Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g3281 | ATGTCACCAGGGCCTGAGAGAGACAAGCCAGACGGTAACAAGTATGAAGGGAGCATCTATATGGTCTTTGAATATATGGAACATGATCTAGCAGGCCTTCTTAAACGACCAGGGATGAACTTGACGTCTTCCCAAATTAAGTGTTGCATGAAACAGCTTCTGCTGGCGCTTCACTTTTGCCATGCAAATAATGTACTTCATCGTGACGTCAAAACTGCTAATATTCTGATGAACAATGAAGGAGTCCTGAAACTTGCTGATTTTGGACTGGCAAAGAAATCTTCTGATTCAGAGCATACAAATCCGGTCGTTACATTATGGTACAGGCCCCCAGAGTTGCTGCTAGGGGCAACAAAGTATGGACCGGCTGTTGATATTTGGTCTGCTGGGTGTCTTTTTGCTGCGCTTCTTAATGGGAATGGGAAGTGTATGTTCCGTGGAAAAACTGAGGCAGACACTCTGGGTCAAATTTGTGATCTCTGCGGAAAACCAAATGAGACAAACTGGCCTGGGGTTTCTAATCTACCTTACTATTATACATTGCCACTAAGACCAATGCAAAGACGCCTTAGGGAAGTTTACGCACATTTTGGCAAAGAAGCTCTTGACTTGTTGGACAGGATGTTGACGCTTAATCCTGATAAGAGGATCGATGCTTCTAATGCTCTTGATTCTGACTATTTCTGGACTGATCCGTTGCCCTGTGATCCCAACAGTATGCCCAAGTACAAGGAATCACATTACTACGAGGTGAGGCAAAAAATAAAGAGCCTGAAAGAAATGCTGTCTGAAAAAACTCCCAGTCATCTGTTGATGCCACCTCCAAAGATGTCTTACAGCTCTCAAGCGGGGTCTAGCGGCTGTCAACCTCATCTCAGTGGACCACATCCTCCTCCTCCTTTTCAAGGGGGGCCTAGTGTCGGTTCTCATGGTGGATGTGGTAGTGGCCGTGGCTATGAAGTTGGAGCTCCATATTATCCTCAAGGATATGGACCATCATCTCATGGGTCTAGGCCTCATGGTGCAGGTGCCAGTGGCAGTGGCTGTGGAGGCCGAACTCCAAATTATCCTCAAGGATACGGATCATCATTTCATGGGTCTATGTCTCATGGTGCAGGTGCCAGTGGCAGTGGCTGTGGAGGCGGAACTCCAAATTTTCCTCAAGGATACGGATCATCATTTCATGGGTCTATGTCTCATGATGCAGGTGCCAGTAGCAGTGGCTATGGAGGTGCCAGCAGCAGTGGTTATGGAGGTAGAGCTCCAAATTATCCTCCAGGACATGGATCATCATTTCATGGGTCTAGGTCTCGTGGTGCAGGTGCCAGTGGCAGTGGCTATGGAGGTAGACCTCCAAATTATCCTCCAGGACATGCATCATCATTTCATGGGTCTAGAGATCTAGAACATGGATCATCATCTCATGGTGCAGGTGCTAGTAGCAGTGGCTATAGGGGTAGAATTCCAGATTATCCTCAAGGATATGGATCATCATCTCATGGGTCTTGGTCTCGTGGTGCCAGTGCCGGTAGCCGTGGCTATGGAGGTAGAGCTGCTAGTCATCACCGTGGTGGTTCTTCCAGTTCTAGGTAA | 1593 | 0.4746 | MSPGPERDKPDGNKYEGSIYMVFEYMEHDLAGLLKRPGMNLTSSQIKCCMKQLLLALHFCHANNVLHRDVKTANILMNNEGVLKLADFGLAKKSSDSEHTNPVVTLWYRPPELLLGATKYGPAVDIWSAGCLFAALLNGNGKCMFRGKTEADTLGQICDLCGKPNETNWPGVSNLPYYYTLPLRPMQRRLREVYAHFGKEALDLLDRMLTLNPDKRIDASNALDSDYFWTDPLPCDPNSMPKYKESHYYEVRQKIKSLKEMLSEKTPSHLLMPPPKMSYSSQAGSSGCQPHLSGPHPPPPFQGGPSVGSHGGCGSGRGYEVGAPYYPQGYGPSSHGSRPHGAGASGSGCGGRTPNYPQGYGSSFHGSMSHGAGASGSGCGGGTPNFPQGYGSSFHGSMSHDAGASSSGYGGASSSGYGGRAPNYPPGHGSSFHGSRSRGAGASGSGYGGRPPNYPPGHASSFHGSRDLEHGSSSHGAGASSSGYRGRIPDYPQGYGSSSHGSWSRGASAGSRGYGGRAASHHRGGSSSSR | 530 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g3281 | 530 | MobiDBLite | consensus disorder prediction | 397 | 530 | - | - | |
Prci2g3281 | 530 | MobiDBLite | consensus disorder prediction | 330 | 350 | - | - | |
Prci2g3281 | 530 | ProSiteProfiles | Protein kinase domain profile. | 1 | 228 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g3281 | 530 | MobiDBLite | consensus disorder prediction | 266 | 314 | - | - | |
Prci2g3281 | 530 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 236 | IPR011009 | - | |
Prci2g3281 | 530 | FunFam | Cyclin-dependent kinase C-2 | 28 | 266 | - | - | |
Prci2g3281 | 530 | SMART | serkin_6 | 7 | 228 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g3281 | 530 | Pfam | Protein kinase domain | 16 | 228 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g3281 | 530 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 65 | 77 | IPR008271 | GO:0004672|GO:0006468 | |
Prci2g3281 | 530 | MobiDBLite | consensus disorder prediction | 397 | 413 | - | - | |
Prci2g3281 | 530 | Gene3D | Transferase(Phosphotransferase) domain 1 | 26 | 228 | - | - | |
Prci2g3281 | 530 | PANTHER | CELL DIVISION PROTEIN KINASE | 18 | 234 | - | - | |
Prci2g3281 | 530 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 25 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g3281 | Prci-Chr2 | 41376483 | 41380816 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g3281 | 2 | 385 | Core Cell Cycle Gene Families | AT5G64960 | 48.148 | 5.95e-114 | 343 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Prci2g3281 | Pkinase | 2.7e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g3281 | K08819 | - | pda:120103654 | 371.703 |