Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g3298 | ATGGCGAACACTACCCTGGGAGAATCTTCCTCAACCTCTGGTGCCCCTAATTCAACTCCGATTGGGAAATATGACGTTTTTCTGAGTTTCAGAGGAGAAGATACTCGCTTGAAGTTTACAGATCACTTGTATCATGCTCTCACTAGAAGTGGGCTCAAAGCTTTTAGAGATGATGAAAAACTTCAAAAAGGAGAAGTTTTATCACCACAGCTCATTCAAGCAATTAAGGATTCTCTCTGTGCAGTTGTGGTTCTCTCTCAAAATTATGCAGATTCCAAATGGTGTTTGATTGAACTTCAACAAATTCTTGAAACCATGAACAACATGGGTCGACGGGTTTTTCCAATCTTCTATGATGTAGATCCATCTGATGTGAGAAATCAAAGAAAAAGATTCGGAGAAGCTCTAGCCAATCATGAAGAGAGACTTAGAGGAGAAGGGGACACAACGACAGTGCAGATTTGGAAAAACTCTTTGTCTGAAATTGGAAACATGTCTGGTTGGGACACCAGAAATCGGCCTGAAGTACGACTTATTGAAGAAATGGTTGGAGAAGTATGGAAATATCTATGGTCCAAGTTACCATCTTATGATGATAACCTGGTTGGAACAGAGCGAAGAATGGTTGATCTAATGTCATGCTTGGAGATTGAGTTGGATGACATTCACTCTGTAGGAATATGGGGTATGGGCGGCTCTGGCAAAACGACTCTTGCAAAAGTTGTTTATGAAAAAATCTCAGAGAGATTTGAAATGTGTTCATTTCTTGCCAATGTTAGAGAAACTTTGCAAACAAAAGGCCTAGTCTCTTTGCAGAAAAGTCTTCTTTCTCAAATTGGAATCAAGGAGAAAATTTATGATGAATATGAAGGAATGAAGATGATAAAAAAGCTTTTCCGCAATAAAAAAGTTCTTCTTGTCCTTGATGATTTAGATGACGAGAATCCATTAGAGAAGTTGGCTGGAGGTCTAGATTGGTTTGGTAAAGGGAGCAGAATAATTATCACAACAAGAAATAGTCATGTGGTCACCTCATTCGAAGGGAAATTATATGAGATGAAAGCCATGAAGGAAGATGAGGCTCTTCAACTCTTTTCAAAGAAAGCATTCAAGAAAGATCATCCCAAAGGGGATTATCTAGAGTTGTCTAAAGCTGTGGTTGCATATGCAGGAGGTCTTCCTTTGGCACTTGAAGTTTTGGGTTCTTTTCTTTACAAAAGAAGTATAGATGGGTGGATTGATACTTTGAATAAATTGAAGCAAAATCCAAATACAAATATTTTTAAAACACTTAAAATAAGCTTTGATGGATTAGATGAGAAAGAAAAGACAATATTTTTGGATATTGCTTGTTTTTTCCGGGGTTGGAGGAAAGATAAAGTGACCCTACTTTTGGATGGTTGTGATCTAAACCCAATAATAGGAATAGAAGTCTTGATTGAAAAAACTTTACTAGTTGAAAGGAAATATTATTCAGAAGATCTCTATTTAGATATGCATGATTTACTTGAAGAGTTGGCTAAGGATATCATTCGTCAAGAATCTCCCAATCCTGGCAGCCGTAGCAGGTTGTGGGAGTTTGAGGACTTTAAGGAAGTATTGGAAAATAACAACGGATCTAAAGCAATAGAAGCTGTTTGTATGCGACATATTTTGCTGGACCCTGGGAACGAGCATAAAATAGAAGTACACCCTAAAGCCTTTTCAAAGATGAATAATATTAGATTGCTCATAATAGACGGCCTTTTTCATGAGCTCATCTTGCCAAGGGAATTGGAACTTCCTAGTGCATTGAAAGTTGTTTGCTGGCCACAATTTTCTCTTGAAGCTCTCCCCTTTCCCTTCATAAAGCAACTTTGGAATGGCAGGCAGGCTCAAGTCATTGCCATGGCTTCCACCACGGTTGATTCGATTAAGTGCAGTTGGTTGTGA | 1932 | 0.3835 | MANTTLGESSSTSGAPNSTPIGKYDVFLSFRGEDTRLKFTDHLYHALTRSGLKAFRDDEKLQKGEVLSPQLIQAIKDSLCAVVVLSQNYADSKWCLIELQQILETMNNMGRRVFPIFYDVDPSDVRNQRKRFGEALANHEERLRGEGDTTTVQIWKNSLSEIGNMSGWDTRNRPEVRLIEEMVGEVWKYLWSKLPSYDDNLVGTERRMVDLMSCLEIELDDIHSVGIWGMGGSGKTTLAKVVYEKISERFEMCSFLANVRETLQTKGLVSLQKSLLSQIGIKEKIYDEYEGMKMIKKLFRNKKVLLVLDDLDDENPLEKLAGGLDWFGKGSRIIITTRNSHVVTSFEGKLYEMKAMKEDEALQLFSKKAFKKDHPKGDYLELSKAVVAYAGGLPLALEVLGSFLYKRSIDGWIDTLNKLKQNPNTNIFKTLKISFDGLDEKEKTIFLDIACFFRGWRKDKVTLLLDGCDLNPIIGIEVLIEKTLLVERKYYSEDLYLDMHDLLEELAKDIIRQESPNPGSRSRLWEFEDFKEVLENNNGSKAIEAVCMRHILLDPGNEHKIEVHPKAFSKMNNIRLLIIDGLFHELILPRELELPSALKVVCWPQFSLEALPFPFIKQLWNGRQAQVIAMASTTVDSIKCSWL | 643 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g3298 | 643 | Pfam | TIR domain | 23 | 196 | IPR000157 | GO:0007165 | |
Prci2g3298 | 643 | Pfam | NB-ARC domain | 220 | 425 | IPR002182 | GO:0043531 | |
Prci2g3298 | 643 | PRINTS | Disease resistance protein signature | 390 | 404 | - | - | |
Prci2g3298 | 643 | PRINTS | Disease resistance protein signature | 298 | 312 | - | - | |
Prci2g3298 | 643 | PRINTS | Disease resistance protein signature | 224 | 239 | - | - | |
Prci2g3298 | 643 | ProSiteProfiles | TIR domain profile. | 22 | 194 | IPR000157 | GO:0007165 | |
Prci2g3298 | 643 | SMART | till_3 | 23 | 165 | IPR000157 | GO:0007165 | |
Prci2g3298 | 643 | Gene3D | - | 21 | 190 | IPR035897 | - | |
Prci2g3298 | 643 | Gene3D | - | 191 | 355 | IPR027417 | - | |
Prci2g3298 | 643 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 21 | 192 | - | - | |
Prci2g3298 | 643 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 357 | 439 | - | - | |
Prci2g3298 | 643 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 24 | 615 | IPR044974 | GO:0006952 | |
Prci2g3298 | 643 | SUPERFAMILY | "Winged helix" DNA-binding domain | 426 | 535 | IPR036390 | - | |
Prci2g3298 | 643 | Gene3D | - | 356 | 439 | IPR042197 | - | |
Prci2g3298 | 643 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 190 | 449 | IPR027417 | - | |
Prci2g3298 | 643 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 23 | 168 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g3298 | Prci-Chr2 | 41581235 | 41587960 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g3298 | 24 | 633 | WRKY Transcription Factor Family | AT4G12020 | 29.827 | 6.40e-74 | 257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g3298 | - | - | pcin:129303275 | 845.114 |