Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3206 ATGCCATTTTTTCTCCTCCCCCAAATATTCCTTTTGGGATGCTCGTGCGCTCATGCATTTGAAGTCCTCAGTTTTGCATCACTCTCTCTCGTTTCTTGCCCTTGGGGATTTTCTTGGAATTCAATGGAAAAAACACATGCAGATGCAGATGCAGATGCTGGAGTTAGAAGTGATAGAGATTCCTTGTCAGATCCTGCTCATTATCATCGTCTACAGACACGCACGGGAAATGAAAAAGGTGATAATTCCTCCTTGCTTCAGCAGTCCAGACGACCAAGTCTCGCCTCTTTGCATATACCAGTAAGGTCAGTAGAAGGTGCGTTACCATCTTCTGCAAAGACAGATGTTCTATCCCTGTCAAGTCCAGGTTCCTCTCGTGGAGGACTGCCTCCAAGACCAAATTCAGCTAGAGTCAAGTCTTCCATGAGAAGTTTACTTCCTCAGAGGAGTTTAAAGGCAAAAAATTGTTCTCCGGATTGTGAAAGGGAAGTTCTCATTGTTTCTGATATTCCATCGTCAGATGGAACTTTGGATAAGCCTTCAACTTCAAGGTCCCTTTCTTTTAATAAGGTTTTGTTCCCTTCATCAACAAAAACATCAAATTCATTACCAGTTACACCAATTGCAAATACAGTTGCAGAGACTGTACAGGGAAGTCATCTAGGAAGTGATCCTGACTTAAGTAAAATGGAAGTCAAGCATCACATGACTCGGTCATTTTCAGTTCCAGTTAATATCAAAACCTCTAGTTTAAAGCGAACAGGTTCTAGGGGTTTGATCCGAGTAATTTCAGCAAGACCACATCCTGCAGCTGTTAATGACCATTCAATTGATAAAGCTTCAGTGCCAGAGATTGCCATTGAAGATGCTACCGAGGACATTCCTGAAGAAGAAGCAGTTTGTAGGATTTGTTTAATGGAGCTGGGGGAAGGTGGGGATACCCTCAAGATGGAGTGCAGTTGTAGAGGAGACCTTGCGCTTGCTCATCAAGAGTGTGCAGTAAAGTGGTTTAGTATAAAAGGAAACAAGACTTGTGATGTTTGCAAGCAGGATGTCCAAAACCTTCCAGTGACTCTGTTGAAAATCCAAAGTCCTCATCCTGCTGCTGGATGGTCATCAAATAGCTCACAGCAGACAGAAGTTTCTTTTCACAGGATCTGGCAGGATGTACCAGTTCTTGTCTTGGTCAGCATGCTAGCTTATTTTTGCTTTTTAGAGCAACTTCTGGTTTCAGATATGGGTCCTCGTGCTCTTGCCATCTCACTACCTTTCGCCTGCACATTTGGCCTTGTTGCCTCTTTGCTTGCTTCAACCATGGTGAGCAGGGATTACATGTGGGCCTATGCTTGCTTCCAGTTTGCAATTGTCATCTTGCTGGCTCATGTATTTTATACTATACGTAAATTAAACGTGGTTCTTTCAGTTATGCTTTCTTCATTTGCTGGATTTGGGATTGCAATGACTGTAAATTATCTGCTTAAGGAATTTTTAAGTTGGAGATTGAGAAGCCAGATGCAATCTATGAATCAGAGTCCAACACAGCAGGAACAAGGACAGCATAATAGGCGGCAAAGACAGCAGCAATAG 1587 0.4279 MPFFLLPQIFLLGCSCAHAFEVLSFASLSLVSCPWGFSWNSMEKTHADADADAGVRSDRDSLSDPAHYHRLQTRTGNEKGDNSSLLQQSRRPSLASLHIPVRSVEGALPSSAKTDVLSLSSPGSSRGGLPPRPNSARVKSSMRSLLPQRSLKAKNCSPDCEREVLIVSDIPSSDGTLDKPSTSRSLSFNKVLFPSSTKTSNSLPVTPIANTVAETVQGSHLGSDPDLSKMEVKHHMTRSFSVPVNIKTSSLKRTGSRGLIRVISARPHPAAVNDHSIDKASVPEIAIEDATEDIPEEEAVCRICLMELGEGGDTLKMECSCRGDLALAHQECAVKWFSIKGNKTCDVCKQDVQNLPVTLLKIQSPHPAAGWSSNSSQQTEVSFHRIWQDVPVLVLVSMLAYFCFLEQLLVSDMGPRALAISLPFACTFGLVASLLASTMVSRDYMWAYACFQFAIVILLAHVFYTIRKLNVVLSVMLSSFAGFGIAMTVNYLLKEFLSWRLRSQMQSMNQSPTQQEQGQHNRRQRQQQ 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3206 528 CDD RING_CH-C4HC3_MARCH 301 349 - -
Prci2g3206 528 PANTHER OS02G0165000 PROTEIN 75 518 - -
Prci2g3206 528 Pfam RING-variant domain 301 348 IPR011016 GO:0008270
Prci2g3206 528 ProSiteProfiles Zinc finger RING-CH-type profile. 293 355 IPR011016 GO:0008270
Prci2g3206 528 SMART ringv_2 300 349 IPR011016 GO:0008270
Prci2g3206 528 MobiDBLite consensus disorder prediction 137 151 - -
Prci2g3206 528 MobiDBLite consensus disorder prediction 112 154 - -
Prci2g3206 528 SUPERFAMILY RING/U-box 297 352 - -
Prci2g3206 528 MobiDBLite consensus disorder prediction 113 128 - -
Prci2g3206 528 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 356 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3206 Prci-Chr2 40518771 40552725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3206 284 355 C3H Transcription Factor Family AT2G37950 45.205 2.90e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3206 - - qsa:O6P43_014398 577.4