Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3321 ATGGCGAACACTGCCCTGGGAGAATCTTCCTCAACCTCTGGTGCTCCTAATTCAAGTCTGACTTGGAAATATGACGTTTTTCTGAGTTCTAGTGGAGAAGATACTGTCTTGAAGTTTACAGATCACTTGTATCATGCTCTCACTAGACATGGGATCAGAACTTTTAGAGATGATGAAGGACTTCAGAGAGGAGAAGTTATATCAACACAGCTCATTCAAGCAATCAAGGATTCTCGCTGTGCAGTTGTGGTTCTCTCTCAAAAATATGCAGATTCCAAATGGTGTTTGAATGAACTACAACAAACTCTTGAAAGCAGGAAAGAAATGGGTGGACGAGTTTTTCCCATCTTCTATGATGTAGATCCATCTGATGTAAGAAATCAAAGAAAAAGAGTGGGAGAAGCTCTAGCCAATCATGAAAAGAGACTTAGAGGAGACACGGGCAAAACAGTGCAGATTTGGAGAAACTCTTTATCTGAAATTGGAAATATGATTGGTTGGGACGCTAGAAGTCGGCCTCAAGCCCAACTTATCGAAGAAGTAGTTGGAGAAGTATGGAAATATTTATGTTCCAAGTTACCATTTTATGATAATAATTTGGTTGGAATAGAGCGAAGAATGGTTGATCTAATGTCATGCTTGGAGATTGGGTTGGATGACATTCGCGTTGTAGGGATATGGGGTATGGGCGGCGCTGGCAAAACAACTCTTGCAAGAGTTGTTTATGAAAAAATCTCAGACAGATTTGAAATATGTTCATTTCTTCCCAATGTTAGAGAAACTCTGCAGACAAAAGGCCTAGTCTATTTGCAGAAAAGGCTTCTTTTTCGTCTTAGAATAAATGCGGAAATTCACGATGACCATGAAGGGATGGATATGATAAGAAAGCATTTCTACAATAAAAAGGTTCTTCTTGTCCTTGATGATTTAGATTGCACGACTCAATTCGAGAAGTTAGCTGAAAGTCTAGATTGGTTTGGTAAAGGTAGCAAAATAATTATCACAACGAGAAACAAGCACGTGCTTACTTCATGTGAAGCGAAAATATATGAGATGAAAGTGATGGAGGAAGATGAGTCTCTTCAACTCTTTTCGAAGGAAGCATTCAAGAAAGATGTTCCTGAAGAGGATTATTTGGAGTTGTCCAAATCTGTGGTTGCATATGCAGGAGGTCTTCCTTTGGCACTAAGCGTTTTGGGTTCTTTTCTTTTCGGAAGAAGTAAAGTTGAGTGGATCGACATTTTCAGTTCGAAGCAAATTTTGAATGAAAATATTCATCAAATCCTTAAAATAAGTTATGATGGATTAAATGAGAAAGAAAAAACAATATTTTTGGATATTGCTTGTTTTTTCAGGGGTTGGAGAAAAGATGTAGTGACCCAAGTGTTGAAAGGTTGTGATCTAAACCCTACAATTGAAATACAAGTGTTGATTGAAAGAACTTTACTGGTTGAGAGGGAAAGTCTTTTGGGATATCCCACTTTAGAGATGCACGTTTTATTTGAAGAGTTGGGTAGGGATATTATTCGCCAAGAATCTTTCAATGCTAGCAACCGTAGCAGGTTGTGGGAGTTTGAGAACATTAAGGAAGTATTGGAAAATAATACGGGATCTGAAGCAATACAAGTTATTGTTATGCAACCATTGTATGGGAGGTTGCCTAAAGTAAAAGTACACCCTGAAGCATTTTCAAAGATGAATAATATTAGATTGCTCATAATAGAAGACAGACATCATGCGCTCATCTTACCAAGGGGATTGAAATTTTCTAGTGCATTGAAAGTTGTTTGCTGGCGACAATTTCCTCTTGAAACTCTGCCACTTCCCTTGGATAAACTTGTTCATATTGAAATGCAAGACAGCAAAATAAAGAAACTTTGGAATGGTGAACAGCATATGGAAAAGTTGAAACGTATTGATCTGAGCGATTCTCACAGTTTGATTGAAACTCCAAACTTCTTAGGAGTTCCAAATTTAGAATATTTAAATCTCTCTAGGTGCGTATCCCTTGTTATGGTTCATTCCTCACTTGGAGAGTTGAAAAGACTTGTTGAGATTAACTTGAAGGGTTGTAGAAATCTTGAAATCCTACCAAGAAGATTGGAATCAAATTTTTTGGAAAGGTTAGATCTACATGAGTGTGGAAAAGTTGCGGTGCTCCCAAAGTTTGGGGAAGGTATGAATAAACTATCATATCTTGATGTGAGTAATACTGCTATGACTACACTTCCAGAATCGCTTGGTTCCTTGACTGGTCTTCGATATTTGGATTTGGGAGGGTGCAGAATTCTTGATCTTGACAAGTTGAAGACTCCCATAACTTGTCAAATTTCTAGCTTGGATGTAACTTCATTAACAGAGTTATGTTTAAATTGGTGTGGCTTGAATGATGGATCAATTCTTGATAATATTGGTGGTTTATCATCCCTCATTGCATTGGATCTAGGAGGAAATGATTTTGTTAATCTTCCCACGGGTTGCTTCTCTGGTCTCTTTGGACTTCTCTATCTTTTTTTGGATGATTGCAAAAGGCTCAAGTCATTACCATCGCTTTCAGCACGGTTGATTCGGTTAAGTGCAGCCGGCTGTGATTCAATGGAACCTTTATCAGATAGACAGTCATGGAATTTGGTTGCTTCAAGAGACCATGAGTATCGTGGGCGAATTGAATATGTAAATACTGATGAGAGGCGTGATGACGATGATGTTCATGATGCTATATTGTTGTTCAAGAACGTTAAGTCGGAATATCTGCCACAAAGAGATTTTGTTGCAATTATGCCAGCTGTATGGGAAATACCATCATGGTGTACCAATAAAGAATATTACCCTTTGGATGAGGGAAGAAAGGAATGTGAGATAAAAGTGGACATACCTCAACATTTCCGTGAAAGTGAATGGTTAGGAATTGTTGTATGCCTCCATTTCTCAGGAGGCGCTGGTGGGATGTGGTGGAGTAGCAAAGGTGCAGAAGATGCTGATTACATACGCAAAGACTGGGCGCATGTAATTCCCATGAGGTTCTCAAAATCAACTAATCCTCAACTGTGCTGCATAATGATGGTGTTGGAATTAAATGAGAAAACATGTTGGCAACATCTAACACCTCATAACAACTCCCTTCACATTTTACTTTCTACTTTCGGAAGTCAGATCTGTCCCCCCAGCTCGCAAATATGGGGATGTGGGTGGAGAGTGATATGTAAAGAAGAGATGCAAGTGAATGTCACCCCACCACCACTACTTCCTACACCTCATCATCAGGTCATGCTTTCACAAAGACTCCTTCGTGAAGTAGTTAGAGACATGCATGTAGCAGAGAGAAAACAGATTGCAGTTTGGAGACAATCAAGAGCTCGAAGCCCTGCAATGGCCAACACTGTGCAGGGAGAATCTTCCGCAACCTCTTGTGCTTCTAATTCGACTCCGACTTGGAAATATGATGTTTTCTTGAGTTTTAGAGGAGAAGACACTCGCTTGAACTTTACAGATCACTTGTATCATGCTCTCAAAAGAAGTGGGATCACAGCTTATAGGGATGATGAAGAACTTGAGAGAGGACAAGTTATATCACCACAGCGCATTCAATCAATTAAGGATTCTCTCTGTGCAGTTGTCGTTCTCTCTGAAAATTATGCAAAGTCCACCTGGTGTTTGGATGAACTCCAAAAAATTCTTGAAAGCATGAATGGAATGGGTCGACCAGTTTTCCCCATATTCTATGAGGTAGATCCTTCTGATGTAAGACATCAAATAAAAAGTTTCGTAGAAGCTCTGGCTGAACATGAAAACACATTCAGAAAAAACGTCAACAAAGTGCAGAATTGGAAAAATGCGTTGTCTGAAATTGGCAAATTATCTGGTTGGAAGACCCGAAATCAGCATGAAGCAAATCTTATCGCAGATGTGGTGGGAAAGATATCTCGTTTTACTTTTAAGGTACCATCTTACGATGATAATCTGGTTAACATACAGCCAAGAATGATTGATCTAATGCCATGCTTGGAGATTGGGAGGGATAACGTTTGCCTTGTAGGAATATGGGGGATGAGTGGTGCTGGTAAAACAACTCTAGCAAGAGTGGTTTTTGAAAAAATCTCTGACGAATTTGAAGTGTGTTGCTTTCTTCCTAATGTTGGAGAAACTTTGCGAAGAGAAGGCCTAGTTTCTTTGCAAAAAAAAATTATTTCTCATCTAAGAATAAGAAACATGAAAATTTATGATGATCATGAAGGAATGAGCATGATGATAAGACAGCTTTTCTGTAATAAAAAGGTTCTTCTTGTCCTTGACGATTTAGATCATACGAGTCAATTGAAGAATTTGACTAAAAGTCCAAATTGGTTTGGCAAAGGAAGCAGAATAATTATTACTACAAGAGATATGCATGTGCTCACCTCAACTGGAGGGAAAATATATAGGATGAGAGCCATGGAGAAAGATGAGTCTCTTCAACTCTTTTCTAAGATAGCATTCAAGAAAGATCATCCTGAAAAGGATTATTTGGAGTTGTCTGAATCTGTGGTTGCATATGCAGGAGGTCTTCCTTTGGCACTTAAAGTTTTGGGTTCTTTTCTTTGCAAAAGAAGTGAAGATGAGTGGACCAATACTTTAGATAGATTGAAGCAAATTGAAAAAAGTGGAGTTCTTGATCAAATACTTAAAATGAGTTATGATGGATTGAATGAGAAAGAAAAGACAATATTTTTAGATATTGCTTGTTTCTTCAGGGGTTGGATGAAACATAAAGTAAACCAAGTTTTGGAAGGCTGTGATCTAAATCCAACAAATGAAAAAATTCTACTTGTTGAAACAAAACATCTTTGGGATGATCCCACTTTAGAGATGCATGATTTACTTGAAGATTTGGGCAGAAATATTATTCATCGAGAATCTCCCAATGTCGGGAAGCGTAGCAGGTTGTGGGAGTTTGAGGACATTAAGGAAGTATTGGAAAATAACACAGGATCTGAAGCAATCCAAGCAATTGTTATGCAAGATTATTGGAACTCAGATGCAAGAATAAAAGTGCATCCTGAAGCCTTTTCAAAGTTGAATAATATTAGATTATTGATCTTATCTGAGAATATTGATGTTCAACTCAGATTACCAAGGGAATTGGAACTTTCTAGCCTCCAATGTCCTTTTAGTGCATTGAAAGTTGTTCGATGGCCATCATTTCCTTTCGAAACTCTCCCACTTCCATTGCATAAACTTGTTGATCTTCAAATGCCTTCTAGCAAAATAAAGAAACTTTGGAATGGCATAGAGTTCATGAAAAAGTTGAAACGCATTGATCTAAGCTATTCTAACAAATTGATCGAAACTCCAGACTTCTCAGGGGTTCCATATTTAGAACAATTAATTCTTTTGGGATGCGAAGCCCTTGTCGAGGTTCATCCTTCTCTAGGAGAGTTGATAATGCTTGTCAAGGTGGACTTGTCTTCCTGTGAAAATCTTGAAATCCTACCAAGTAAATTGGAAACAAATTCTCTAGAAAGGTTAGATCTAAGTTGCTGTGGAAAAGTTGCGATGCTACCAGAGATTGGGGAAGGCATGGAAAAATTATCATATCTTGATGTGAGTGATACTGCTATAACTACACTTCCAAAATCACTTGGTTCCTTAACTGGTCTTGGATATTTGGATTTGAGTGACTGCAAAATTCCTGATCTTGGCAAGTTATTGAAGATTTCTGTGACACGCCAAATTTATGGCTTGAATCTAACATCATTAACGGAGTTATATTTAAGGCGGTGTGGCTTAAATGATGGATCAATTCCTGATAATCTTGACAGTTTATCATCACTCATTGTATTGGATCTAAGAGGAAATGATTTTGTTAATCTACCCACGGGCTGCTTCTCTAGTCTCTTTCGACTTCTCTATCTTTTTTTGGATGGTTGCAAAAGGCTCAAGTCATTGCCATGGCTTCCAGCACGGGTGATTCGGTTAAGTGCAGACAGTTGTGATTCAATGGAACCTTTATCAGATGAACAACTATGGAATTTGGTTGTTTCACGTGACCATGAGTATCGTGGGCGAACTGAATATGTAAAAAGTTATGAGATGTCTAGTGATATACATCCCCCATTTTTCATGTTGGAGCACGTTAAGCCGGAATTTCTTCCCCAAAGAGATTTTCTGGCAATCATACCAGGATGTGAAATACCATCTTGGTATACAAATAAAGAATATTATCCTTTGGAAGAGAACGTTAAGGAATGTGAGATAAAAGTGGAGATACCTCAGCATTTCCGTGAAAGTGAGTGGTTACGAATGGTTGTATGCCTCCATGTCTCAGGTGAGGGTGGTGGGATTTGGTGGAGTAGTAAAGGTGCAGAAGATGATGATTATATATGCAAAGAGTGGGGGCATGTTATTGACCCTAGTGAGCGTGATGATGATGAGACTCGTCCTAAACGGTGCATAATAATGGTGTTGGAATTAAATGAGAAAACATGTTGGCAACATCTCACATCTCATAACAACTCCCTTCACATTTTACTTTCTACTTCCGAAAGCATTGGTGGTCAATTTGACATGAAAATAATGGGATGTGGCTGGTGGAGAGTGATACGTAAAGAAGAGATGCCAGAGTGTTGCATTCTCAATCATTTCACCCAACCACCACTACTTGCTCCTCCTCGTCATCAGGTCATGCTTTCAGAAACTCTCCTTGACCAAGTTGCTAGAAAAGTGTGGGGGAAAGGGAGAAGACAGATAAGAGGTGCGTGA 6738 0.3871 MANTALGESSSTSGAPNSSLTWKYDVFLSSSGEDTVLKFTDHLYHALTRHGIRTFRDDEGLQRGEVISTQLIQAIKDSRCAVVVLSQKYADSKWCLNELQQTLESRKEMGGRVFPIFYDVDPSDVRNQRKRVGEALANHEKRLRGDTGKTVQIWRNSLSEIGNMIGWDARSRPQAQLIEEVVGEVWKYLCSKLPFYDNNLVGIERRMVDLMSCLEIGLDDIRVVGIWGMGGAGKTTLARVVYEKISDRFEICSFLPNVRETLQTKGLVYLQKRLLFRLRINAEIHDDHEGMDMIRKHFYNKKVLLVLDDLDCTTQFEKLAESLDWFGKGSKIIITTRNKHVLTSCEAKIYEMKVMEEDESLQLFSKEAFKKDVPEEDYLELSKSVVAYAGGLPLALSVLGSFLFGRSKVEWIDIFSSKQILNENIHQILKISYDGLNEKEKTIFLDIACFFRGWRKDVVTQVLKGCDLNPTIEIQVLIERTLLVERESLLGYPTLEMHVLFEELGRDIIRQESFNASNRSRLWEFENIKEVLENNTGSEAIQVIVMQPLYGRLPKVKVHPEAFSKMNNIRLLIIEDRHHALILPRGLKFSSALKVVCWRQFPLETLPLPLDKLVHIEMQDSKIKKLWNGEQHMEKLKRIDLSDSHSLIETPNFLGVPNLEYLNLSRCVSLVMVHSSLGELKRLVEINLKGCRNLEILPRRLESNFLERLDLHECGKVAVLPKFGEGMNKLSYLDVSNTAMTTLPESLGSLTGLRYLDLGGCRILDLDKLKTPITCQISSLDVTSLTELCLNWCGLNDGSILDNIGGLSSLIALDLGGNDFVNLPTGCFSGLFGLLYLFLDDCKRLKSLPSLSARLIRLSAAGCDSMEPLSDRQSWNLVASRDHEYRGRIEYVNTDERRDDDDVHDAILLFKNVKSEYLPQRDFVAIMPAVWEIPSWCTNKEYYPLDEGRKECEIKVDIPQHFRESEWLGIVVCLHFSGGAGGMWWSSKGAEDADYIRKDWAHVIPMRFSKSTNPQLCCIMMVLELNEKTCWQHLTPHNNSLHILLSTFGSQICPPSSQIWGCGWRVICKEEMQVNVTPPPLLPTPHHQVMLSQRLLREVVRDMHVAERKQIAVWRQSRARSPAMANTVQGESSATSCASNSTPTWKYDVFLSFRGEDTRLNFTDHLYHALKRSGITAYRDDEELERGQVISPQRIQSIKDSLCAVVVLSENYAKSTWCLDELQKILESMNGMGRPVFPIFYEVDPSDVRHQIKSFVEALAEHENTFRKNVNKVQNWKNALSEIGKLSGWKTRNQHEANLIADVVGKISRFTFKVPSYDDNLVNIQPRMIDLMPCLEIGRDNVCLVGIWGMSGAGKTTLARVVFEKISDEFEVCCFLPNVGETLRREGLVSLQKKIISHLRIRNMKIYDDHEGMSMMIRQLFCNKKVLLVLDDLDHTSQLKNLTKSPNWFGKGSRIIITTRDMHVLTSTGGKIYRMRAMEKDESLQLFSKIAFKKDHPEKDYLELSESVVAYAGGLPLALKVLGSFLCKRSEDEWTNTLDRLKQIEKSGVLDQILKMSYDGLNEKEKTIFLDIACFFRGWMKHKVNQVLEGCDLNPTNEKILLVETKHLWDDPTLEMHDLLEDLGRNIIHRESPNVGKRSRLWEFEDIKEVLENNTGSEAIQAIVMQDYWNSDARIKVHPEAFSKLNNIRLLILSENIDVQLRLPRELELSSLQCPFSALKVVRWPSFPFETLPLPLHKLVDLQMPSSKIKKLWNGIEFMKKLKRIDLSYSNKLIETPDFSGVPYLEQLILLGCEALVEVHPSLGELIMLVKVDLSSCENLEILPSKLETNSLERLDLSCCGKVAMLPEIGEGMEKLSYLDVSDTAITTLPKSLGSLTGLGYLDLSDCKIPDLGKLLKISVTRQIYGLNLTSLTELYLRRCGLNDGSIPDNLDSLSSLIVLDLRGNDFVNLPTGCFSSLFRLLYLFLDGCKRLKSLPWLPARVIRLSADSCDSMEPLSDEQLWNLVVSRDHEYRGRTEYVKSYEMSSDIHPPFFMLEHVKPEFLPQRDFLAIIPGCEIPSWYTNKEYYPLEENVKECEIKVEIPQHFRESEWLRMVVCLHVSGEGGGIWWSSKGAEDDDYICKEWGHVIDPSERDDDETRPKRCIIMVLELNEKTCWQHLTSHNNSLHILLSTSESIGGQFDMKIMGCGWWRVIRKEEMPECCILNHFTQPPLLAPPRHQVMLSETLLDQVARKVWGKGRRQIRGA 2245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3321 2245 Gene3D - 1311 1476 IPR027417 -
Prci2g3321 2245 Gene3D - 191 355 IPR027417 -
Prci2g3321 2245 ProSiteProfiles TIR domain profile. 22 193 IPR000157 GO:0007165
Prci2g3321 2245 SUPERFAMILY L domain-like 1616 1977 - -
Prci2g3321 2245 Gene3D Ribonuclease Inhibitor 552 704 IPR032675 -
Prci2g3321 2245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 447 IPR027417 -
Prci2g3321 2245 SMART LRR_typ_2 1934 1957 IPR003591 -
Prci2g3321 2245 SMART LRR_typ_2 807 830 IPR003591 -
Prci2g3321 2245 SMART LRR_typ_2 1853 1876 IPR003591 -
Prci2g3321 2245 SMART LRR_typ_2 727 750 IPR003591 -
Prci2g3321 2245 SMART LRR_typ_2 1909 1933 IPR003591 -
Prci2g3321 2245 Gene3D - 18 190 IPR035897 -
Prci2g3321 2245 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 167 IPR035897 -
Prci2g3321 2245 SUPERFAMILY Toll/Interleukin receptor TIR domain 1138 1289 IPR035897 -
Prci2g3321 2245 SMART till_3 23 164 IPR000157 GO:0007165
Prci2g3321 2245 SMART till_3 1146 1286 IPR000157 GO:0007165
