Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3301 ATGGTCAATCTAATGTCACAGTTAGAGATTTGCGTGGATGACATTCGCTTTTTAGGGATATGGGGTATGGGCGGTGTTGGCAAAACAACTCTTGCTAGAGTTGTTTATGAAAACATCTTTGAAAGATTTGAAATGCATTGTTTTCTTGCCAATGTTAGAGAAACTTTGCAAACAAACGGCCTAGTCTCTTTGCAGCAAAGGCTTCTTTCTCATCTTGGAATAAACAATAAAATTCATGATGATTATGAAGGAATGAAGATGATAAGAAAGCTTTTCTACTGTAAAAAGGTTCTTCTTGTCCTTGACGATTTAGATGCTACGAGTCAATTAGAGAAGTTGGCTGAAAGTCCACATTGGTTTGGTAAAGGTAGTAGAATAATTATCACAACAAGAAAGAGTCACGTCCTTACCTCAATTGGAGGGAAACTATATGAGATGAAAGCCATGGACAAAGATGAATCTCTTCAACTCTTTTCTAAGAAAGCATTCAAGAAAGATCATGCTGAAAAAGATTATTTAGAGTTGTCTGAATCTGTGGTTGCATATGCAAGAGGTCTTCCTTTGGCACTTAAAGTTTTGGGTTCTTTTCTTTGCAAAAGAATTAAAGATGAGTGGACCGATACTTTAGATAAACTAAAGAAAAATCCAAATAAAGATATTCTACAAATACTTAAAATAAGTTATGATGGATTAGATGAGAATGAAAAGACAATATTTTTGGATATTGCTTGCTTTTTCAGGGGATGGAGAAAAGATAAAGTGACCCAAGTTTTGGAAGATTGTGATCTAAACCCAACAATTGGAATAAAGGTCTTGATTGAAAAAGCTTTAGTTGAAACGAAAGATCCTTTTTGTGAAAAATATCCCACTTTAGAAATGCATGATTTGCTTGAAGATTTGGGTAGGGATATTATTATTCGAGAATCTCCCAATCCTGGCAACCGTAGCAGGTTGTGGGAGTTTGAGGACATTAAGGAAGTGTTGGAAAATAATAAGGCATCTGAAGCAATACAAGCTATTGTTATGCGAGGGCATTATTCTTGGAACTCAAAAAAAATAAAAGTGCACCCCAATGCCTTTTTAAAGATGAGTTATATTAGATTACTCATAATACAGAACTATGATGATCAACTCATCTTACCAAAGAGATTGGAACTTTCGAGCGCATTGAAAGTTGTTTGCTGGCAACAATTCTCTCTTGAAACTCTCCCACTTTCCTTGGATAAAATTGTAGATATTGAAATGCAATATAGCAAAGTAAAGCAATTTTGGAATGCTACACAGTCAATGGAAAAGTTGAAACATATTGATCTAAGATATTCTCTCAATTTGATCGAAACTCCGGACTTCTTAAGTGTTCCAAATCTAGAACATTTATGTCTTATTGGCTGCAAATCCCTTGTCAAGGTTCATACCTCACTTGGAAAGTTGAAAAGACTTGTCAAGGTTGACTTCAGTGAATGTATCATTCTTGAAATCCTACCAAGAAAATTAGAAACGAATTCTTTGGAAAGTTTAGTTCTACGTGGGTGTGGAAATATTGTGGTGCTTCCAAAGTTTGGGGAAGACATGAAGAAACTATCATATCTTGATGTGAGTGGCACTGCTATAATTACATTTCCGGAATCACTTGGTTCCTTGACTGGTCTTGAATATTTGAATTTGAGTGGCTACAAGTTGTTGAAGACTCCCATGAATTGCCAAATTTTTGGCTTGAATCTTAGGTTGTTAATAGAGTTATATTTACACAGTTGTGGCTTAAATGATGGATCAATTCCTAATAATATTAGTGGTTTATCATCACTCATTGTATTGGATCTTAGAGCAAATGATTTTGTTAATCTGCCCACGGGTTGCTTCTCTAGTCTATTTCGACTTCTCTATCTTTTTTTGGATTATTGTGTAAGACTCAAGTCATTGCCAAGGCTTCCAGCACAGTTGATTTGGTTAAGTGCAGTCGATTGTGATTCAATGGAACCTTTATCAGATAGACAATTATGGTATTTGGTTACTTCACATGACCATGAGGGACATGCTCCCATTAAGGGTATAATCAATGTGAATAACAGTTTAGTATTGGTGCAGCCGGAATGTTTGCCCCAAAGAGATTTTGTTGCAATTATGCCAGCTAGATGCCAAATACCATCGTGGTGTACAAATAAAGAATATTATCCTTTTGCCAAGAAAAGAAAGGAATGTGAGATAATAGTGGACATACCTCAACATTTCTATGAAAGAAAGTGGATTGGAATTGTTGTATGCCTCCAGCAGCATCATCAACATGAGAATAATATTGGGATGTGGGTGGAGAGTGATATGCAAGGAAGAGATGCAAGAGTGTTGCCATCTCAATCATTTCACCCAACTACCACTGCTTGCTCCTCTTCATCAGCTCATGCTTTCACGTACTCTCCTTGA 