Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3311 ATGGCGAACACTGCCCTGGGAGAATCTTCCTCAACCTCTGGTACTTCTAATTCAACTCCGACTTGGAAATATGACGTCTTTCTAAGTTTTAGAGGAGAAGATACTCGCTTGAAGTTTACAGATCACTTGTATCATGCTCTCACTAGAAGGGGGGTCAGGACTTTCAGAGATGATAAAGGACTTGAGAGAGGAGAAGTTATATCAGCACAGCTCATTCAAGCAATTAAGGACTCTCGCTGTGCAGTTGTGGTTCTCTCTCAAAATTACGCAAATTCCAAATGGTGTTTGAATGAACTACAACAAATTCTTGAAAGCAGGAAAGAAATGGGTGGACGAGTTTTTCCCATCTTCTATGATGTAGATCCAGCTGATGTAAGAAATCAAAGAAAAAGATTTGGAGAGGCTCTGTCGGAACATGAGAGATTCAGAGGAAACATGGACAAAGTGACGAATTGGAGAAACTCTTTGTCTGACATTGGCAACTTGTCTGGTTGGGACACCAGACTTCGGCCTGAAGCGCTCCTTATTGATGAAGTAGTTGGAGCAGTATGGACATATTTATGTTCCAAGTTACCATCTTATGATGATAATCTGGTTGGCATAGGACGAAGAATGGTTGATCTAATGTCATGCTTGGAGATTGGATTGGATGACATTCGCTTTGTGGGCATATGGGGTATGGGCGGTTCTGGCAAAACAACTCTTGCAAGAGTTGTTTATGAAGAAATCTCAGGCAGATTTGAAATGTGTTCCTTTCTAGCCAATGTTAGAAAAACTTTGCAAAAAGAAGGCCCAGTCTCTTTGCAGAAAAGTCTTCTTTTTGATCTTGGACTAAAAACAAAAATTCATGATGACTATGCAGGAATGAAGATGATAAGAAAGCTTGTCTGCAATAAAAAGGTTCTTCTTGTCCTTGACGATTTAGATAATATGAGTCCATTAGAGAAGTTGGTTGAAAGTCCAAATGGGTTTGGTAAAGGAAGCAGAATAATTATCACAGCAAGAGATAAGCATGTGCTCACCTCATGTGGAGAGAAAATATATGAGATAAAAACCATGGAGAAACATGAGTCTCTTCAACTCTTTTCTAAGAAAGCATTCAAGAAAGATCATCCTGAAGAAGATTATTTGGAGTTGTCCGAATCTGTGGTTGCATGTGCAGGAGGTCTTCCTTTGGCACTTAAAGTTTTGGGTTCTTATTTTCGTGGAAGACCTAAAGATGATTGGACTGATGCTTTAGATAAATTGAAACAAACTCCAAAGGATGATATTCTTCGACAACTTAGAATAAGTTTTGATGGATTGGATGAGAAAGAAAAGACAATATTTTTGGACATTGCTTGTTTTTTCAGGGGACGGAGAAAAGATGATGTGACCCAAGTTTTGAAAGGTTGTGATCTAAACCCAAAAACTGGAATAAAGGCCTTGATTGAAAAAGCTCTGCTTGTTGAAACAGAACATCCCTCATTGGGATATCCCACTTTAGAGATGCATGATTTACTTGGACAACTGGGTAGGGATATTATTCAACAGGAATCTCCCAATATTGGCAAGCGTAGCAGGTTGTGGGAGTTAGAGGATATTAAGGAAGTATTGGAAAACAAGAAGGGATCTGAAGCAATAGAAGCTATTGTTATGCAAGATTATTATTTCAAACCAGGAAAAATAAATGTACACCTTAAAGCCTTTTCAAAGATGAGTAATATTAGATTACTTATCATATCATGGAATACTGATATTCTCGTCTTACCAAAGAAATTGAAACTTTCTCATGTCCAATGCCTAATTGGCGCAGCAAAAGTTGTTCAATGGCCATCATTTCCTTTTGAAACTCTCCCACTTCGTTTGGGCAAACTTGCTCACATTGAAATGTGTCATAGCAAAATTAAGCAACTATGGGATGGCATACATTTTATGAAGAAGTTGAAATACATCAATCTGAGCAATTCTCAAGATTTGACCAAAACTCCGGATTTCTCAGGGGTTCCATATTTGGAACATTTAATACTTCAAGGGTGCAAATTCCTTGAAGAGGTTGATCCCTCGCTTGGAGATTTGAAACTACTGATCACAGTGAATTTGTCTTTCTGTGAAAATCTTATATGTCTTCCAGCGAAAATGGAAACAAATTCTCTGGAAAAATTAGATCTTCGGTGTTGTACAAAAGTTCCAGCGCTACCAGAATTTGGGGAAGGTATGAAAAATTTAAAGTATCTTGATGTGAGAAATACAGCGATAACTACATTTCCTAAATTTCTTGGATCTTTGACTGGTCTTGAATATTTTAATTTTACGAGGAGTTGA 