Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3290 ATGCGAGCTGCGAGGAGGATGGAAGAATACCAAAATAATGAGGAGCTTCTTGAGATTTCTAAACTGTATGAATCACAGAAGGTTGAATTCAGGATAGAGTTGGTCACGGCAACTTCAGCTAAGGAGGTTGCTTTAGACAAAGCGAAAGAACTAAATGCAACTTGGGTGATATTGGACAGGCAGATGAAGAAAGATGAGAAGTTTTTCCTGCAGGAGCTTTCTTGTGGTATATCAAGATTGAAGCGTAACAATAGGATTGAACATTTGAGAGGTCCCCCAGTTCTCCCCACAGAGATATTTATCAGTCCTGTACCAGGATGTCATGACGATGAGGATAACAGTATGGAAGACCCCAAGATTGGTCAAATAAAAGAGGATCTTCCCAGCATGGAAGAAGAGATGCAAAGAAACTCAGATAAGGGGGATGACTTTACATTTACTGACAGTAATCAAACAAGTCAGACAAAACCTGATGAACCCAGAACAGTTGTAGAAGAGACATGGAAGAGCATCCATGATGAAGGGCAGCACTTCAGGCAGGCAACAAGAGGTGATCTACACATAGATGGAACAAAAGCTGAGCTGCTGAGCCATGATCAAGAAGATAAAACAGATGGAAAGCAAGAGAAGAGCATTTTTGGGAATACAGAATGCTCTATCTGCTCAGTCTGCAAAAGTAGACGGCCAGATAGTGGATGGAAAAGGGACTTCTCATATATCGAACTTCAAGTCGCTACAGATGAATTTTCAATTAACAACTCACTTTCTGAAGGAGAATGTGGATCTACTTTCAAAGGTCAGCTTGATTGTCAGCTGAAAATAGTGGTGAAGCAGCATCGACTCACAGATGCCCAAGTAGAGAAACAAATGATGTCTCAAGTGCAATTGATCCTCAAGGCTAGACATAAGAATGTGGCCATGCTGTTGGGTTCCTCCATAGAAGAAAGTCAGCTATTAGCTGTATATGAGTATGCATGCAATGGTTCACTTGACAAGCATCTATCTAAGAATAGTTGCAGGCCATTAAGCTGGGGAAAAAGGGTGAAAATAGCTGTAGGTGTCTCCATGGGTCTAAAGTACTTACATGATAATAACATAATTCATGGACGTATAAAGCCAAGCAACATTCTTCTAAACCATGAGTTCGAACCAATGCTTGGAGATTTCAGCTTGGGGAGAGCAAAATGTGAAGCAAAAAAGTCACACAAGGATAAAAGTTTGGTATACGCAGCACCAGAGTGTTTGGAGAATTGGAAACTAACAGCCAAGACGGATGTATACTCCTTTGGAATGGTTCTTTTAGAGCTTATCACTGGTCAGAGGGCTACAGACAAAATATCAGGAGAGAAAAACCTTGTTGAATGGGCAAAGCCTCTTCTTGGAACAAAGAAGTATCCGCAATTGGTGGATCCTGCAATTGGAACCTCCTACGAAGAAGAACAACTTCATTGGTTGGCCCAAGTAACAGAAAAATGTCTCAAAAAGAATCCAAAGGAAAGATTAAGCATGAATATGGTGGTCTCTGAATTACGAGGCATAATAGAGAGTGAAGAGGGCTGTGTTACTGTAGACTTTTCCCCAGAAATTTCAAGATCAACATGTGGCATATCAGACATTACTTCTACTCAAGGTCAAAAGATACCTGATGAGCTGACTGAGGAAAAGCGGATCAAGAGCTGCCACTATGGAGAAATGTGGAATCCAGAGCTAGCAATTGAAAATAACGACATGTTATGTCATAAAAAAGCTGATCATCTAAGCCATGGGGTGGAGAAGAGTGTAGGAAAGGAGAAAAGAACAAACCATATGGTAGCTTTGACAAAAGTTGATACACTGGATCTGGATCAAGGACAGAGCAGTTTTATAAAAAATGAGACAATTATGGGTCAAATTGCAGTTGATAGAAAAGGAGATATGATGAATAGGCACCAGGGAGAAGTGATTTTGGATAGTTCAAAATCATTTTTATGCTCTATATGCAAAAGTAGACGCTCAAATGTTGGAAATCAAAGAGACTTCACTTACAATGAGCTTGAAGATGCTACAGATATATTTTCATTTCAGAACTCTCTCTCTGAAGGTGGAAATGGACCAATTTTCCGGGGCATTCTAGATTGTAAGCTGAAAATAGCTATCAAGATGCATCGAATAACTAGCTCTCGGGAAGAAGAAATATTTAAGTCAGAGGCGCAGTTGCTTACTAAAGCTATACATAAAAATGTGGTGATGCTGTTGGGTTCATGCACAGACAAAAATCAACAGATTCTTGTGTATGAGTTTGCTTGCAATGGTTCACTTGACCAGCACTTATCAGGGGGAAGCTGCCGGTCATTGACTTGGAGAGAAAGGGTAAAAGTAGCAATTGGTGCCTCTAGAGGTCTGAAATACCTTCATGACATTAACATAATTCATGGAAGTATAAAACCAAGCAACATTCTTCTGACCCATGAATTCGAGCCTCTGCTTGGAGATTTTGGCTTAGGAAAAGGAAAACTAGAACTGAAATCCCACAAAGATAAAAATGTAAGTTCTGAATACACAGCACCGGAGTATTTGGAGAAAGGAAAACTGTCCACTAAGACGGATGTATACTCCTTTGGCGTGGTTCTTTTAGAATTGATCAGTGGCAGGAGAGCGACAGATAAATTATCTGGAGGGAAAAGTTTTGTTCAGTGGGCTAAGCCTCTTCTTGGTGGGAAGAAATACGCCCAGCTGGTGGATACTAAAATCAGCAGTTCTTGCAAAGAAGACCAACTTAGATGGTTGATCCAAGTAATAGAACAATGTCTCAGGAAGAATCCTAAGAAAAGATCAAGCATGAATATGGTTGTCTCTGCATTGCAAGACATTGAAGATACTGATGGTTTATGTGCAATTGAAGACTCTTCTCCAGAAAAATCATATATACCACCCTGTGCGCCTGATATGATTTGTTCACAAGGTCAAACAAAGGTTGATCAGAACAGTTGGAAACAAGAACAGATCGAAAGCATCCCTTATGAGATGGAGAGGAGCTTAAGATCAATAGTCAGAAAAAATGACTTAATAGGTAGTAGAAATGTTCATCAGCTGCGCCAGGATGGAGAAGAGATCAGCAATGTTCACATGATGTGTCGCACAAAAACTGATCAGATAAGCCAGGCTCAAGAAGGTACAGGAGGAAGCCTCCAAATAGAAAAGAGGGGCACAATACTCACAAATATGGGTAGCCAAATTGCAAGTGAAAATTGCAATGAAGAACTAATGCAGGGTAGCTTACGTGGGGATTCATTGGATGGTTGTAACATCAGAGTTATGTTAGAGGATTCCGAATCTTCTGTATGCTCTATCTGCAAAAGTAAACGCCCTCATTTTGGAGGTCATAAGGATTTCTCTTATAATGAGCTCCATGTGGCTACTGAGGGGTTTTCAATTAAGAACTCTCTAACTGAAGGTGTATATGGACCTTCGTTCAGAGGCCAGCTAAACTGCAAATTGAAAATAGTTGTCAAGCAACTTCAAATGACAAGCTCCCAGGAAGAGAAGATATTTAAGTCAGAAGTTCAGTTCCTCTCTAAGGCTAGACATGAAAATGTGGTCATGTTGTTGGGTTCATGCATAGATAAAACTAAAATGCTGATTGTATATGAGAATGCATGCAATGGTTCACTTGAGCATCATTTATCAGGACAAACTGGTAGATTACTAACATGGAGAGAGAGGGTGAAAATTGCAATAGGTTTATCCAGAGGTCTAAAGTATCTGCATGAGAATAATACAATTCATGGAAGTATAAAACCAAGTAACATTCTTATAACTCATGAATTTGAAGCACGGGTAGGAGATTTTGGATTTGGAAAATCCAAAAATGAATTGAAGAATTGGCACAAGAATAAAAATGTAGAGAATATTGGATACGAGGCTCCGGAACTTTTGGACAGTGGAAAGTTCTCAACTCAGACAGATGTGTATTCTTTAGGGGTGGTTCTTTTAGAGCTGATCACTGGGCATAGGGTTATAGATAAAGTTTCAGTACAGAAAAGTCTTATTGAATGGGCAAAACCACTTCTTAGAGGAATGAATTACCCACAATTGGTGGATCCAAAACTCAGCAGCTCCTACGATGATCAAGAACTTTTTTCGTTGGTCCAAGTAATTGAGAAGTGTCTAAGAAAGAATCCAAAGGAAAGGTTAACAATGAATATGGTTATCTCAGCATTGCCATGCATAGTTGATAACAAGCCACTTGTAACTGAGGACCCCATTACAGTAAAGCCACACTTCAAACGCCCTTTGAAAGATGAATCGATCTCACAAGATATCAAAGTATCACCACAAGCAGATAATTTAGAGGTTATCAAAGTAACTGAGGACCCCATTATAGAAAAGCCACAATCCAATCGCCTTTTGCTAGATGAATCTAGTTCACAAGACATCGAAGTATCGCCACAAGCAGCTAACTTGGAGGTTATTCCAGTAATTAAGGACCCCGGTAAAGAAAAGCCACGCTCTGGACTCACTGTGCAAGATGAATCTAGCGGCCAAGAACTCAAAGGATCGCAAGAAAATAACCTAAGTGATGTTAGTCAGGAAAGACAGAAAAATGAAACTTGTAGCAGAGATAATAAGGTCACAAATGTTTATCCAGAGAGCACAGAACACATGGCTTGTGGTGGAAGCAATGGAGAGCCACAAGAAACAGGAAGACTAGGCCACAAGATACATCAGGTAAATCAGAGGCGCATATCATATGGTGGTGCCAAAATATTTTTTCTTGACGGTGCCAAAGAATACATAGTAGATGAACAATTTTTTAGGTTTGGTAATTTGCTTTGA 4815 0.4 MRAARRMEEYQNNEELLEISKLYESQKVEFRIELVTATSAKEVALDKAKELNATWVILDRQMKKDEKFFLQELSCGISRLKRNNRIEHLRGPPVLPTEIFISPVPGCHDDEDNSMEDPKIGQIKEDLPSMEEEMQRNSDKGDDFTFTDSNQTSQTKPDEPRTVVEETWKSIHDEGQHFRQATRGDLHIDGTKAELLSHDQEDKTDGKQEKSIFGNTECSICSVCKSRRPDSGWKRDFSYIELQVATDEFSINNSLSEGECGSTFKGQLDCQLKIVVKQHRLTDAQVEKQMMSQVQLILKARHKNVAMLLGSSIEESQLLAVYEYACNGSLDKHLSKNSCRPLSWGKRVKIAVGVSMGLKYLHDNNIIHGRIKPSNILLNHEFEPMLGDFSLGRAKCEAKKSHKDKSLVYAAPECLENWKLTAKTDVYSFGMVLLELITGQRATDKISGEKNLVEWAKPLLGTKKYPQLVDPAIGTSYEEEQLHWLAQVTEKCLKKNPKERLSMNMVVSELRGIIESEEGCVTVDFSPEISRSTCGISDITSTQGQKIPDELTEEKRIKSCHYGEMWNPELAIENNDMLCHKKADHLSHGVEKSVGKEKRTNHMVALTKVDTLDLDQGQSSFIKNETIMGQIAVDRKGDMMNRHQGEVILDSSKSFLCSICKSRRSNVGNQRDFTYNELEDATDIFSFQNSLSEGGNGPIFRGILDCKLKIAIKMHRITSSREEEIFKSEAQLLTKAIHKNVVMLLGSCTDKNQQILVYEFACNGSLDQHLSGGSCRSLTWRERVKVAIGASRGLKYLHDINIIHGSIKPSNILLTHEFEPLLGDFGLGKGKLELKSHKDKNVSSEYTAPEYLEKGKLSTKTDVYSFGVVLLELISGRRATDKLSGGKSFVQWAKPLLGGKKYAQLVDTKISSSCKEDQLRWLIQVIEQCLRKNPKKRSSMNMVVSALQDIEDTDGLCAIEDSSPEKSYIPPCAPDMICSQGQTKVDQNSWKQEQIESIPYEMERSLRSIVRKNDLIGSRNVHQLRQDGEEISNVHMMCRTKTDQISQAQEGTGGSLQIEKRGTILTNMGSQIASENCNEELMQGSLRGDSLDGCNIRVMLEDSESSVCSICKSKRPHFGGHKDFSYNELHVATEGFSIKNSLTEGVYGPSFRGQLNCKLKIVVKQLQMTSSQEEKIFKSEVQFLSKARHENVVMLLGSCIDKTKMLIVYENACNGSLEHHLSGQTGRLLTWRERVKIAIGLSRGLKYLHENNTIHGSIKPSNILITHEFEARVGDFGFGKSKNELKNWHKNKNVENIGYEAPELLDSGKFSTQTDVYSLGVVLLELITGHRVIDKVSVQKSLIEWAKPLLRGMNYPQLVDPKLSSSYDDQELFSLVQVIEKCLRKNPKERLTMNMVISALPCIVDNKPLVTEDPITVKPHFKRPLKDESISQDIKVSPQADNLEVIKVTEDPIIEKPQSNRLLLDESSSQDIEVSPQAANLEVIPVIKDPGKEKPRSGLTVQDESSGQELKGSQENNLSDVSQERQKNETCSRDNKVTNVYPESTEHMACGGSNGEPQETGRLGHKIHQVNQRRISYGGAKIFFLDGAKEYIVDEQFFRFGNLL 1604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3290 1604 Gene3D Transferase(Phosphotransferase) domain 1 762 963 - -
Prci2g3290 1604 Gene3D Transferase(Phosphotransferase) domain 1 326 525 - -
Prci2g3290 1604 Gene3D Transferase(Phosphotransferase) domain 1 1213 1413 - -