Prci2g3321 2245 Pfam TIR domain 1146 1308 IPR000157 GO:0007165
Prci2g3321 2245 Pfam TIR domain 23 189 IPR000157 GO:0007165
Prci2g3321 2245 Gene3D Ribonuclease Inhibitor 705 878 IPR032675 -
Prci2g3321 2245 Gene3D Ribonuclease Inhibitor 1669 1850 IPR032675 -
Prci2g3321 2245 Pfam Leucine rich repeat 1831 1889 IPR001611 GO:0005515
Prci2g3321 2245 Pfam Leucine rich repeat 706 763 IPR001611 GO:0005515
Prci2g3321 2245 FunFam Disease resistance protein (TIR-NBS-LRR class) 1143 1313 - -
Prci2g3321 2245 PRINTS Disease resistance protein signature 631 647 - -
Prci2g3321 2245 PRINTS Disease resistance protein signature 297 311 - -
Prci2g3321 2245 PRINTS Disease resistance protein signature 223 238 - -
Prci2g3321 2245 PRINTS Disease resistance protein signature 389 403 - -
Prci2g3321 2245 FunFam Disease resistance protein (TIR-NBS-LRR class) 1479 1562 - -
Prci2g3321 2245 Gene3D Ribonuclease Inhibitor 1851 2007 IPR032675 -
Prci2g3321 2245 ProSiteProfiles TIR domain profile. 1145 1311 IPR000157 GO:0007165
Prci2g3321 2245 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 191 - -
Prci2g3321 2245 Pfam Leucine Rich Repeat 1738 1756 IPR011713 -
Prci2g3321 2245 SUPERFAMILY "Winged helix" DNA-binding domain 424 533 IPR036390 -
Prci2g3321 2245 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 764 IPR044974 GO:0006952
Prci2g3321 2245 Gene3D - 1143 1310 IPR035897 -
Prci2g3321 2245 SUPERFAMILY L domain-like 557 857 - -
Prci2g3321 2245 Pfam NB-ARC domain 220 416 IPR002182 GO:0043531
Prci2g3321 2245 Pfam NB-ARC domain 1343 1558 IPR002182 GO:0043531
Prci2g3321 2245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1313 1572 IPR027417 -
Prci2g3321 2245 Gene3D - 1477 1562 IPR042197 -
Prci2g3321 2245 Gene3D - 356 437 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3321 Prci-Chr2 42230368 42244679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3321 16 844 WRKY Transcription Factor Family AT4G12020 30.094 2.56e-83 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3321 - - pcin:129303275 4471.77