Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3218 ATGGCTTCTGCTACTATCTCACACCTCTCCTCAACCTTATCTGATGGCAACTTTCACCGGAGGAACAATTTTGGGTTGTCGCCTTTCAGTTCTTCTGTCATCCATTTTCCTGTTTATACTAATATTCGCAATTCTAAGCCCAATGGGTATTCTTCTGTGAGATGTCAGTCAATTGATGCTGATGAGAGGAAGTCAAATAGGAATCTTCTAGATAATGCAAGCAACATACTTACGGAACTTTTGAGTGGGGGGAGCATTGGGTCCATGCCTACGGCTGAAGGTGCAGTCTCAGATCTGTTTGGTCGGCCTCTCTTCTTCTCACTATATGATTGGTTCTTGGAGCACGGGGCTGTGTATAAACTTGCATTTGGGCCAAAAGCATTTGTTGTTGTATCAGATCCCATAGTTGCAAGACATATTCTGCGAGAAAATGCATTTTGTTATGACAAGGGAGTACTTGCTGATATCTTGGAACCAATAATGGGCAAAGGACTCATACCTGCAGATCTTGATACTTGGAAGCAAAGGAGAAGAGTCATTGCTCCTGGTTTTCATGTTTCATATCTGGAAGCTATGATCAAAGTATTCACAGCTTGCTCAGAAAGAACAATATCAAAGTTCAATAAACTTCTTGAAGGAGCAGAGGACAATAATGAACAGAAGTCAATTGAATTGGATCTTGAAGCAGAGTTTTCTAGTTTAGCTCTTGATATTATCGGGCTTGGTGTTTTCAACTATGACTTTGGTTCTGTGACTAAAGAATCTCCTGTCATAAAGGCAGTCTATGGCACTCTTTTTGAAGCTGAGCATAGATCCACTTTCTACGTTCCATATTGGAAAATTCCTTTGGCTAGGTGGATAGTCCCAAGGCAGAGAAAGTTTCAGAGTGATCTGAAGGTTATTAATAGCTGCCTTGATGAGCTTATAAAAAATGCGAAAGAGAGCAGACAGGATCTTGGACCCATCACCAAATTGTATTTTCTCTGGCAGGAAACAGATGTTGAGAAACTGCAACAAAGGGACTACTTAAATTTGAAGCTGAGGGATGACTTAATGACTATGCTTATTGCTGGTCATGAGACCACAGCTGCAGTTCTGACATGGGCATGTTTCCTGCTAGCTCAAAATACGACTAAAATGAAGAAGGCTCAAGCAGAGGTGGATTTGGTACTGGGCGAGGGGAGACCTACTCTTGAGTCTCTTAAAAACCTGCCGTACATAAGACTTATTGTCATAGAGGCTCTTCGTTTGTATCCCCAACCTCCTTTGCTGATTAGACGTTCACTAAAGTCAGATGTGTTACCAGGAGGATACAAAGGAGATAAAGATGGTTATGCAATTCCTGCTGGGACCGATCTCTTCATATCTGTATATAACCTCCATAGATCTCCATACTTCTGGGACTCTCCTCATGAATTCGAGCCAGAGAGATTTCTGGTGCAAAAAAAGAGTGAAGAAATTGAAGGATGGGCTGGCTTTGATCCATCTCGAAGTCCTGGAGCCTTGTATCCAAACGAGATTGTATCAGATTTCGCTTTCTTGCCTTTTGGTGGTGGACCTAGAAAATGTGTTGGGGACCAATTTGCTCTCATGGAGTCTATTGTAGCTCTGGCTTTGTTGCTGCAAAATTTTGATGTGGAATTGAGGGGAACTCCTGAATCAGTGGAACTGGTTACTGGGGCAACCATCCATACAAAAAATGGAATGTGGTGCAAACTCAGGAAGAGATCTAGCTCGCATCATTGA 1746 0.4215 MASATISHLSSTLSDGNFHRRNNFGLSPFSSSVIHFPVYTNIRNSKPNGYSSVRCQSIDADERKSNRNLLDNASNILTELLSGGSIGSMPTAEGAVSDLFGRPLFFSLYDWFLEHGAVYKLAFGPKAFVVVSDPIVARHILRENAFCYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHVSYLEAMIKVFTACSERTISKFNKLLEGAEDNNEQKSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYVPYWKIPLARWIVPRQRKFQSDLKVINSCLDELIKNAKESRQDLGPITKLYFLWQETDVEKLQQRDYLNLKLRDDLMTMLIAGHETTAAVLTWACFLLAQNTTKMKKAQAEVDLVLGEGRPTLESLKNLPYIRLIVIEALRLYPQPPLLIRRSLKSDVLPGGYKGDKDGYAIPAGTDLFISVYNLHRSPYFWDSPHEFEPERFLVQKKSEEIEGWAGFDPSRSPGALYPNEIVSDFAFLPFGGGPRKCVGDQFALMESIVALALLLQNFDVELRGTPESVELVTGATIHTKNGMWCKLRKRSSSHH 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3218 581 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 516 525 IPR017972 GO:0005506|GO:0016705
Prci2g3218 581 Gene3D Cytochrome P450 92 581 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 Coils Coil 204 224 - -
Prci2g3218 581 PRINTS P450 superfamily signature 357 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 PRINTS P450 superfamily signature 514 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 PRINTS P450 superfamily signature 523 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 PANTHER CYTOCHROME P450 FAMILY 4 114 576 - -
Prci2g3218 581 PRINTS E-class P450 group I signature 523 546 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 PRINTS E-class P450 group I signature 513 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 PRINTS E-class P450 group I signature 112 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 PRINTS E-class P450 group I signature 366 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 PRINTS E-class P450 group I signature 346 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 SUPERFAMILY Cytochrome P450 100 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g3218 581 CDD CYP97 106 570 - -
Prci2g3218 581 Pfam Cytochrome P450 112 571 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3218 Prci-Chr2 40634151 40662558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3218 52 577 Cytochrome P450 AT4G15110 74.176 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3218 K24543 - gmx:606504 929.087