Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3323 ATGGCGAACACTGCCCTGGGAGAATCTTCCTCAACCTCTGGTGCTCCTAATTCAAGTCTGACTTGGAAATATGACGTTTTTCTGAGTTCTAGTGGAGAAGATACTGTCTTGAAGTTTACAGATCACTTGTATCATGCTCTCACTAGACATGGGATCAGAACTTTTAGAGATGATGAAGGACTTCAGAGAGGAGAAGTTATATCAACACAGCTCATTCAAGCAATCAAGGATTCTCGCTGTGCAGTTGTGGTTCTCTCTCAAAAATATGCAGATTCCAAATGGTGTTTGAATGAACTACAACAAACTCTTGAAAGCAGGAAAGAAATGGGTGGACGAGTTTTTCCCATCTTCTATGATGTAGATCCATCTGATGTAAGAAATCAAAGAAAAAGAGTGGGAGAAGCTCTAGCCAATCATGAAAAGAGACTTAGAGGAGACACGGGCAAAACAGTGCAGATTTGGAGAAACTCTTTATCTGAAATTGGAAATATGATTGGTTGGGACGCTAGAAGTCGGCCTCAAGCCCAACTTATCGAAGAAGTAGTTGGAGAAGTATGGAAATATTTATGTTCCAAGTTACCATTTTATGATAATAATTTGGTTGGAATAGAGCGAAGAATGGTTGATCTAATGTCATGCTTGGAGATTGGGTTGGATGACATTCGCGTTGTAGGGATATGGGGTATGGGCGGCGCTGGCAAAACAACTCTTGCAAGAGTTGTTTATGAAAAAATCTCAGACAGATTTGAAATATGTTCATTTCTTCCCAATGTTAGAGAAACTCTGCAGACAAAAGGCCTAGTCTATTTGCAGAAAAGGCTTCTTTTTCGTCTTAGAATAAATGCGGAAATTCACGATGACCATGAAGGGATGGATATGATAAGAAAGCATTTCTACAATAAAAAGGTTCTTCTTGTCCTTGATGATTTAGATTGCACGACTCAATTCGAGAAGTTAGCTGAAAGTCTAGATTGGTTTGGTAAAGGTAGCAAAATAATTATCACAACGAGAAACAAGCACGTGCTTACTTCATGTGAAGCGAAAATATATGAGATGAAAGTGATGGAGGAAGATGAGTCTCTTCAACTCTTTTCGAAGGAAGCATTCAAGAAAGATGTTCCTGAAGAGGATTATTTGGAGTTGTCCAAATCTGTGGTTGCATATGCAGGAGGTCTTCCTTTGGCACTAAGCGTTTTGGGTTCTTTTCTTTTCGGAAGAAGTAAAGTTGAGTGGATCGACATTTTCAGTTCGAAGCAAATTTTGAATGAAAATATTCATCAAATCCTTAAAATAAGTTATGATGGATTAAATGAGAAAGAAAAAACAATATTTTTGGATATTGCTTGTTTTTTCAGGGGTTGGAGAAAAGATGTAGTGACCCAAGTGTTGAAAGGTTGTGATCTAAACCCTACAATTGAAATACAAGTGTTGATTGAAAGAACTTTACTGGTTGAGAGGGAAAGTCTTTTGGGATATCCCACTTTAGAGATGCACGTTTTATTTGAAGAGTTGGGTAGGGATATTATTCGCCAAGAATCTTTCAATGCTAGCAACCGTAGCAGGTTGTGGGAGTTTGAGAACATTAAGGAAGTATTGGAAAATAATACGGGAACTGAAGCAATACGAGCTACTGCTATGCAAGGATATTATTCTTGGAACTCAAAAGAAAGAAAAGGATCTGAAGCAATACAAGTTATTGTTATGCAACCATTGTATGGGAGGTTGCCTAAAGTAAAAGTACACCCTGAAGCATTTTCAAAGATGAATAATATTAGATTGCTCATAATAGAAGACAGACATCATGCGCTCATCTTACCAAGGGGATTGAAATTTTCTAGTGCATTGAAAGTTGTTTGCTGGCGACAATTTCCTCTTGAAACTCTGCCACTTCCCTTGGATAAACTTGTTCATATTGAAATGCAAGACAGCAAAATAAAGAAACTTTGGAATGGTGAACAGCATATGGAAAAGTTGAAACGTATTGATCTGAGCGATTCTCACAGTTTGATTGAAACTCCAAACTTCTTAGGAGTTCCAAATTTAGAATATTTAAATCTCTCTAGGTGCGTATCCCTTGTTATGGTTCATTCCTCACTTGGAGAGTTGAAAAGACTTGTTGAGATTAACTTGAAGGGTTGTAGAAATCTTGAAATCCTACCAAGAAGATTGGAATCAAATTTTTTGGAAAGGTTAGATCTACATGAGTGTGGAAAAGTTGCGGTGCTCCCAAAGTTTGGGGAAGGTATGAATAAACTATCATATCTTGATGTGAGTAATACTGCTATGACTACACTTCCAGAATCGCTTGGTTCCTTGACTGGTCTTCGATATTTGGATTTGGGAGGGTGCAGAATTCTTGATCTTGACAAGTTGAAGACTCCCATAACTTGTCAAATTTCTAGCTTGGATGTAACTTCATTAACAGAGTTATGTTTAAATTGGTGTGGCTTGAATGATGGATCAATTCTTGATAATATTGGTGGTTTATCATCCCTCATTGCATTGGATCTAGGAGGAAATGATTTTGTTAATCTTCCCACGGGTTGCTTCTCTGGTCTCTTTGGACTTCTCTATCTTTTTTTGGATGATTGCAAAAGGCTCAAGTCATTACCATCGCTTTCAGCACGGTTGATTCGGTTAAGTGCAGCCGGCTGTGATTCAATGGAACCTTTATCAGATAGACAGTCATGGAATTTGGTTGCTTCAAGAGACCATGAGTATCGTGGGCGAATTGAATATGTAAATACTGATGAGAGGCGTGATGACGATGATGTTCATGATGCTATATTGTTGTTCAAGAACGTTAAGTCGGAATATCTGCCACAAAGAGATTTTGTTGCAATTATGCCAGCTGTATGGGAAATACCATCATGGTGTACCAATAAAGAATATTACCCTTTGGATGAGGGAAGAAAGGAATGTGAGATAAAAGTGGACATACCTCAACATTTCCGTGAAAGTGAATGGTTAGGAATTGTTGTATGCCTCCATTTCTCAGGAGGCGCTGGTGGGATGTGGTGGAGTAGCAAAGGTGCAGAAGATGCTGATTACATACGCAAAGACTGGGCGCATGTAATTCCCATGAGGTTCTCAAAATCAACTAATCCTCAACTGTGCTGCATAATGATGGTGTTGGAATTAAATGAGAAAACATGTTGGCAACATCTAACACCTCATAACAACTCCCTTCACATTTTACTTTCTACTTTCGGAAGTCAGATCTGTCCCCCCAGCTCGCAAATATGGGGATGTGGGTGGAGAGTGATATGTAAAGAAGAGATGCAAGTGAATGTCACCCCACCACCACTACTTCCTACACCTCATCATCAGGTCATGCTTTCACAAAGACTCCTTCGTGAAGTAGTTAGAGACATGCATGTAGCAGAGAGAAAACAGATTGCAGTTTGGAGACAATCAAGAGCTCGAAGCCCTGCAATGGCCAACACTGTGCAGGGAGAATCTTCCGCAACCTCTTGTGCTTCTAATTCGACTCCGACTTGGAAATATGATGTTTTCTTGAGTTTTAGAGGAGAAGACACTCGCTTGAACTTTACAGATCACTTGTATCATGCTCTCAAAAGAAGTGGGATCACAGCTTATAGGGATGATGAAGAACTTGAGAGAGGACAAGTTATATCACCACAGCGCATTCAATCAATTAAGGATTCTCTCTGTGCAGTTGTCGTTCTCTCTGAAAATTATGCAAAGTCCACCTGGTGTTTGGATGAACTCCAAAAAATTCTTGAAAGCATGAATGGAATGGGTCGACCAGTTTTCCCCATATTCTATGAGGTAGATCCTTCTGATGTAAGACATCAAATAAAAAGTTTCGTAGAAGCTCTGGCTGAACATGAAAACACATTCAGAAAAAACGTCAACAAAGTGCAGAATTGGAAAAATGCGTTGTCTGAAATTGGCAAATTATCTGGTTGGAAGACCCGAAATCAGCATGAAGCAAATCTTATCGCAGATGTGGTGGGAAAGATATCTCGTTTTACTTTTAAGGTACCATCTTACGATGATAATCTGGTTAACATACAGCCAAGAATGATTGATCTAATGCCATGCTTGGAGATTGGGAGGGATAACGTTTGCCTTGTAGGAATATGGGGGATGAGTGGTGCTGGTAAAACAACTCTAGCAAGAGTGGTTTTTGAAAAAATCTCTGACGAATTTGAAGTGTGTTGCTTTCTTCCTAATGTTGGAGAAACTTTGCGAAGAGAAGGCCTAGTTTCTTTGCAAAAAAAAATTATTTCTCATCTAAGAATAAGAAACATGAAAATTTATGATGATCATGAAGGAATGAGCATGATGATAAGACAGCTTTTCTGTAATAAAAAGGTTCTTCTTGTCCTTGACGATTTAGATCATACGAGTCAATTGAAGAATTTGACTAAAAGTCCAAATTGGTTTGGCAAAGGAAGCAGAATAATTATTACTACAAGAGATATGCATGTGCTCACCTCAACTGGAGGGAAAATATATAGGATGAGAGCCATGGAGAAAGATGAGTCTCTTCAACTCTTTTCTAAGATAGCATTCAAGAAAGATCATCCTGAAAAGGATTATTTGGAGTTGTCTGAATCTGTGGTTGCATATGCAGGAGGTCTTCCTTTGGCACTTAAAGTTTTGGGTTCTTTTCTTTGCAAAAGAAGTGAAGATGAGTGGACCAATACTTTAGATAGATTGAAGCAAATTGAAAAAAGTGGAGTTCTTGATCAAATACTTAAAATGAGTTATGATGGATTGAATGAGAAAGAAAAGACAATATTTTTAGATATTGCTTGTTTCTTCAGGGGTTGGATGAAACATAAAGTAAACCAAGTTTTGGAAGGCTGTGATCTAAATCCAACAAATGAAAAAATTCTACTTGTTGAAACAAAACATCTTTGGGATGATCCCACTTTAGAGATGCATGATTTACTTGAAGATTTGGGCAGAAATATTATTCATCGAGAATCTCCCAATGTCGGGAAGCGTAGCAGGTTGTGGGAGTTTGAGGACATTAAGGAAGTATTGGAAAATAACACAGGATCTGAAGCAATCCAAGCAATTGTTATGCAAGATTATTGGAACTCAGATGCAAGAATAAAAGTGCATCCTGAAGCCTTTTCAAAGTTGAATAATATTAGATTATTGATCTTATCTGAGAATATTGATGTTCAACTCAGATTACCAAGGGAATTGGAACTTTCTAGCCTCCAATGTCCTTTTAGTGCATTGAAAGTTGTTCGATGGCCATCATTTCCTTTCGAAACTCTCCCACTTCCATTGCATAAACTTGTTGATCTTCAAATGCCTTCTAGCAAAATAAAGAAACTTTGGAATGGCATAGAGTTCATGAAAAAGTTGAAACGCATTGATCTAAGCTATTCTAACAAATTGATCGAAACTCCAGACTTCTCAGGGGTTCCATATTTAGAACAATTAATTCTTTTGGGATGCGAAGCCCTTGTCGAGGTTCATCCTTCTCTAGGAGAGTTGATAATGCTTGTCAAGGTGGACTTGTCTTCCTGTGAAAATCTTGAAATCCTACCAAGTAAATTGGAAACAAATTCTCTAGAAAGGTTAGATCTAAGTTGCTGTGGAAAAGTTGCGATGCTACCAGAGATTGGGGAAGGCATGGAAAAATTATCATATCTTGATGTGAGTGATACTGCTATAACTACACTTCCAAAATCACTTGGTTCCTTAACTGGTCTTGGATATTTGGATTTGAGTGACTGCAAAATTCCTGATCTTGGCAAGTTATTGAAGATTTCTGTGACACGCCAAATTTATGGCTTGAATCTAACATCATTAACGGAGTTATATTTAAGGCGGTGTGGCTTAAATGATGGATCAATTCCTGATAATCTTGACAGTTTATCATCACTCATTGTATTGGATCTAAGAGGAAATGATTTTGTTAATCTACCCACGGGCTGCTTCTCTAGTCTCTTTCGACTTCTCTATCTTTTTTTGGATGGTTGCAAAAGGCTCAAGTCATTGCCATGGCTTCCAGCACGGGTGATTCGGTTAAGTGCAGACAGTTGTGATTCAATGGAACCTTTATCAGATGAACAACTATGGAATTTGGTTGTTTCACGTGACCATGAGTATCGTGGGCGAACTGAATATGTAAAAAGTTATGAGATGTCTAGTGATATACATCCCCCATTTTTCATGTTGGAGCACGTTAAGCCGGAATTTCTTCCCCAAAGAGATTTTCTGGCAATCATACCAGGATGTGAAATACCATCTTGGTATACAAATAAAGAATATTATCCTTTGGAAGAGAACGTTAAGGAATGTGAGATAAAAGTGGAGATACCTCAGCATTTCCGTGAAAGTGAGTGGTTACGAATGGTTGTATGCCTCCATGTCTCAGGTGAGGGTGGTGGGATTTGGTGGAGTAGTAAAGGTGCAGAAGATGATGATTATATATGCAAAGAGTGGGGGCATGTTATTGACCCTAGTGAGCGTGATGATGATGAGACTCGTCCTAAACGGTGCATAATAATGGTGTTGGAATTAAATGAGAAAACATGTTGGCAACATCTCACATCTCATAACAACTCCCTTCACATTTTACTTTCTACTTCCGAAAGCATTGGTGGTCAATTTGACATGAAAATAATGGGATGTGGCTGGTGGAGAGTGATACGTAAAGAAGAGATGCCAGAGTGTTGCATTCTCAATCATTTCACCCAACCACCACTACTTGCTCCTCCTCGTCATCAGGTCATGCTTTCAGAAACTCTCCTTGACCAAGTTGCTAGAAAAGTGTGGGGGAAAGGGAGAAGACAGATAAGAGGTGCGTGA 6804 0.3868 MANTALGESSSTSGAPNSSLTWKYDVFLSSSGEDTVLKFTDHLYHALTRHGIRTFRDDEGLQRGEVISTQLIQAIKDSRCAVVVLSQKYADSKWCLNELQQTLESRKEMGGRVFPIFYDVDPSDVRNQRKRVGEALANHEKRLRGDTGKTVQIWRNSLSEIGNMIGWDARSRPQAQLIEEVVGEVWKYLCSKLPFYDNNLVGIERRMVDLMSCLEIGLDDIRVVGIWGMGGAGKTTLARVVYEKISDRFEICSFLPNVRETLQTKGLVYLQKRLLFRLRINAEIHDDHEGMDMIRKHFYNKKVLLVLDDLDCTTQFEKLAESLDWFGKGSKIIITTRNKHVLTSCEAKIYEMKVMEEDESLQLFSKEAFKKDVPEEDYLELSKSVVAYAGGLPLALSVLGSFLFGRSKVEWIDIFSSKQILNENIHQILKISYDGLNEKEKTIFLDIACFFRGWRKDVVTQVLKGCDLNPTIEIQVLIERTLLVERESLLGYPTLEMHVLFEELGRDIIRQESFNASNRSRLWEFENIKEVLENNTGTEAIRATAMQGYYSWNSKERKGSEAIQVIVMQPLYGRLPKVKVHPEAFSKMNNIRLLIIEDRHHALILPRGLKFSSALKVVCWRQFPLETLPLPLDKLVHIEMQDSKIKKLWNGEQHMEKLKRIDLSDSHSLIETPNFLGVPNLEYLNLSRCVSLVMVHSSLGELKRLVEINLKGCRNLEILPRRLESNFLERLDLHECGKVAVLPKFGEGMNKLSYLDVSNTAMTTLPESLGSLTGLRYLDLGGCRILDLDKLKTPITCQISSLDVTSLTELCLNWCGLNDGSILDNIGGLSSLIALDLGGNDFVNLPTGCFSGLFGLLYLFLDDCKRLKSLPSLSARLIRLSAAGCDSMEPLSDRQSWNLVASRDHEYRGRIEYVNTDERRDDDDVHDAILLFKNVKSEYLPQRDFVAIMPAVWEIPSWCTNKEYYPLDEGRKECEIKVDIPQHFRESEWLGIVVCLHFSGGAGGMWWSSKGAEDADYIRKDWAHVIPMRFSKSTNPQLCCIMMVLELNEKTCWQHLTPHNNSLHILLSTFGSQICPPSSQIWGCGWRVICKEEMQVNVTPPPLLPTPHHQVMLSQRLLREVVRDMHVAERKQIAVWRQSRARSPAMANTVQGESSATSCASNSTPTWKYDVFLSFRGEDTRLNFTDHLYHALKRSGITAYRDDEELERGQVISPQRIQSIKDSLCAVVVLSENYAKSTWCLDELQKILESMNGMGRPVFPIFYEVDPSDVRHQIKSFVEALAEHENTFRKNVNKVQNWKNALSEIGKLSGWKTRNQHEANLIADVVGKISRFTFKVPSYDDNLVNIQPRMIDLMPCLEIGRDNVCLVGIWGMSGAGKTTLARVVFEKISDEFEVCCFLPNVGETLRREGLVSLQKKIISHLRIRNMKIYDDHEGMSMMIRQLFCNKKVLLVLDDLDHTSQLKNLTKSPNWFGKGSRIIITTRDMHVLTSTGGKIYRMRAMEKDESLQLFSKIAFKKDHPEKDYLELSESVVAYAGGLPLALKVLGSFLCKRSEDEWTNTLDRLKQIEKSGVLDQILKMSYDGLNEKEKTIFLDIACFFRGWMKHKVNQVLEGCDLNPTNEKILLVETKHLWDDPTLEMHDLLEDLGRNIIHRESPNVGKRSRLWEFEDIKEVLENNTGSEAIQAIVMQDYWNSDARIKVHPEAFSKLNNIRLLILSENIDVQLRLPRELELSSLQCPFSALKVVRWPSFPFETLPLPLHKLVDLQMPSSKIKKLWNGIEFMKKLKRIDLSYSNKLIETPDFSGVPYLEQLILLGCEALVEVHPSLGELIMLVKVDLSSCENLEILPSKLETNSLERLDLSCCGKVAMLPEIGEGMEKLSYLDVSDTAITTLPKSLGSLTGLGYLDLSDCKIPDLGKLLKISVTRQIYGLNLTSLTELYLRRCGLNDGSIPDNLDSLSSLIVLDLRGNDFVNLPTGCFSSLFRLLYLFLDGCKRLKSLPWLPARVIRLSADSCDSMEPLSDEQLWNLVVSRDHEYRGRTEYVKSYEMSSDIHPPFFMLEHVKPEFLPQRDFLAIIPGCEIPSWYTNKEYYPLEENVKECEIKVEIPQHFRESEWLRMVVCLHVSGEGGGIWWSSKGAEDDDYICKEWGHVIDPSERDDDETRPKRCIIMVLELNEKTCWQHLTSHNNSLHILLSTSESIGGQFDMKIMGCGWWRVIRKEEMPECCILNHFTQPPLLAPPRHQVMLSETLLDQVARKVWGKGRRQIRGA 2267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3323 2267 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 167 IPR035897 -
Prci2g3323 2267 ProSiteProfiles TIR domain profile. 22 193 IPR000157 GO:0007165
Prci2g3323 2267 FunFam Disease resistance protein (TIR-NBS-LRR class) 1165 1335 - -
Prci2g3323 2267 Pfam TIR domain 23 189 IPR000157 GO:0007165
Prci2g3323 2267 Pfam TIR domain 1168 1330 IPR000157 GO:0007165
Prci2g3323 2267 ProSiteProfiles TIR domain profile. 1167 1333 IPR000157 GO:0007165
Prci2g3323 2267 SUPERFAMILY Toll/Interleukin receptor TIR domain 1160 1311 IPR035897 -
Prci2g3323 2267 Pfam NB-ARC domain 220 416 IPR002182 GO:0043531
Prci2g3323 2267 Pfam NB-ARC domain 1365 1580 IPR002182 GO:0043531
Prci2g3323 2267 PRINTS Disease resistance protein signature 223 238 - -
Prci2g3323 2267 PRINTS Disease resistance protein signature 653 669 - -
Prci2g3323 2267 PRINTS Disease resistance protein signature 297 311 - -
Prci2g3323 2267 PRINTS Disease resistance protein signature 389 403 - -
