Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3281 ATGTCACCAGGGCCTGAGAGAGACAAGCCAGACGGTAACAAGTATGAAGGGAGCATCTATATGGTCTTTGAATATATGGAACATGATCTAGCAGGCCTTCTTAAACGACCAGGGATGAACTTGACGTCTTCCCAAATTAAGTGTTGCATGAAACAGCTTCTGCTGGCGCTTCACTTTTGCCATGCAAATAATGTACTTCATCGTGACGTCAAAACTGCTAATATTCTGATGAACAATGAAGGAGTCCTGAAACTTGCTGATTTTGGACTGGCAAAGAAATCTTCTGATTCAGAGCATACAAATCCGGTCGTTACATTATGGTACAGGCCCCCAGAGTTGCTGCTAGGGGCAACAAAGTATGGACCGGCTGTTGATATTTGGTCTGCTGGGTGTCTTTTTGCTGCGCTTCTTAATGGGAATGGGAAGTGTATGTTCCGTGGAAAAACTGAGGCAGACACTCTGGGTCAAATTTGTGATCTCTGCGGAAAACCAAATGAGACAAACTGGCCTGGGGTTTCTAATCTACCTTACTATTATACATTGCCACTAAGACCAATGCAAAGACGCCTTAGGGAAGTTTACGCACATTTTGGCAAAGAAGCTCTTGACTTGTTGGACAGGATGTTGACGCTTAATCCTGATAAGAGGATCGATGCTTCTAATGCTCTTGATTCTGACTATTTCTGGACTGATCCGTTGCCCTGTGATCCCAACAGTATGCCCAAGTACAAGGAATCACATTACTACGAGGTGAGGCAAAAAATAAAGAGCCTGAAAGAAATGCTGTCTGAAAAAACTCCCAGTCATCTGTTGATGCCACCTCCAAAGATGTCTTACAGCTCTCAAGCGGGGTCTAGCGGCTGTCAACCTCATCTCAGTGGACCACATCCTCCTCCTCCTTTTCAAGGGGGGCCTAGTGTCGGTTCTCATGGTGGATGTGGTAGTGGCCGTGGCTATGAAGTTGGAGCTCCATATTATCCTCAAGGATATGGACCATCATCTCATGGGTCTAGGCCTCATGGTGCAGGTGCCAGTGGCAGTGGCTGTGGAGGCCGAACTCCAAATTATCCTCAAGGATACGGATCATCATTTCATGGGTCTATGTCTCATGGTGCAGGTGCCAGTGGCAGTGGCTGTGGAGGCGGAACTCCAAATTTTCCTCAAGGATACGGATCATCATTTCATGGGTCTATGTCTCATGATGCAGGTGCCAGTAGCAGTGGCTATGGAGGTGCCAGCAGCAGTGGTTATGGAGGTAGAGCTCCAAATTATCCTCCAGGACATGGATCATCATTTCATGGGTCTAGGTCTCGTGGTGCAGGTGCCAGTGGCAGTGGCTATGGAGGTAGACCTCCAAATTATCCTCCAGGACATGCATCATCATTTCATGGGTCTAGAGATCTAGAACATGGATCATCATCTCATGGTGCAGGTGCTAGTAGCAGTGGCTATAGGGGTAGAATTCCAGATTATCCTCAAGGATATGGATCATCATCTCATGGGTCTTGGTCTCGTGGTGCCAGTGCCGGTAGCCGTGGCTATGGAGGTAGAGCTGCTAGTCATCACCGTGGTGGTTCTTCCAGTTCTAGGTAA 1593 0.4746 MSPGPERDKPDGNKYEGSIYMVFEYMEHDLAGLLKRPGMNLTSSQIKCCMKQLLLALHFCHANNVLHRDVKTANILMNNEGVLKLADFGLAKKSSDSEHTNPVVTLWYRPPELLLGATKYGPAVDIWSAGCLFAALLNGNGKCMFRGKTEADTLGQICDLCGKPNETNWPGVSNLPYYYTLPLRPMQRRLREVYAHFGKEALDLLDRMLTLNPDKRIDASNALDSDYFWTDPLPCDPNSMPKYKESHYYEVRQKIKSLKEMLSEKTPSHLLMPPPKMSYSSQAGSSGCQPHLSGPHPPPPFQGGPSVGSHGGCGSGRGYEVGAPYYPQGYGPSSHGSRPHGAGASGSGCGGRTPNYPQGYGSSFHGSMSHGAGASGSGCGGGTPNFPQGYGSSFHGSMSHDAGASSSGYGGASSSGYGGRAPNYPPGHGSSFHGSRSRGAGASGSGYGGRPPNYPPGHASSFHGSRDLEHGSSSHGAGASSSGYRGRIPDYPQGYGSSSHGSWSRGASAGSRGYGGRAASHHRGGSSSSR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3281 530 MobiDBLite consensus disorder prediction 397 530 - -
Prci2g3281 530 MobiDBLite consensus disorder prediction 330 350 - -
Prci2g3281 530 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3281 530 MobiDBLite consensus disorder prediction 266 314 - -
Prci2g3281 530 SUPERFAMILY Protein kinase-like (PK-like) 13 236 IPR011009 -
Prci2g3281 530 FunFam Cyclin-dependent kinase C-2 28 266 - -
Prci2g3281 530 SMART serkin_6 7 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3281 530 Pfam Protein kinase domain 16 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3281 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 65 77 IPR008271 GO:0004672|GO:0006468
Prci2g3281 530 MobiDBLite consensus disorder prediction 397 413 - -
Prci2g3281 530 Gene3D Transferase(Phosphotransferase) domain 1 26 228 - -
Prci2g3281 530 PANTHER CELL DIVISION PROTEIN KINASE 18 234 - -
Prci2g3281 530 Gene3D Phosphorylase Kinase; domain 1 15 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3281 Prci-Chr2 41376483 41380816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3281 2 385 Core Cell Cycle Gene Families AT5G64960 48.148 5.95e-114 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci2g3281 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3281 K08819 - pda:120103654 371.703