2304 0.3793 MANTALGESSSTSGTSNSTPTWKYDVFLSFRGEDTRLKFTDHLYHALTRRGVRTFRDDKGLERGEVISAQLIQAIKDSRCAVVVLSQNYANSKWCLNELQQILESRKEMGGRVFPIFYDVDPADVRNQRKRFGEALSEHERFRGNMDKVTNWRNSLSDIGNLSGWDTRLRPEALLIDEVVGAVWTYLCSKLPSYDDNLVGIGRRMVDLMSCLEIGLDDIRFVGIWGMGGSGKTTLARVVYEEISGRFEMCSFLANVRKTLQKEGPVSLQKSLLFDLGLKTKIHDDYAGMKMIRKLVCNKKVLLVLDDLDNMSPLEKLVESPNGFGKGSRIIITARDKHVLTSCGEKIYEIKTMEKHESLQLFSKKAFKKDHPEEDYLELSESVVACAGGLPLALKVLGSYFRGRPKDDWTDALDKLKQTPKDDILRQLRISFDGLDEKEKTIFLDIACFFRGRRKDDVTQVLKGCDLNPKTGIKALIEKALLVETEHPSLGYPTLEMHDLLGQLGRDIIQQESPNIGKRSRLWELEDIKEVLENKKGSEAIEAIVMQDYYFKPGKINVHLKAFSKMSNIRLLIISWNTDILVLPKKLKLSHVQCLIGAAKVVQWPSFPFETLPLRLGKLAHIEMCHSKIKQLWDGIHFMKKLKYINLSNSQDLTKTPDFSGVPYLEHLILQGCKFLEEVDPSLGDLKLLITVNLSFCENLICLPAKMETNSLEKLDLRCCTKVPALPEFGEGMKNLKYLDVRNTAITTFPKFLGSLTGLEYFNFTRS 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3311 767 SMART till_3 23 162 IPR000157 GO:0007165
Prci2g3311 767 Pfam TIR domain 23 197 IPR000157 GO:0007165
Prci2g3311 767 ProSiteProfiles TIR domain profile. 22 191 IPR000157 GO:0007165
Prci2g3311 767 Gene3D Ribonuclease Inhibitor 526 767 IPR032675 -
Prci2g3311 767 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 189 - -
Prci2g3311 767 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 729 IPR044974 GO:0006952
Prci2g3311 767 Gene3D - 353 436 IPR042197 -
Prci2g3311 767 Gene3D - 188 352 IPR027417 -
Prci2g3311 767 Gene3D - 16 187 IPR035897 -
Prci2g3311 767 Pfam NB-ARC domain 218 420 IPR002182 GO:0043531
Prci2g3311 767 SUPERFAMILY L domain-like 497 765 - -
Prci2g3311 767 PRINTS Disease resistance protein signature 295 309 - -
Prci2g3311 767 PRINTS Disease resistance protein signature 221 236 - -
Prci2g3311 767 PRINTS Disease resistance protein signature 387 401 - -
Prci2g3311 767 PRINTS Disease resistance protein signature 637 653 - -
Prci2g3311 767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 446 IPR027417 -
Prci2g3311 767 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 165 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3311 Prci-Chr2 42035096 42038672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3311 24 767 WRKY Transcription Factor Family AT4G12020 30.052 2.82e-84 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3311 - - pcin:129302232 1520.37