Prci2g3323 2267 Gene3D - 1499 1584 IPR042197 -
Prci2g3323 2267 Gene3D - 356 437 IPR042197 -
Prci2g3323 2267 Gene3D - 1333 1498 IPR027417 -
Prci2g3323 2267 Gene3D - 191 355 IPR027417 -
Prci2g3323 2267 Pfam Leucine rich repeat 728 785 IPR001611 GO:0005515
Prci2g3323 2267 Pfam Leucine rich repeat 1853 1911 IPR001611 GO:0005515
Prci2g3323 2267 Gene3D Ribonuclease Inhibitor 1691 1871 IPR032675 -
Prci2g3323 2267 Gene3D Ribonuclease Inhibitor 574 747 IPR032675 -
Prci2g3323 2267 FunFam Disease resistance protein (TIR-NBS-LRR class) 1501 1584 - -
Prci2g3323 2267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1335 1594 IPR027417 -
Prci2g3323 2267 Gene3D - 18 190 IPR035897 -
Prci2g3323 2267 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 191 - -
Prci2g3323 2267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 447 IPR027417 -
Prci2g3323 2267 SUPERFAMILY L domain-like 580 879 - -
Prci2g3323 2267 Gene3D - 1165 1332 IPR035897 -
Prci2g3323 2267 SMART LRR_typ_2 829 852 IPR003591 -
Prci2g3323 2267 SMART LRR_typ_2 1956 1979 IPR003591 -
Prci2g3323 2267 SMART LRR_typ_2 749 772 IPR003591 -
Prci2g3323 2267 SMART LRR_typ_2 1875 1898 IPR003591 -
Prci2g3323 2267 SMART LRR_typ_2 1931 1955 IPR003591 -
Prci2g3323 2267 Pfam Leucine Rich Repeat 1760 1778 IPR011713 -
Prci2g3323 2267 Gene3D Ribonuclease Inhibitor 748 898 IPR032675 -
Prci2g3323 2267 Gene3D Ribonuclease Inhibitor 1872 2026 IPR032675 -
Prci2g3323 2267 SUPERFAMILY "Winged helix" DNA-binding domain 424 533 IPR036390 -
Prci2g3323 2267 SMART till_3 23 164 IPR000157 GO:0007165
Prci2g3323 2267 SMART till_3 1168 1308 IPR000157 GO:0007165
Prci2g3323 2267 SUPERFAMILY L domain-like 1638 1999 - -
Prci2g3323 2267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 871 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3323 Prci-Chr2 42230368 42244624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3323 16 866 WRKY Transcription Factor Family AT4G12020 29.452 1.15e-80 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3323 - - pcin:129303275 4529.55