Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g3303 | ATGGCGTATAGGGTCAAAGGAGAATCATTTTCAACCTCTTCTAATTCAACTCCAAAATGGAAACATGATGTTTTTTTGAGTTTTGCAGGAAAAGATACTCGCTTGAATTTTACAGATCACTTGTATTCTGCTTTTAGTCAACGTGGCATACGAGCTTTTAAGGATGATAAAGGAATAGAGAGAGGAGAAGTCATATCACAACAATTATTTCAAGCAATTGAAGACTCTCTCGTTGCTGTTGTTGTTTTCTCTCAAAATTATGCAAATGCTGCATGGTGTTTGGATGAACTTCAAAAGATCATTGACTGCAGAAATAAATTGGGTCAACAAGTTTTCCCTATTTTTTATGGTGTAGATCCGTCCGATGTACGGCATTTAAGAAAAAGTTTTGCATTAGCTTTAGCTAAACATGAAGAGAGATTTAAAGGAAGCAAAGACAAACTGCAGAAATGGAAAAATGCTTTGTTGGAGATTAGCAATTTGTCAGGTTGGGACACGAGTGGTCGGCCTGAAACACAAGTTATCCAAGACGTTGTTGAAGCAATATGGAACAAACTATGTTCTAAATTGCCATCTTATGATGATTATAATTTAGTTGGAATGGTCTCAAGGATAGTTGAAATAAATTCACTTTTGAAGATAGGGTTGGGCGAGGTTCTTTTTGTAGGCATATGGGGCATGGGCGGTATAGGTAAAACAACTCTTGCTAGAGTTGTTTATGAAAACATCTCTGACCAATTTGAAATATGTTGCTTTCTTGCTGATATTAGGGAAACTTCTGAAAGAAAAGGCAAAGTTTATTTACAAAGAGAGCTTCTTTCACATGTAAGTAATATTAAAATTAAGAATGAGTTCGAAGGAAAGAAGGAAATAAGAAAATACTTTTGGAATAAAATGGTTCTCCTTGTTCTTGATGATATAAATCATGTGAGTCAATTGGGTAATTTGGCTGCTATTCCAGAGTGGTTTGGTGAGGGTAGTAGAGTAATTATAACAACAAGAGATAAGCATTTGTTGACTTCACATGGAGTTCATGGAATATATGAGATTGAACCCATGAAAGAAGATGAATCTCTCAAGATCTTTTCAAAGGAAGCATTCAAAAAAGATCATCCTGAAGAGGGCTATGTGGAATTGTCTAAATCTGTGGTTGAATATGCTGGTGGTCTTCCTTTGGCGCTACAGGTTTTAGGTTCTTTTCTTCACGGAAGAAGTGTACTTGAGTGGGAAGATGCTTTAGACAGATTGAAACAAATTTCAGATAAGGATGTTTTTCAGATTCTTAAAATTAGCTATGATGGATTAAATGATGAAGAGAAGGCATTATTCTTGGATATTGCATGCTTTTTCAAGGGATGGGAGAAAGATGAAGTAATCCAAATTTTGAAAAATACTGGTCTTCATTCGTCAATTGGAATAAGTATCCTCATTGAAAAAGCTTTGCTAGTTGAACACCATACTGATTTTGGAACATGCCGTTTAGAGATGCATGATTTATTTCAAGAAATGGGCAGGAATATAGTTTATCAAGAATCTCCTAGCATTGCTTGCAGACGCAGTAGACTGTGGAAGATCGAGGACATTGATGAAGTATTGGAAAACACTATTGGAACTGAAGCAATACAAAGCATTGTGTTAGATTCCTCACAACGGGATGATCCTGAAGTCTATTGGGAACCTCATGCTTTTTCGAAGTTGTTTAATCTCAGATTACTCGTCATTCGAAGAAGATTGGAACTTCCCAATGGTCTCAAATGCCTCTCTAGTGCATTAAGAGTTATTCAATGGCAATTTTGCCCTCTAGAAGCTCTTCCGCTCGGGACACCATTGAATAAACTAGTTGATATTGAAATGCAACAAAGTAATATAAAGCAACTTTGGTACGGCGTACAGCTTGTCAGCGTGAATTTGTGTGGATGCACAAGTCTTAAAGTCATTCCAAGAAAATTGGAAACGAATTCATTGGAGAAGTTACTCCTTAGGCGTTGTTCTGAAGTTTCAATGCTCCCAGAGTTTGGGGAAGGCATGAAAACATTATCATTGCTTGACGTGAGTTATACTGCTGTAAGGGGACTTCCTCAGTCATTTGGATTTTTGACCGGTCTTAGAGATTTGAAAATGAGAAATTGTGAACATCTTGTTTTGCGCTTGTCTGTCTTCCACCATTTGAAGAATCTAAAAACGGTTGACATGTGTGGTTGCTTAAAACTTTCCAAGGGGCCAAAAAGACTGAATGAAATCGTAGCCTCGGAAAAACACGACATGAGTGAAAATTTCAGAACAGACATGACTCTGTTCAGTGCTATAGTAAGCAATCAAGTCTTCAGCTTTAATCCATCGGCAATAACAGAGTTAGACTTAAGCGCTTGTGGCCTCAGTGATGGATCAATTGTTGAACATTTCAGTGGTCTCTCGTCATTACTTGTGTTAAATCTTGGAGGGAATGATTTTGTTATTCTACCTGATGGTTGGATCTGTAGTTCTATTCGACTACGCTTTCTTTTTCTGAGTGCCTGCAGGAGGCTTAAGTCACTGCCCAAGCTTCCACCACAGTTAATTCGATTAGACGCAGTGGGCTGTAATTCAATGGAACCTTTATCAGAAAGACAATTATGGAATATGGTTTCATCGCTTCACCATGAGTATCGCCATCAAGTTAAATATGAGAACACACTGCTCAAGCACATTGAGGTAGCAGAATATTTTCCCCAGAGAGATTTTTTCGCAATTATTCGGGGATCTGAGATACCATCATGGTTCCCAAATAACGATTATGTTGCTTCAGATTTGTATAGATCTAAATGTGAGTTAGTGATGAACATTCCTCAGCATGTTCGTGCAAGTGAATGGTCCGGACTTGCGGTTTGCATCAAGTTACAAATCATGCCGTGTGTATTTGATAGTTTTCACATTTCATGGAGTAGTAAAGCTCCTGAAGATGATCATTACGTTAGGAAAAAGTGGGCCCATGAAATTCGCGTTGTCGAAAAGGAGGGTCCTCACATCTGCATAATGGTGCTGCATTTGAACGAGAAAACATGTTGGCAACATCTAAGAGGTCATGATAATTGCCTTCATATCAAATTTACCTTTCATTCTCCATCTCGTGAGATGCTCAAGATAGGAGGTTGTGGATGGCGTGTGATGTGTAAAGAAGACTTGGAAGAGTGGAGACACAATAATTATTGGAACAAATCAAGTACTCAAGAAGAGATTGATGATTCTGAGGTCCGCCTTCCTCACACTGCTTTGGACAGAACAATAAAAATTTTTCAATAA | 3279 | 0.3788 | MAYRVKGESFSTSSNSTPKWKHDVFLSFAGKDTRLNFTDHLYSAFSQRGIRAFKDDKGIERGEVISQQLFQAIEDSLVAVVVFSQNYANAAWCLDELQKIIDCRNKLGQQVFPIFYGVDPSDVRHLRKSFALALAKHEERFKGSKDKLQKWKNALLEISNLSGWDTSGRPETQVIQDVVEAIWNKLCSKLPSYDDYNLVGMVSRIVEINSLLKIGLGEVLFVGIWGMGGIGKTTLARVVYENISDQFEICCFLADIRETSERKGKVYLQRELLSHVSNIKIKNEFEGKKEIRKYFWNKMVLLVLDDINHVSQLGNLAAIPEWFGEGSRVIITTRDKHLLTSHGVHGIYEIEPMKEDESLKIFSKEAFKKDHPEEGYVELSKSVVEYAGGLPLALQVLGSFLHGRSVLEWEDALDRLKQISDKDVFQILKISYDGLNDEEKALFLDIACFFKGWEKDEVIQILKNTGLHSSIGISILIEKALLVEHHTDFGTCRLEMHDLFQEMGRNIVYQESPSIACRRSRLWKIEDIDEVLENTIGTEAIQSIVLDSSQRDDPEVYWEPHAFSKLFNLRLLVIRRRLELPNGLKCLSSALRVIQWQFCPLEALPLGTPLNKLVDIEMQQSNIKQLWYGVQLVSVNLCGCTSLKVIPRKLETNSLEKLLLRRCSEVSMLPEFGEGMKTLSLLDVSYTAVRGLPQSFGFLTGLRDLKMRNCEHLVLRLSVFHHLKNLKTVDMCGCLKLSKGPKRLNEIVASEKHDMSENFRTDMTLFSAIVSNQVFSFNPSAITELDLSACGLSDGSIVEHFSGLSSLLVLNLGGNDFVILPDGWICSSIRLRFLFLSACRRLKSLPKLPPQLIRLDAVGCNSMEPLSERQLWNMVSSLHHEYRHQVKYENTLLKHIEVAEYFPQRDFFAIIRGSEIPSWFPNNDYVASDLYRSKCELVMNIPQHVRASEWSGLAVCIKLQIMPCVFDSFHISWSSKAPEDDHYVRKKWAHEIRVVEKEGPHICIMVLHLNEKTCWQHLRGHDNCLHIKFTFHSPSREMLKIGGCGWRVMCKEDLEEWRHNNYWNKSSTQEEIDDSEVRLPHTALDRTIKIFQ | 1092 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g3303 | 1092 | ProSiteProfiles | TIR domain profile. | 20 | 190 | IPR000157 | GO:0007165 | |
