Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3315 ATGGGTGGACGAGTTTTTCCCATCTTCTATGATGTAGATCCAGCTGATGTAAGAAATCAAAGAAAAAGATTTGGAGAGGCTCTGTCGGAACATGAGAGATTCAGAGGAAACATGGACAAAGTGACGAATTGGAGAAACTCTTTGTCTGACATTGGCAACTTGTCTGGTTGGGACACCAGACTTCGGCCTGAAGCGCTCCTTATTGATGAAGTAGTTGGAGCAGTATGGACATATTTATGTTCCAAGTTACCATCTTATGATGATAATCTGGTTGGCATAGGACGAAGAATGGTTGATCTAATGTCATGCTTGGAGATTGGATTGGATGACATTCGCTTTGTGGGCATATGGGGTATGGGCGGTTCTGGCAAAACAACTCTTGCAAGAGTTGTTTATGAAGAAATCTCAGGCAGATTTGAAATGTGTTCCTTTCTAGCCAATGTTAGAAAAACTTTGCAAAAAGAAGGCCCAGTCTCTTTGCAGAAAAGTCTTCTTTTTGATCTTGGACTAAAAACAAAAATTCATGATGACTATGCAGGAATGAAGATGATAAGAAAGCTTGTCTGCAATAAAAAGGTTCTCCTTGTCCTTGACGATTTAGATAATATGAGTCCATTAGAGAAGTTGGTTGAAAGTCCAAATGGGTTTGGTAAAGGAAGCAGAATAATTATCACAGCAAGAGATAAGCATGTGCTCACCTCATGTGGAGAGAAAATATATGAGATAAAAATCATGGAGAAACATGAGTCTCTTCAACTCTTTTCTAAGAAAGCATTCAAGAAAGATCATCCTGAAGAAGATTATTTGGAGTTGTCCGAATCTGTGGTTGCATGTGCAGGAGGTCTTCCTTTGGCACTTGAAGTTTTGGGTTCTTATTTTCGTGGAAGACCTAAAGATGATTGGACTGATGCTTTAGATAAATTGAAACAAACTCCAAAGAATGATATTCTTCGACAACTTAGAATAAGTTTTGATGGATTGGATGAGAAAGAAAAGACAATATTTTTGGACATTGCTTGTTTTTTCAGGGGACGGAGAAAAGATGATGTGACCCAAGTTTTGAAAGGTTGTGATCTAAACCCAAAAACTGGAATAAAGGCCTTGATTGAAAAAGCTCTGCTTGTTGAAACAGAACATCCCTCATTGGGATATCCCACTTTAGAGATGCATGATTTACTTGGACAACTGGGTAGGGATATTATTCAACAGGAATCTCCCAATATTGGCAAGCGTAGCAGGTTGTGGGAGTTAGAGGATATTAAGGAAGTATTGGAAAACAAGAAGGGATCTGAAGCAATAGAAGCTATTGTTATGCAAGATTATTATTTCAAACCAGGAAAAATAAATGTACACCTTAAAGCCTTTTCAAAGATGAGTAATATTAGATTACTTATCATATCATGGAATACTGATATTCTCGTCTTACCAAAGAAATTGAAACTTTCTCATGTCCAATGCCTAATTGGCGCAGCAAAAGTTGTTCAATGGCCATCATTTCCTTTTGAAACTCTCCCACTTCGTTTGGGCAAACTTGCTCACATTGAAATGTGTCATAGCAAAATTAAGCAACTATGGGATGGCATACAGTTTATGAAGAAGTTGAAATACATCAATCTGAGCAATTCTCAAGATTTGACCAAAACTCCGGATTTCTCAGGGGTTCCATATTTGGAACATTTAATACTTCAAGGGTGCAAATTCCTTGAAGAGGTTGATCCCTCGCTTGGAGATTTGAAACTACTGATCACAGTGAATTTGTCTTTCTGTGAAAATCTTATATGTCTTCCAGCGAAAATGGAAACAAATTCTCTGGAAAAATTAGATCTTCGGTGTTGTACAAAAGTTCCAGCGCTACCAGAATTTGGGGAAGGTATGAAAAATTTAAAGTATCTTGATGTGAGAAATACAGCGATAACTGCATTTCCTAAATTTCTTGGATCTTTGACTGGTCTTGAATATTTTAATTTTACGAGGAGTTGA 1980 0.3747 MGGRVFPIFYDVDPADVRNQRKRFGEALSEHERFRGNMDKVTNWRNSLSDIGNLSGWDTRLRPEALLIDEVVGAVWTYLCSKLPSYDDNLVGIGRRMVDLMSCLEIGLDDIRFVGIWGMGGSGKTTLARVVYEEISGRFEMCSFLANVRKTLQKEGPVSLQKSLLFDLGLKTKIHDDYAGMKMIRKLVCNKKVLLVLDDLDNMSPLEKLVESPNGFGKGSRIIITARDKHVLTSCGEKIYEIKIMEKHESLQLFSKKAFKKDHPEEDYLELSESVVACAGGLPLALEVLGSYFRGRPKDDWTDALDKLKQTPKNDILRQLRISFDGLDEKEKTIFLDIACFFRGRRKDDVTQVLKGCDLNPKTGIKALIEKALLVETEHPSLGYPTLEMHDLLGQLGRDIIQQESPNIGKRSRLWELEDIKEVLENKKGSEAIEAIVMQDYYFKPGKINVHLKAFSKMSNIRLLIISWNTDILVLPKKLKLSHVQCLIGAAKVVQWPSFPFETLPLRLGKLAHIEMCHSKIKQLWDGIQFMKKLKYINLSNSQDLTKTPDFSGVPYLEHLILQGCKFLEEVDPSLGDLKLLITVNLSFCENLICLPAKMETNSLEKLDLRCCTKVPALPEFGEGMKNLKYLDVRNTAITAFPKFLGSLTGLEYFNFTRS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3315 659 Gene3D - 246 328 IPR042197 -
Prci2g3315 659 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 621 IPR044974 GO:0006952
Prci2g3315 659 Pfam NB-ARC domain 110 312 IPR002182 GO:0043531
Prci2g3315 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 338 IPR027417 -
Prci2g3315 659 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 57 IPR035897 -
Prci2g3315 659 Pfam TIR domain 4 89 IPR000157 GO:0007165
Prci2g3315 659 Gene3D - 81 245 IPR027417 -
Prci2g3315 659 Gene3D - 1 80 IPR035897 -
Prci2g3315 659 PRINTS Disease resistance protein signature 187 201 - -
Prci2g3315 659 PRINTS Disease resistance protein signature 529 545 - -
Prci2g3315 659 PRINTS Disease resistance protein signature 113 128 - -
Prci2g3315 659 PRINTS Disease resistance protein signature 279 293 - -
Prci2g3315 659 SUPERFAMILY L domain-like 389 657 - -
Prci2g3315 659 Gene3D Ribonuclease Inhibitor 418 659 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3315 Prci-Chr2 42169939 42173493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3315 5 659 WRKY Transcription Factor Family AT4G12020 30.792 8.11e-79 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3315 - - pcin:129303685 1309.28