Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3274 ATGCTTCACTGTTACTTCCTGTCTCTTTGTTTTAGCCTCTCTCTTCACTCGGCTGCGTCATTTTCTGTGTTGTTTATTCAATGTCCTGCATTTCTGTTGACGTCTTCCTCTCAAATCCATGTCTTATATGCGTTGTGCGCGTTGCTTCACGTGTTTATTGTCTCGGCTATCAGATTCACCCTCTTCTTTAAGAAGAAGAACAGCGAGATGGTCAAATGGAGGAACCATAGAAGAATACCCACCACGCTTGATCAGGGGACCGTGATAGCTTGCCTTTTGGATTCGTATTCAATATCCTATTTGAGGGCAATCATATACTGTAGATCATCTGATAGATTTCCAGGATTCCTTGTCAGAGGGGAAAGAGTTGAACTTTATCAGAAAGTTAAGGAATCATTCAGAATGAGCCAGTCTAAAATCAAGCGTCGTATAGGTAAATATGAGGTGGGAACGACCATTGGTGAGGGAACATTTGCAAAAGTGAAATTTGCTAGGAACTCTGAGACTGGGGAGGCTGTGGCTATTAAAATTCTGGAGAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAACAGATCAGGCGGGAAATAGCAACAATGAAGTTAATCAAGCATCCAAATGTTGTTCAATTGTATGAGGTAATGGGAAGCAGGACAAAAATATATATAGTTTTGGAGTTTGTTACTGGAGGGGAGCTCTTTGACAAAATTGTAAACAATGGGCGAATGAATGAAAAAGAAGCACGTAGTTATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCATAGAGACCTCAAGCCAGAGAATTTGCTGCTAGATGCTTCTGGCCAGCTTAAAGTTTCTGATTTTGGTTTGAGTGCACTATCACAAGAAGTCAAGGATGATGGACTGCTTCATACTACATGTGGAACTCCAAACTATGTTGCTCCTGAGGTCCTTGATGATAGAGGCTATGATGGAGCAACTGCGGACTTGTGGTCTTGTGGAGTGATTCTCTTTGTATTACTTGCAGGTTACTTGCCTTTCGATGACCCTAATCTTATGAACCTATATAAAAAAATATCTGCTGCCGAATTTACTTGTCCCCCATGGATGTCCTTCAGTGCCAGGAAATTGATAACTCGAATTTTGGATCCTAACCCCATGACACGTATCACTATATCTGAGATCTTGGATGATGAATGGTTTAAGAAAGATTACAAGCCTGCAGTTTTTGAGGAGACAGGGAAGACCAACCTTGATGACATTGAAGCTGTGTTTAGAGATTCTGAAGAGCACCATGTGATGGAAAAGAAGGAAGAACAGCCAACAGCCATTAATGCATTTGAATTAATTTCTATGTCCAAAGGGCTAAACCTTGAGAACTTGTTTGATATAGAGCAGGCTTTGAAAAGAGAAACAAGGTTCACATCAAGATGCCCGGCGAAAGAGATAGTTAACAAGATTGAAGAAGCTGTAAAGCCTCTTGGTTTTGATGTCCAGAAGAAAAACTACAAGATGAGGCTCGAGAATGTGAAAGCAGGAAGGAAGGGAAACCTTAATATTGCCACTGAGATATTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTGAGGAAAGCAAAAGGTGATACATTGGAGTTTCACAAGTTCTACAAAAATCTTTCAACAAGGCTTGATGATGTTGTTTGGAAAGCTGAGGACACTCAAGAAGCAAAGTAA 1719 0.4095 MLHCYFLSLCFSLSLHSAASFSVLFIQCPAFLLTSSSQIHVLYALCALLHVFIVSAIRFTLFFKKKNSEMVKWRNHRRIPTTLDQGTVIACLLDSYSISYLRAIIYCRSSDRFPGFLVRGERVELYQKVKESFRMSQSKIKRRIGKYEVGTTIGEGTFAKVKFARNSETGEAVAIKILEKEKVLKHKMAEQIRREIATMKLIKHPNVVQLYEVMGSRTKIYIVLEFVTGGELFDKIVNNGRMNEKEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDASGQLKVSDFGLSALSQEVKDDGLLHTTCGTPNYVAPEVLDDRGYDGATADLWSCGVILFVLLAGYLPFDDPNLMNLYKKISAAEFTCPPWMSFSARKLITRILDPNPMTRITISEILDDEWFKKDYKPAVFEETGKTNLDDIEAVFRDSEEHHVMEKKEEQPTAINAFELISMSKGLNLENLFDIEQALKRETRFTSRCPAKEIVNKIEEAVKPLGFDVQKKNYKMRLENVKAGRKGNLNIATEIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTRLDDVVWKAEDTQEAK 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3274 572 FunFam Non-specific serine/threonine protein kinase 138 226 - -
Prci2g3274 572 Pfam NAF domain 442 501 IPR004041 GO:0007165
Prci2g3274 572 SMART serkin_6 147 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3274 572 Gene3D Kinase associated domain 1, KA1 439 564 - -
Prci2g3274 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Prci2g3274 572 CDD STKc_SnRK3 146 401 - -
Prci2g3274 572 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Prci2g3274 572 ProSiteProfiles NAF domain profile. 440 464 IPR018451 GO:0007165
Prci2g3274 572 CDD CIPK_C 446 560 - -
Prci2g3274 572 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 139 553 - -
Prci2g3274 572 ProSiteProfiles Protein kinase domain profile. 147 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3274 572 Gene3D Transferase(Phosphotransferase) domain 1 227 429 - -
Prci2g3274 572 FunFam Non-specific serine/threonine protein kinase 439 564 - -
Prci2g3274 572 SUPERFAMILY Protein kinase-like (PK-like) 143 419 IPR011009 -
Prci2g3274 572 Pfam Protein kinase domain 147 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3274 572 Gene3D Phosphorylase Kinase; domain 1 136 226 - -
Prci2g3274 572 FunFam Non-specific serine/threonine protein kinase 140 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3274 Prci-Chr2 41345738 41353350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3274 137 545 CBL-interacting serine-threonine protein kinases AT2G26980 78.484 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci2g3274 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3274 - - pcin:129303143 1121.3