Prci2g3290 1604 ProSiteProfiles Protein kinase domain profile. 249 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3290 1604 FunFam Lectin-domain containing receptor kinase A4.3 1212 1418 - -
Prci2g3290 1604 MobiDBLite consensus disorder prediction 129 143 - -
Prci2g3290 1604 Gene3D Phosphorylase Kinase; domain 1 657 760 - -
Prci2g3290 1604 Gene3D Phosphorylase Kinase; domain 1 1108 1211 - -
Prci2g3290 1604 Gene3D Phosphorylase Kinase; domain 1 222 324 - -
Prci2g3290 1604 FunFam Proline-rich receptor-like protein kinase PERK8 1098 1211 - -
Prci2g3290 1604 MobiDBLite consensus disorder prediction 144 158 - -
Prci2g3290 1604 Pfam Protein tyrosine and serine/threonine kinase 686 947 IPR001245 GO:0004672|GO:0006468
Prci2g3290 1604 Pfam Protein tyrosine and serine/threonine kinase 1138 1399 IPR001245 GO:0004672|GO:0006468
Prci2g3290 1604 Pfam Protein tyrosine and serine/threonine kinase 251 510 IPR001245 GO:0004672|GO:0006468
Prci2g3290 1604 SUPERFAMILY Protein kinase-like (PK-like) 1120 1399 IPR011009 -
Prci2g3290 1604 PANTHER OS01G0253100 PROTEIN 629 952 - -
Prci2g3290 1604 ProSiteProfiles Protein kinase domain profile. 1136 1403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3290 1604 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 658 760 - -
Prci2g3290 1604 ProSiteProfiles Protein kinase domain profile. 685 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3290 1604 FunFam Proline-rich receptor-like protein kinase PERK8 211 324 - -
Prci2g3290 1604 MobiDBLite consensus disorder prediction 1500 1525 - -
Prci2g3290 1604 MobiDBLite consensus disorder prediction 1484 1533 - -
Prci2g3290 1604 SUPERFAMILY Protein kinase-like (PK-like) 669 951 IPR011009 -
Prci2g3290 1604 MobiDBLite consensus disorder prediction 129 163 - -
Prci2g3290 1604 SUPERFAMILY Protein kinase-like (PK-like) 234 529 IPR011009 -
Prci2g3290 1604 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 761 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3290 Prci-Chr2 41530528 41545467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3290 669 947 Trihelix Transcription Factor Family AT1G70460 38.966 2.75e-56 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Prci2g3290 PK_Tyr_Ser-Thr 2.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3290 - - pcin:129302218 3196.76