Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3276 ATGCGTTGTGCGCGTTGCTTCACGTGTTTATTGTCTCGGCTATCAGATTCACCCTCTTCTTTAAGAAGAAGAACAGCGAGATGGTCAAATGGAGGAACCATAGAAGAATACCCACCACGCTTGATCAGATTCCTTGTCAGAGGGGAAAGAGTTGAACTTTATCAGAAAGTTAAGGAATCATTCAGAATGAGCCAGTCTAAAATCAAGCGTCGTATAGGTAAATATGAGGTGGGAACGACCATTGGTGAGGGAACATTTGCAAAAGTGAAATTTGCTAGGAACTCTGAGACTGGGGAGGCTGTGGCTATTAAAATTCTGGAGAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAACAGATCAGGCGGGAAATAGCAACAATGAAGTTAATCAAGCATCCAAATGTTGTTCAATTGTATGAGGTAATGGGAAGCAGGACAAAAATATATATAGTTTTGGAGTTTGTTACTGGAGGGGAGCTCTTTGACAAAATTGTAAACAATGGGCGAATGAATGAAAAAGAAGCACGTAGTTATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCATAGAGACCTCAAGCCAGAGAATTTGCTGCTAGATGCTTCTGGCCAGCTTAAAGTTTCTGATTTTGGTTTGAGTGCACTATCACAAGAAGTCAAGGATGATGGACTGCTTCATACTACATGTGGAACTCCAAACTATGTTGCTCCTGAGGTCCTTGATGATAGAGGCTATGATGGAGCAACTGCGGACTTGTGGTCTTGTGGAGTGATTCTCTTTGTATTACTTGCAGGTTACTTGCCTTTCGATGACCCTAATCTTATGAACCTATATAAAAAAATATCTGCTGCCGAATTTACTTGTCCCCCATGGATGTCCTTCAGTGCCAGGAAATTGATAACTCGAATTTTGGATCCTAACCCCATGACACGTATCACTATATCTGAGATCTTGGATGATGAATGGTTTAAGAAAGATTACAAGCCTGCAGTTTTTGAGGAGACAGGGAAGACCAACCTTGATGACATTGAAGCTGTGTTTAGAGATTCTGAAGAGCACCATGTGATGGAAAAGAAGGAAGAACAGCCAACAGCCATTAATGCATTTGAATTAATTTCTATGTCCAAAGGGCTAAACCTTGAGAACTTGTTTGATATAGAGCAGGCTTTGAAAAGAGAAACAAGGTTCACATCAAGATGCCCGGCGAAAGAGATAGTTAACAAGATTGAAGAAGCTGTAAAGCCTCTTGGTTTTGATGTCCAGAAGAAAAACTACAAGATGAGGCTCGAGAATGTGAAAGCAGGAAGGAAGGGAAACCTTAATATTGCCACTGAGATATTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTGAGGAAAGCAAAAGGTGATACATTGGAGTTTCACAAGTTCTACAAAAATCTTTCAACAAGGCTTGATGATGTTGTTTGGAAAGCTGAGGACACTCAAGAAGCAAAGTAA 1503 0.4098 MRCARCFTCLLSRLSDSPSSLRRRTARWSNGGTIEEYPPRLIRFLVRGERVELYQKVKESFRMSQSKIKRRIGKYEVGTTIGEGTFAKVKFARNSETGEAVAIKILEKEKVLKHKMAEQIRREIATMKLIKHPNVVQLYEVMGSRTKIYIVLEFVTGGELFDKIVNNGRMNEKEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDASGQLKVSDFGLSALSQEVKDDGLLHTTCGTPNYVAPEVLDDRGYDGATADLWSCGVILFVLLAGYLPFDDPNLMNLYKKISAAEFTCPPWMSFSARKLITRILDPNPMTRITISEILDDEWFKKDYKPAVFEETGKTNLDDIEAVFRDSEEHHVMEKKEEQPTAINAFELISMSKGLNLENLFDIEQALKRETRFTSRCPAKEIVNKIEEAVKPLGFDVQKKNYKMRLENVKAGRKGNLNIATEIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTRLDDVVWKAEDTQEAK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3276 500 Pfam Protein kinase domain 75 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3276 500 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 67 481 - -
Prci2g3276 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Prci2g3276 500 ProSiteProfiles Protein kinase domain profile. 75 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3276 500 FunFam Non-specific serine/threonine protein kinase 68 371 - -
Prci2g3276 500 SUPERFAMILY Protein kinase-like (PK-like) 71 347 IPR011009 -
Prci2g3276 500 Gene3D Kinase associated domain 1, KA1 367 492 - -
Prci2g3276 500 Pfam NAF domain 370 429 IPR004041 GO:0007165
Prci2g3276 500 Gene3D Phosphorylase Kinase; domain 1 64 154 - -
Prci2g3276 500 ProSiteProfiles NAF domain profile. 368 392 IPR018451 GO:0007165
Prci2g3276 500 Gene3D Transferase(Phosphotransferase) domain 1 155 358 - -
Prci2g3276 500 SMART serkin_6 75 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3276 500 CDD STKc_SnRK3 74 329 - -
Prci2g3276 500 FunFam Non-specific serine/threonine protein kinase 367 492 - -
Prci2g3276 500 CDD CIPK_C 374 488 - -
Prci2g3276 500 FunFam Non-specific serine/threonine protein kinase 66 154 - -
Prci2g3276 500 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3276 Prci-Chr2 41345738 41353210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3276 65 473 CBL-interacting serine-threonine protein kinases AT2G26980 78.484 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci2g3276 Pkinase 9.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3276 - - pcin:129303143 911.368