Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3220 ATGGCTTCTGCTACTATCTCACACCTCTCCTCAACCTTATCTGATGGCAACTTTCACCGGAGGAACAATTTTGGGTTGTCGCCTTTCAGTTCTTCTGTCATCCATTTTCCTGTTTATACTAATATTCGCAATTCTAAGCCCAATGGGTATTCTTCTGTGAGATGTCAGTCAATTGATGCTGATGAGAGGAAGTCAAATAGGAATCTTCTAGATAATGCAAGCAACATACTTACGGAACTTTTGAGTGGGGGGAGCATTGGGTCCATGCCTACGGCTGAAGGTGCAGTCTCAGATCTGTTTGGTCGGCCTCTCTTCTTCTCACTATATGATTGGTTCTTGGAGCACGGGGCTGTGTATAAACTTGCATTTGGGCCAAAAGCATTTGTTGTTGTATCAGATCCCATAGTTGCAAGACATATTCTGCGAGAAAATGCATTTTGTTATGACAAGGGAGTACTTGCTGATATCTTGGAACCAATAATGGGCAAAGGACTCATACCTGCAGATCTTGATACTTGGAAGCAAAGGAGAAGAGTCATTGCTCCTGGTTTTCATGTTTCATATCTGGAAGCTATGATCAAAGTATTCACAGCTTGCTCAGAAAGAACAATATCAAAGTTCAATAAACTTCTTGAAGGAGCAGAGGACAATAATGAACAGAAGTCAATTGAATTGGATCTTGAAGCAGAGTTTTCTAGTTTAGCTCTTGATATTATCGGGCTTGGTGTTTTCAACTATGACTTTGGTTCTGTGACTAAAGAATCTCCTGTCATAAAGGCAGTCTATGGCACTCTTTTTGAAGCTGAGCATAGATCCACTTTCTACGTTCCATATTGGAAAATTCCTTTGGCTAGGTGGATAGTCCCAAGGCAGAGAAAGTTTCAGAGTGATCTGAAGGTTATTAATAGCTGCCTTGATGAGCTTATAAAAAATGCGAAAGAGAGCAGACAGGAAACAGATGTTGAGAAACTGCAACAAAGGGACTACTTAAATTTGAAGGATGCAAGTCTTTTGCGTTTCCTAGTTGATATGCGGGGAGCTGATGTTGATGATCGACAGCTGAGGGATGACTTAATGACTATGCTTATTGCTGGTCATGAGACCACAGCTGCAGTTCTGACATGGGCATGTTTCCTGCTAGCTCAAAATACGACTAAAATGAAGAAGGCTCAAGCAGAGGTGGATTTGGTACTGGGCGAGGGGAGACCTACTCTTGAGTCTCTTAAAAACCTGCCGTACATAAGACTTATTGTCATAGAGGCTCTTCGTTTGTATCCCCAACCTCCTTTGCTGATTAGACGTTCACTAAAGTCAGATGTGTTACCAGGAGGATACAAAGGAGATAAAGATGGTTATGCAATTCCTGCTGGGACCGATCTCTTCATATCTGTATATAACCTCCATAGATCTCCATACTTCTGGGACTCTCCTCATGAATTCGAGCCAGAGAGATTTCTGGTGCAAAAAAAGAGTGAAGAAATTGAAGGATGGGCTGGCTTTGATCCATCTCGAAGTCCTGGAGCCTTGTATCCAAACGAGATTGTATCAGATTTCGCTTTCTTGCCTTTTGGTGGTGGACCTAGAAAATGTGTTGGGGACCAATTTGCTCTCATGGAGTCTATTGTAGCTCTGGCTTTGTTGCTGCAAAATTTTGATGTGGAATTGAGGGGAACTCCTGAATCAGTGGAACTGGTTACTGGGGCAACCATCCATACAAAAAATGGAATGTGGTGCAAACTCAGGAAGAGATCTAGCTCGCATCATTGA 1767 0.4228 MASATISHLSSTLSDGNFHRRNNFGLSPFSSSVIHFPVYTNIRNSKPNGYSSVRCQSIDADERKSNRNLLDNASNILTELLSGGSIGSMPTAEGAVSDLFGRPLFFSLYDWFLEHGAVYKLAFGPKAFVVVSDPIVARHILRENAFCYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHVSYLEAMIKVFTACSERTISKFNKLLEGAEDNNEQKSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYVPYWKIPLARWIVPRQRKFQSDLKVINSCLDELIKNAKESRQETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWACFLLAQNTTKMKKAQAEVDLVLGEGRPTLESLKNLPYIRLIVIEALRLYPQPPLLIRRSLKSDVLPGGYKGDKDGYAIPAGTDLFISVYNLHRSPYFWDSPHEFEPERFLVQKKSEEIEGWAGFDPSRSPGALYPNEIVSDFAFLPFGGGPRKCVGDQFALMESIVALALLLQNFDVELRGTPESVELVTGATIHTKNGMWCKLRKRSSSHH 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3220 588 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 PRINTS P450 superfamily signature 521 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 PRINTS P450 superfamily signature 530 541 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 PRINTS P450 superfamily signature 364 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 PANTHER CYTOCHROME P450 FAMILY 4 114 583 - -
Prci2g3220 588 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 523 532 IPR017972 GO:0005506|GO:0016705
Prci2g3220 588 Coils Coil 204 224 - -
Prci2g3220 588 SUPERFAMILY Cytochrome P450 100 583 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 Gene3D Cytochrome P450 92 588 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 Pfam Cytochrome P450 112 578 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 CDD CYP97 106 577 - -
Prci2g3220 588 PRINTS E-class P450 group I signature 112 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 PRINTS E-class P450 group I signature 530 553 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 PRINTS E-class P450 group I signature 373 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 PRINTS E-class P450 group I signature 353 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3220 588 PRINTS E-class P450 group I signature 520 530 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3220 Prci-Chr2 40634153 40662558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3220 52 584 Cytochrome P450 AT4G15110 79.362 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3220 K24543 - gmx:606504 988.408