Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3291 ATGGCCGTCACCTTATCAGGTCTCCATACAGAATCAGGACTCAAGTCCCTTAATGAATTCCTCTCTGGCAAGACCTACATTTCTGGCGATCAGTTGACCAAGGATGACATTAAGGTCTACGCCTTTGTTTCGAAGAACCCAAGCGATGCTTTTCCCAATGCCAGCAAGTGGTACGATGCCGTCTCTTCACGTCTTGCTGAAAGCTTCCCTGGAAAAGCTCAAGGGGTGAAATTCAGCGGCCAAGCTGCTCCAGCTGAAGCTAGTCCTGCCAAGGCGGCTGCTCCTGCTGATGATGGCGATGACCTTGATCTGTTTGGTGACGAGACAGAGGAGGAAAAGGCAGCAGCAGAGGCAAGAGAGGCTACTAAAAAGGAATCCTCCAAGAAGAAAGAGAGCGGGAAGTCCTCTGTTTTGCTTGATGTGAAGCCTTGGGACGACGAGACAGATATGAAGAAGCTGGAAGAGGCTGTTCGTTCGATTGAGATGCCTGGGCTTCTGTGGGGAGCATCCAAACTGGTGCCGGTTGGTTACGGTATTAAGAAGATGCAGATCATGATGACCATTGTTGACGACCTTGTCTCTGTGGATTCCCTTATTGAGGAACATCTCACAGTTGAGCCATGCAGTGAGTATGTTCAAAGTTGTGACATTGTTGCGTTCAACAAAATCTAA 672 0.4881 MAVTLSGLHTESGLKSLNEFLSGKTYISGDQLTKDDIKVYAFVSKNPSDAFPNASKWYDAVSSRLAESFPGKAQGVKFSGQAAPAEASPAKAAAPADDGDDLDLFGDETEEEKAAAEAREATKKESSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGIKKMQIMMTIVDDLVSVDSLIEEHLTVEPCSEYVQSCDIVAFNKI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3291 223 SMART EF1_GNE_2 134 223 IPR014038 GO:0003746|GO:0006414
Prci2g3291 223 MobiDBLite consensus disorder prediction 80 135 - -
Prci2g3291 223 MobiDBLite consensus disorder prediction 109 135 - -
Prci2g3291 223 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 212 223 IPR001326 GO:0003746|GO:0005853|GO:0006414
Prci2g3291 223 Gene3D - 3 74 - -
Prci2g3291 223 Gene3D - 127 223 IPR014717 -
Prci2g3291 223 CDD EF1B 137 223 IPR014038 GO:0003746|GO:0006414
Prci2g3291 223 Pfam EF-1 guanine nucleotide exchange domain 136 223 IPR014038 GO:0003746|GO:0006414
Prci2g3291 223 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 9 223 - -
Prci2g3291 223 SUPERFAMILY eEF-1beta-like 131 223 IPR036219 -
Prci2g3291 223 FunFam Elongation factor 1-beta 1 like 128 223 - -
Prci2g3291 223 SUPERFAMILY GST C-terminal domain-like 10 66 IPR036282 -
Prci2g3291 223 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 98 106 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3291 Prci-Chr2 41570122 41572267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3291 1 223 Eukaryotic Initiation Factors Gene Family AT5G12110 72.807 3.37e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3291 K03232 - cit:102619566 302.753