Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3207 ATGAGAAGTTTACTTCCTCAGAGGAGTTTAAAGGCAAAAAATTGTTCTCCGGATTGTGAAAGGGAAGTTCTCATTGTTTCTGATATTCCATCGTCAGATGGAACTTTGGATAAGCCTTCAACTTCAAGGTCCCTTTCTTTTAATAAGGTTTTGTTCCCTTCATCAACAAAAACATCAAATTCATTACCAGTTACACCAATTGCAAATACAGTTGCAGAGACTGTACAGGGAAGTCATCTAGGAAGTGATCCTGACTTAAGTAAAATGGAAGTCAAGCATCACATGACTCGGTCATTTTCAGTTCCAGTTAATATCAAAACCTCTAGTTTAAAGCGAACAGGTTCTAGGGGTTTGATCCGAGTAATTTCAGCAAGACCACATCCTGCAGCTGTTAATGACCATTCAATTGATAAAGCTTCAGTGCCAGAGATTGCCATTGAAGATGCTACCGAGGACATTCCTGAAGAAGAAGCAGTTTGTAGGATTTGTTTAATGGAGCTGGGGGAAGGTGGGGATACCCTCAAGATGGAGTGCAGTTGTAGAGGAGACCTTGCGCTTGCTCATCAAGAGTGTGCAGTAAAGTGGTTTAGTATAAAAGGAAACAAGACTTGTGATGTTTGCAAGCAGGATGTCCAAAACCTTCCAGTGACTCTGTTGAAAATCCAAAGTCCTCATCCTGCTGCTGGATGGTCATCAAATAGCTCACAGCAGACAGAAGTTTCTTTTCACAGGATCTGGCAGGATGTACCAGTTCTTGTCTTGGTCAGCATGCTAGCTTATTTTTGCTTTTTAGAGCAACTTCTGGTTTCAGATATGGGTCCTCGTGCTCTTGCCATCTCACTACCTTTCGCCTGCACATTTGGCCTTGTTGCCTCTTTGCTTGCTTCAACCATGGTGAGCAGGGATTACATGTGGGCCTATGCTTGCTTCCAGTTTGCAATTGTCATCTTGCTGGCTCATGTATTTTATACTATACGTAAATTAAACGTGGTTCTTTCAGTTATGCTTTCTTCATTTGCTGGATTTGGGATTGCAATGACTGTAAATTATCTGCTTAAGGAATTTTTAAGTTGGAGATTGAGAAGCCAGATGCAATCTATGAATCAGAGTCCAACACAGCAGGAACAAGGACAGCATAATAGGCGGCAAAGACAGCAGCAATAG 1164 0.4167 MRSLLPQRSLKAKNCSPDCEREVLIVSDIPSSDGTLDKPSTSRSLSFNKVLFPSSTKTSNSLPVTPIANTVAETVQGSHLGSDPDLSKMEVKHHMTRSFSVPVNIKTSSLKRTGSRGLIRVISARPHPAAVNDHSIDKASVPEIAIEDATEDIPEEEAVCRICLMELGEGGDTLKMECSCRGDLALAHQECAVKWFSIKGNKTCDVCKQDVQNLPVTLLKIQSPHPAAGWSSNSSQQTEVSFHRIWQDVPVLVLVSMLAYFCFLEQLLVSDMGPRALAISLPFACTFGLVASLLASTMVSRDYMWAYACFQFAIVILLAHVFYTIRKLNVVLSVMLSSFAGFGIAMTVNYLLKEFLSWRLRSQMQSMNQSPTQQEQGQHNRRQRQQQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3207 387 ProSiteProfiles Zinc finger RING-CH-type profile. 152 214 IPR011016 GO:0008270
Prci2g3207 387 SMART ringv_2 159 208 IPR011016 GO:0008270
Prci2g3207 387 Pfam RING-variant domain 160 207 IPR011016 GO:0008270
Prci2g3207 387 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 215 IPR013083 -
Prci2g3207 387 PANTHER OS02G0165000 PROTEIN 2 377 - -
Prci2g3207 387 SUPERFAMILY RING/U-box 156 211 - -
Prci2g3207 387 CDD RING_CH-C4HC3_MARCH 160 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3207 Prci-Chr2 40518771 40552722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3207 143 214 C3H Transcription Factor Family AT2G37950 45.205 1.67e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3207 - - qsa:O6P43_014398 508.449