2418 0.361 MVNLMSQLEICVDDIRFLGIWGMGGVGKTTLARVVYENIFERFEMHCFLANVRETLQTNGLVSLQQRLLSHLGINNKIHDDYEGMKMIRKLFYCKKVLLVLDDLDATSQLEKLAESPHWFGKGSRIIITTRKSHVLTSIGGKLYEMKAMDKDESLQLFSKKAFKKDHAEKDYLELSESVVAYARGLPLALKVLGSFLCKRIKDEWTDTLDKLKKNPNKDILQILKISYDGLDENEKTIFLDIACFFRGWRKDKVTQVLEDCDLNPTIGIKVLIEKALVETKDPFCEKYPTLEMHDLLEDLGRDIIIRESPNPGNRSRLWEFEDIKEVLENNKASEAIQAIVMRGHYSWNSKKIKVHPNAFLKMSYIRLLIIQNYDDQLILPKRLELSSALKVVCWQQFSLETLPLSLDKIVDIEMQYSKVKQFWNATQSMEKLKHIDLRYSLNLIETPDFLSVPNLEHLCLIGCKSLVKVHTSLGKLKRLVKVDFSECIILEILPRKLETNSLESLVLRGCGNIVVLPKFGEDMKKLSYLDVSGTAIITFPESLGSLTGLEYLNLSGYKLLKTPMNCQIFGLNLRLLIELYLHSCGLNDGSIPNNISGLSSLIVLDLRANDFVNLPTGCFSSLFRLLYLFLDYCVRLKSLPRLPAQLIWLSAVDCDSMEPLSDRQLWYLVTSHDHEGHAPIKGIINVNNSLVLVQPECLPQRDFVAIMPARCQIPSWCTNKEYYPFAKKRKECEIIVDIPQHFYERKWIGIVVCLQQHHQHENNIGMWVESDMQGRDARVLPSQSFHPTTTACSSSSAHAFTYSP 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3301 805 PRINTS Disease resistance protein signature 183 197 - -
Prci2g3301 805 PRINTS Disease resistance protein signature 428 444 - -
Prci2g3301 805 PRINTS Disease resistance protein signature 17 32 - -
Prci2g3301 805 PRINTS Disease resistance protein signature 91 105 - -
Prci2g3301 805 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 578 IPR044974 GO:0006952
Prci2g3301 805 FunFam Disease resistance protein (TIR-NBS-LRR class) 150 232 - -
Prci2g3301 805 SUPERFAMILY L domain-like 360 658 - -
Prci2g3301 805 Pfam NB-ARC domain 13 229 IPR002182 GO:0043531
Prci2g3301 805 SUPERFAMILY "Winged helix" DNA-binding domain 219 329 IPR036390 -
Prci2g3301 805 Gene3D - 1 148 IPR027417 -
Prci2g3301 805 Gene3D - 149 232 IPR042197 -
Prci2g3301 805 Gene3D Ribonuclease Inhibitor 325 674 IPR032675 -
Prci2g3301 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 242 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3301 Prci-Chr2 41769327 41798159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3301 14 661 WRKY Transcription Factor Family AT5G45050 32.396 2.91e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3301 - - pcin:129302763 1614.74