Prci2g3303 | 1092 | PRINTS | Disease resistance protein signature | 721 | 737 | - | - | |
Prci2g3303 | 1092 | PRINTS | Disease resistance protein signature | 387 | 401 | - | - | |
Prci2g3303 | 1092 | PRINTS | Disease resistance protein signature | 221 | 236 | - | - | |
Prci2g3303 | 1092 | PRINTS | Disease resistance protein signature | 294 | 308 | - | - | |
Prci2g3303 | 1092 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 22 | 860 | IPR044974 | GO:0006952 | |
Prci2g3303 | 1092 | SUPERFAMILY | L domain-like | 553 | 874 | - | - | |
Prci2g3303 | 1092 | Pfam | TIR domain | 21 | 200 | IPR000157 | GO:0007165 | |
Prci2g3303 | 1092 | Gene3D | - | 188 | 345 | IPR027417 | - | |
Prci2g3303 | 1092 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 182 | 446 | IPR027417 | - | |
Prci2g3303 | 1092 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 11 | 164 | IPR035897 | - | |
Prci2g3303 | 1092 | Gene3D | Ribonuclease Inhibitor | 541 | 769 | IPR032675 | - | |
Prci2g3303 | 1092 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 18 | 188 | - | - | |
Prci2g3303 | 1092 | SUPERFAMILY | "Winged helix" DNA-binding domain | 423 | 533 | IPR036390 | - | |
Prci2g3303 | 1092 | Gene3D | Ribonuclease Inhibitor | 770 | 902 | IPR032675 | - | |
Prci2g3303 | 1092 | Gene3D | - | 16 | 187 | IPR035897 | - | |
Prci2g3303 | 1092 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 354 | 436 | - | - | |
Prci2g3303 | 1092 | SMART | till_3 | 21 | 161 | IPR000157 | GO:0007165 | |
Prci2g3303 | 1092 | Coils | Coil | 134 | 154 | - | - | |
Prci2g3303 | 1092 | Gene3D | - | 353 | 436 | IPR042197 | - | |
Prci2g3303 | 1092 | Pfam | NB-ARC domain | 209 | 433 | IPR002182 | GO:0043531 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g3303 | Prci-Chr2 | 41831097 | 41837784 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g3303 | 5 | 771 | WRKY Transcription Factor Family | AT4G12020 | 27.791 | 6.06e-82 | 292 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g3303 | - | - | pcin:129301954 | 2193.7 |