTAGAATATTTAAATCTCTCTAGGTGCGTATCCCTTGTTATGGTTCATTCCTCACTTGGAGAGTTGAAAAGACTTGTTGAGATTAACTTGAAGGGTTGTAGAAATCTTGAAATCCTACCAAGAAGATTGGAATCAAATTTTTTGGAAAGGTTAGATCTACATGAGTGTGGAAAAGTTGCGGTGCTCCCAAAGTTTGGGGAAGGTATGAATAAACTATCATATCTTGATGTGAGTAATACTGCTATGACTACACTTCCAGAATCGCTTGGTTCCTTGACTGGTCTTCGATATTTGGATTTGGGAGGGTGCAGAATTCTTGATCTTGACAAGTTGAAGACTCCCATAACTTGTCAAATTTCTAGCTTGGATGTAACTTCATTAACAGAGTTATGTTTAAATTGGTGTGGCTTGAATGATGGATCAATTCTTGATAATATTGGTGGTTTATCATCCCTCATTGCATTGGATCTAGGAGGAAATGATTTTGTTAATCTTCCCACGGGTTGCTTCTCTGGTCTCTTTGGACTTCTCTATCTTTTTTTGGATGATTGCAAAAGGCTCAAGTCATTACCATCGCTTTCAGCACGGTTGATTCGGTTAAGTGCAGCCGGCTGTGATTCAATGGAACCTTTATCAGATAGACAGTCATGGAATTTGGTTGCTTCAAGAGACCATGAGTATCGTGGGCGAATTGAATATGTAAATACTGATGAGAGGCGTGATGACGATGATGTTCATGATGCTATATTGTTGTTCAAGAACGTTAAGTCGGAATATCTGCCACAAAGAGATTTTGTTGCAATTATGCCAGCTGTATGGGAAATACCATCATGGTGTACCAATAAAGAATATTACCCTTTGGATGAGGGAAGAAAGGAATGTGAGATAAAAGTGGACATACCTCAACATTTCCGTGAAAGTGAATGGTTAGGAATTGTTGTATGCCTCCATTTCTCAGGAGGCGCTGGTGGGATGTGGTGGAGTAGCAAAGGTGCAGAAGATGCTGATTACATACGCAAAGACTGGGCGCATGTAATTCCCATGAGGTTCTCAAAATCAACTAATCCTCAACTGTGCTGCATAATGATGGTGTTGGAATTAAATGAGAAAACATGTTGGCAACATCTAACACCTCATAACAACTCCCTTCACATTTTACTTTCTACTTTCGGAAGTCAGATCTGTCCCCCCAGCTCGCAAATATGGGGATGTGGGTGGAGAGTGATATGTAAAGAAGAGATGCAAGTGAATGTCACCCCACCACCACTACTTCCTACACCTCATCATCAGGTCATGCTTTCACAAAGACTCCTTCGTGAAGTAGTTAGAGACATGCATGTAGCAGAGAGAAAACAGATTGCAGTTTGGAGACAATCAAGAGCTCGAAGCCCTGCAATGGCCAACACTGTGCAGGGAGAATCTTCCGCAACCTCTTGTGCTTCTAATTCGACTCCGACTTGGAAATATGATGTTTTCTTGAGTTTTAGAGGAGAAGACACTCGCTTGAACTTTACAGATCACTTGTATCATGCTCTCAAAAGAAGTGGGATCACAGCTTATAGGGATGATGAAGAACTTGAGAGAGGACAAGTTATATCACCACAGCGCATTCAATCAATTAAGGATTCTCTCTGTGCAGTTGTCGTTCTCTCTGAAAATTATGCAAAGTCCACCTGGTGTTTGGATGAACTCCAAAAAATTCTTGAAAGCATGAATGGAATGGGTCGACCAGTTTTCCCCATATTCTATGAGGTAGATCCTTCTGATGTAAGACATCAAATAAAAAGTTTCGTAGAAGCTCTGGCTGAACATGAAAACACATTCAGAAAAAACGTCAACAAAGTGCAGAATTGGAAAAATGCGTTGTCTGAAATTGGCAAATTATCTGGTTGGAAGACCCGAAATCAGCATGAAGCAAATCTTATCGCAGATGTGGTGGGAAAGATATCTCGTTTTACTTTTAAGGTACCATCTTACGATGATAATCTGGTTAACATACAGCCAAGAATGATTGATCTAATGCCATGCTTGGAGATTGGGAGGGATAACGTTTGCCTTGTAGGAATATGGGGGATGAGTGGTGCTGGTAAAACAACTCTAGCAAGAGTGGTTTTTGAAAAAATCTCTGACGAATTTGAAGTGTGTTGCTTTCTTCCTAATGTTGGAGAAACTTTGCGAAGAGAAGGCCTAGTTTCTTTGCAAAAAAAAATTATTTCTCATCTAAGAATAAGAAACATGAAAATTTATGATGATCATGAAGGAATGAGCATGATGATAAGACAGCTTTTCTGTAATAAAAAGGTTCTTCTTGTCCTTGACGATTTAGATCATACGAGTCAATTGAAGAATTTGACTAAAAGTCCAAATTGGTTTGGCAAAGGAAGCAGAATAATTATTACTACAAGAGATATGCATGTGCTCACCTCAACTGGAGGGAAAATATATAGGATGAGAGCCATGGAGAAAGATGAGTCTCTTCAACTCTTTTCTAAGATAGCATTCAAGAAAGATCATCCTGAAAAGGATTATTTGGAGTTGTCTGAATCTGTGGTTGCATATGCAGGAGGTCTTCCTTTGGCACTTAAAGTTTTGGGTTCTTTTCTTTGCAAAAGAAGTGAAGATGAGTGGACCAATACTTTAGATAGATTGAAGCAAATTGAAAAAAGTGGAGTTCTTGATCAAATACTTAAAATGAGTTATGATGGATTGAATGAGAAAGAAAAGACAATATTTTTAGATATTGCTTGTTTCTTCAGGGGTTGGATGAAACATAAAGTAAACCAAGTTTTGGAAGGCTGTGATCTAAATCCAACAAATGAAAAAATTCTACTTGTTGAAACAAAACATCTTTGGGATGATCCCACTTTAGAGATGCATGATTTACTTGAAGATTTGGGCAGAAATATTATTCATCGAGAATCTCCCAATGTCGGGAAGCGTAGCAGGTTGTGGGAGTTTGAGGACATTAAGGAAGTATTGGAAAATAACACAGGATCTGAAGCAATCCAAGCAATTGTTATGCAAGATTATTGGAACTCAGATGCAAGAATAAAAGTGCATCCTGAAGCCTTTTCAAAGTTGAATAATATTAGATTATTGATCTTATCTGAGAATATTGATGTTCAACTCAGATTACCAAGGGAATTGGAACTTTCTAGCCTCCAATGTCCTTTTAGTGCATTGAAAGTTGTTCGATGGCCATCATTTCCTTTCGAAACTCTCCCACTTCCATTGCATAAACTTGTTGATCTTCAAATGCCTTCTAGCAAAATAAAGAAACTTTGGAATGGCATAGAGTTCATGAAAAAGTTGAAACGCATTGATCTAAGCTATTCTAACAAATTGATCGAAACTCCAGACTTCTCAGGGGTTCCATATTTAGAACAATTAATTCTTTTGGGATGCGAAGCCCTTGTCGAGGTTCATCCTTCTCTAGGAGAGTTGATAATGCTTGTCAAGGTGGACTTGTCTTCCTGTGAAAATCTTGAAATCCTACCAAGTAAATTGGAAACAAATTCTCTAGAAAGGTTAGATCTAAGTTGCTGTGGAAAAGTTGCGATGCTACCAGAGATTGGGGAAGGCATGGAAAAATTATCATATCTTGATGTGAGTGATACTGCTATAACTACACTTCCAAAATCACTTGGTTCCTTAACTGGTCTTGGATATTTGGATTTGAGTGACTGCAAAATTCCTGATCTTGGCAAGTTATTGAAGATTTCTGTGACACGCCAAATTTATGGCTTGAATCTAACATCATTAACGGAGTTATATTTAAGGCGGTGTGGCTTAAATGATGGATCAATTCCTGATAATCTTGACAGTTTATCATCACTCATTGTATTGGATCTAAGAGGAAATGATTTTGTTAATCTACCCACGGGCTGCTTCTCTAGTCTCTTTCGACTTCTCTATCTTTTTTTGGATGGTTGCAAAAGGCTCAAGTCATTGCCATGGCTTCCAGCACGGGTGATTCGGTTAAGTGCAGACAGTTGTGATTCAATGGAACCTTTATCAGATGAACAACTATGGAATTTGGTTGTTTCACGTGACCATGAGTATCGTGGGCGAACTGAATATGTAAAAAGTTATGAGATGTCTAGTGATATACATCCCCCATTTTTCATGTTGGAGCACGTTAAGGTGAGGGTGGTGGGATTTGGTGGAGTAGTAAAGGTGCAGAAGATGATGATTATATATGCAAAGAGTGGGGGCATGTTATTGACCCTAGTGAGCGTGATGATGATGAGACTCGTCCTAAACGGTGCATAA 6312 0.3847 MANTALGESSSTSGAPNSSLTWKYDVFLSSSGEDTVLKFTDHLYHALTRHGIRTFRDDEGLQRGEVISTQLIQAIKDSRCAVVVLSQKYADSKWCLNELQQTLESRKEMGGRVFPIFYDVDPSDVRNQRKRVGEALANHEKRLRGDTGKTVQIWRNSLSEIGNMIGWDARSRPQAQLIEEVVGEVWKYLCSKLPFYDNNLVGIERRMVDLMSCLEIGLDDIRVVGIWGMGGAGKTTLARVVYEKISDRFEICSFLPNVRETLQTKGLVYLQKRLLFRLRINAEIHDDHEGMDMIRKHFYNKKVLLVLDDLDCTTQFEKLAESLDWFGKGSKIIITTRNKHVLTSCEAKIYEMKVMEEDESLQLFSKEAFKKDVPEEDYLELSKSVVAYAGGLPLALSVLGSFLFGRSKVEWIDIFSSKQILNENIHQILKISYDGLNEKEKTIFLDIACFFRGWRKDVVTQVLKGCDLNPTIEIQVLIERTLLVERESLLGYPTLEMHVLFEELGRDIIRQESFNASNRSRLWEFENIKEVLENNTGTEAIRATAMQGYYSWNSKERKGSEAIQVIVMQPLYGRLPKVKVHPEAFSKMNNIRLLIIEDRHHALILPRGLKFSSALKVVCWRQFPLETLPLPLDKLVHIEMQDSKIKKLWNGEQHMEKLKRIDLSDSHSLIETPNFLGVPNLEYLNLSRCVSLVMVHSSLGELKRLVEINLKGCRNLEILPRRLESNFLERLDLHECGKVAVLPKFGEGMNKLSYLDVSNTAMTTLPESLGSLTGLRYLDLGGCRILDLDKLKTPITCQISSLDVTSLTELCLNWCGLNDGSILDNIGGLSSLIALDLGGNDFVNLPTGCFSGLFGLLYLFLDDCKRLKSLPSLSARLIRLSAAGCDSMEPLSDRQSWNLVASRDHEYRGRIEYVNTDERRDDDDVHDAILLFKNVKSEYLPQRDFVAIMPAVWEIPSWCTNKEYYPLDEGRKECEIKVDIPQHFRESEWLGIVVCLHFSGGAGGMWWSSKGAEDADYIRKDWAHVIPMRFSKSTNPQLCCIMMVLELNEKTCWQHLTPHNNSLHILLSTFGSQICPPSSQIWGCGWRVICKEEMQVNVTPPPLLPTPHHQVMLSQRLLREVVRDMHVAERKQIAVWRQSRARSPAMANTVQGESSATSCASNSTPTWKYDVFLSFRGEDTRLNFTDHLYHALKRSGITAYRDDEELERGQVISPQRIQSIKDSLCAVVVLSENYAKSTWCLDELQKILESMNGMGRPVFPIFYEVDPSDVRHQIKSFVEALAEHENTFRKNVNKVQNWKNALSEIGKLSGWKTRNQHEANLIADVVGKISRFTFKVPSYDDNLVNIQPRMIDLMPCLEIGRDNVCLVGIWGMSGAGKTTLARVVFEKISDEFEVCCFLPNVGETLRREGLVSLQKKIISHLRIRNMKIYDDHEGMSMMIRQLFCNKKVLLVLDDLDHTSQLKNLTKSPNWFGKGSRIIITTRDMHVLTSTGGKIYRMRAMEKDESLQLFSKIAFKKDHPEKDYLELSESVVAYAGGLPLALKVLGSFLCKRSEDEWTNTLDRLKQIEKSGVLDQILKMSYDGLNEKEKTIFLDIACFFRGWMKHKVNQVLEGCDLNPTNEKILLVETKHLWDDPTLEMHDLLEDLGRNIIHRESPNVGKRSRLWEFEDIKEVLENNTGSEAIQAIVMQDYWNSDARIKVHPEAFSKLNNIRLLILSENIDVQLRLPRELELSSLQCPFSALKVVRWPSFPFETLPLPLHKLVDLQMPSSKIKKLWNGIEFMKKLKRIDLSYSNKLIETPDFSGVPYLEQLILLGCEALVEVHPSLGELIMLVKVDLSSCENLEILPSKLETNSLERLDLSCCGKVAMLPEIGEGMEKLSYLDVSDTAITTLPKSLGSLTGLGYLDLSDCKIPDLGKLLKISVTRQIYGLNLTSLTELYLRRCGLNDGSIPDNLDSLSSLIVLDLRGNDFVNLPTGCFSSLFRLLYLFLDGCKRLKSLPWLPARVIRLSADSCDSMEPLSDEQLWNLVVSRDHEYRGRTEYVKSYEMSSDIHPPFFMLEHVKVRVVGFGGVVKVQKMMIIYAKSGGMLLTLVSVMMMRLVLNGA 2103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3325 2103 FunFam Disease resistance protein (TIR-NBS-LRR class) 1501 1584 - -
Prci2g3325 2103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1335 1594 IPR027417 -
Prci2g3325 2103 ProSiteProfiles TIR domain profile. 22 193 IPR000157 GO:0007165
Prci2g3325 2103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 447 IPR027417 -
Prci2g3325 2103 SUPERFAMILY Toll/Interleukin receptor TIR domain 1160 1311 IPR035897 -
Prci2g3325 2103 ProSiteProfiles TIR domain profile. 1167 1333 IPR000157 GO:0007165
Prci2g3325 2103 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 191 - -
Prci2g3325 2103 Gene3D Ribonuclease Inhibitor 1691 1875 IPR032675 -
Prci2g3325 2103 Gene3D Ribonuclease Inhibitor 574 746 IPR032675 -
Prci2g3325 2103 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 167 IPR035897 -
Prci2g3325 2103 Pfam Leucine Rich Repeat 1760 1778 IPR011713 -
Prci2g3325 2103 SUPERFAMILY L domain-like 1638 1999 - -
Prci2g3325 2103 Gene3D Ribonuclease Inhibitor 747 900 IPR032675 -
Prci2g3325 2103 Gene3D - 1499 1584 IPR042197 -
Prci2g3325 2103 Gene3D - 356 437 IPR042197 -
Prci2g3325 2103 PRINTS Disease resistance protein signature 389 403 - -
Prci2g3325 2103 PRINTS Disease resistance protein signature 223 238 - -
Prci2g3325 2103 PRINTS Disease resistance protein signature 297 311 - -
Prci2g3325 2103 PRINTS Disease resistance protein signature 653 669 - -
Prci2g3325 2103 Pfam TIR domain 1168 1330 IPR000157 GO:0007165
Prci2g3325 2103 Pfam TIR domain 23 189 IPR000157 GO:0007165
Prci2g3325 2103 Gene3D - 1333 1498 IPR027417 -
Prci2g3325 2103 Gene3D - 191 355 IPR027417 -
Prci2g3325 2103 FunFam Disease resistance protein (TIR-NBS-LRR class) 1165 1335 - -
Prci2g3325 2103 Pfam NB-ARC domain 220 416 IPR002182 GO:0043531
Prci2g3325 2103 Pfam NB-ARC domain 1365 1580 IPR002182 GO:0043531
Prci2g3325 2103 SUPERFAMILY L domain-like 580 879 - -
Prci2g3325 2103 Gene3D Ribonuclease Inhibitor 1876 2025 IPR032675 -
Prci2g3325 2103 SMART LRR_typ_2 829 852 IPR003591 -
Prci2g3325 2103 SMART LRR_typ_2 1956 1979 IPR003591 -
Prci2g3325 2103 SMART LRR_typ_2 749 772 IPR003591 -
Prci2g3325 2103 SMART LRR_typ_2 1875 1898 IPR003591 -
Prci2g3325 2103 SMART LRR_typ_2 1931 1955 IPR003591 -
Prci2g3325 2103 SUPERFAMILY "Winged helix" DNA-binding domain 424 533 IPR036390 -
Prci2g3325 2103 Gene3D - 18 190 IPR035897 -
Prci2g3325 2103 Gene3D - 1165 1332 IPR035897 -
Prci2g3325 2103 Pfam Leucine rich repeat 1853 1911 IPR001611 GO:0005515
Prci2g3325 2103 Pfam Leucine rich repeat 728 785 IPR001611 GO:0005515
Prci2g3325 2103 SMART till_3 23 164 IPR000157 GO:0007165
Prci2g3325 2103 SMART till_3 1168 1308 IPR000157 GO:0007165
Prci2g3325 2103 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 871 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3325 Prci-Chr2 42231446 42244684 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3325 16 866 WRKY Transcription Factor Family AT4G12020 29.452 1.72e-80 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3325 - - pcin:129303275 4082.33