Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3225 ATGCTTCAAAGCTTGGTCCCTCGATCCTCTCTTTCTGAGACTAATCGTCCTAACGGTGCCTCCTCCGCCATGAAGACCAAGCGCGTCGACCGTGACCTTGATGATGCTGCCGGCGACGGTGATGATCCTTCCTCGTTCAAAAGGCCGAGCTCCGGGAGGAATTTCTCCGGCGAGGCCTCTGTCTCCGGCGAGAAGACTGTCGAGGAAGGGGGAGGCCATGAGGATCAGGAGCCGCTGTTCGAAGGTACCGAGTCAACTGGTCTTAGACTTCTCGGGCTGTTGCTACAATGTGCCGAGTGCGTCGCCATGGACAACCTGGATGATGCCAGTGACCTCTTGCCGGAGATAGCAGAGCTGTCCTCGCCGTACGGGACGTCGCCGGAACGCGTCGGCGCGTACTTTGCACACGCGCTGCAGGCGCGCGTCGTCAGCTCCTGCCTCGGCAGTTACTCGCCTCTCACCACGAAATCGCACACTCTCGTTCAGTCTCAGCGAATCTTTAACGCCTTCCAATCCTACAACTCCGTCTCTCCTCTCGTCAAATTCTCGCACTTCACAGCCAACCAAGCCATCTTCCAGGCCCTCGACGGCGAAGATTGCGTCCACGTCATCGACCTGGACATCATGCAGGGCCTTCAATGGCCAGGATTGTTCCACATCCTTGCCTCTCGCTCGAGGAAGATCCGATCAATGAGGATCACCGGGTTCGGATCCTCCTCCGAGTTGCTCGAATCGACCGGCCGGCGGCTCGCCGACTTCGCAAGCTCACTCAGCTTACCCTTCGAGTTCCACCCTGTGGAGGGTAAAATCGGAAACATAACCGAACTGAGTCAACTCGGGGTGAGGCCGAACGAGGCCATAGTGGTCCATTGGATGCACCATTGCTTGTACGATATCACCGGAAGCGATTTGGGGACGTTGAGGTTGTTGACTCTGTTGAGGCCGAAGCTGATCACGACGGTGGAACAGGATCTGAGTCACGCCGGGAGCTTCCTCGCGAGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGACGGATTGAGTGGGGACAGCACAGAGAGGCATACGGTGGAGCAGCAGCTGTTTGGGTGCGAGATAAGAAACATCGTTGCCGTTGGTGGGCCCAAGAGGACCGGTGAAGTGAAGGTCGAGAGATGGGGCGATGAGCTGAGGCGGATCGGGTTCCGACCCGTGTCTCTACGGGGCAACCCGGCCTCCCAAGCGAGCCTCTTGCTGGGTCTGTACCCATGGAGAGGGTACACTCTGGTGGAAGAGAATGGGTGTCTCAAGTTGGGATGGAAGGATCTTTCTCTTCTGACCGCATCTGCGTGGCAGCCGTCGGATTAG 1365 0.581 MLQSLVPRSSLSETNRPNGASSAMKTKRVDRDLDDAAGDGDDPSSFKRPSSGRNFSGEASVSGEKTVEEGGGHEDQEPLFEGTESTGLRLLGLLLQCAECVAMDNLDDASDLLPEIAELSSPYGTSPERVGAYFAHALQARVVSSCLGSYSPLTTKSHTLVQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDCVHVIDLDIMQGLQWPGLFHILASRSRKIRSMRITGFGSSSELLESTGRRLADFASSLSLPFEFHPVEGKIGNITELSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTLLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLSGDSTERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDELRRIGFRPVSLRGNPASQASLLLGLYPWRGYTLVEENGCLKLGWKDLSLLTASAWQPSD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3225 454 MobiDBLite consensus disorder prediction 47 61 - -
Prci2g3225 454 MobiDBLite consensus disorder prediction 1 22 - -
Prci2g3225 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 71 446 IPR005202 -
Prci2g3225 454 MobiDBLite consensus disorder prediction 1 80 - -
Prci2g3225 454 ProSiteProfiles GRAS family profile. 81 451 IPR005202 -
Prci2g3225 454 MobiDBLite consensus disorder prediction 25 42 - -
Prci2g3225 454 Pfam GRAS domain family 92 451 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3225 Prci-Chr2 40738025 40739939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3225 24 454 GRAS Transcription Factor Family AT5G41920 65.367 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci2g3225 GRAS 1.8e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3225 - - zju:107404603 702.59