Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3200 ATGACAAATTCAGCCCCGTTGTTCTGGCTCCATGTCCGAGTTGACTTTCTTTTCTTCTTCGTCTTCTTCGTTTTCTGTCTGAACTGTGCAAACTCTCAGTCTGAACTGTATGATCAAGAACATGCAGTTTTGTTGAGGATGAAGCAGTACTTTCAGAACCCGTCTTCCCTCAGTCACTGGACACAATCAGATAATTCATCCCATTGTTCGTGGACAGAGATCACCTGCAACAGTAACTCTGTTACAAGACTGGCTCTGCGAAACATCACCATCACCCACACGGTCCCACCTTTCATCTGTGACCTAAAAAACCTCACTTCCATTGATTTTCAATGGAATTTCATTCCTGGGGAGTTCCCAACGTATCTCTACAGCTGCTCCAAGCTGGAGCACCTGGACCTCTCTAATAATTACTTTGTTGGTAAAGTTCCAGATGACATTGACCGATTGGCTAACCTGCGTTTTCTTAACCTTGGCGGCAACAACTTCTCCGGTGAGATTCCGGCGAGCGTCTGGCGGTTAAAGGACCTGACAAGTCTTCAGCTTAATTCTTGTCTATTTAATGGCACTATTCCGAGTGAAATAGGCAGCTTGTCCAATCTTGAAGTCTTAAATTTGGGCATCAACCCGTTCTCTCCTTCAAAGATTCCGCCTAGCTTCAACAAGCTCACCAAATTGAAGGATATTGAAATGCATGACTGCAACTTGATCGGTGAAATCCCAGAAACTATTGGGGAACTGGTTGCCTTGGAGATGTTGGATTTATCCTCAAATAGTTTAAGCGGGAAAATTCCAAGTGGTTTGTTTATGCTCAAGAATCTTAGCATCCTGTTTCTTTCAAAGAATCAGCTTAATGGTCAGCTACCTCAAGCGATTGAAGCCTTAAACTTGACGATCATTGACCTCATTTGGAACAATCTTACGGGGAAGATACCTGAAGGCTTCGGAAATCTCAGTAAGCTAACTGGTTTGAACTTAGGATGTAATCAATTATCTGGCGAGATTCCAGAAAGCCTAGGCCGTCTTCCATCCATAATAGACTTTAGGGTTTTCATCAACAATTTATCAGGTAATATTCCCCCAGAGTTTGGGCTTCATTCAAATCTTAGAACATTTGAGCTTGCATCAAACAGTTTCACTGGCAGTCTTCCTCAGAACTTGTGTTTCCATGGCAACTTATTTCGATTAACGGCTTATGACAACAAACTTAGTGGGCAATTGCCAGAATCATTGGGAAATTGTCGTAGCCTATTAGAGTTGAAGATATACAATAATGAACTCTCAGGCAAAATTCCTAGCAGCCTCTGGGCATCTCAGAATTTGTCAACTTTCATGATCAATGACAATAAATTCTCAGGTGAGCTTCCTGAAACATTGCCTGTGAATGTTTCACTCATGGCAATTAGTTACAATCAGTTTTCTGGTCCAATTCCAGCAGGAATATCTTCCATGAAGAATCTGGTTGTGTTTAATGCAAGTAGCAACCTCTTTAATGGAAGTATTCCACAAGAGCTAACCAGTCTTTCCAATCTAGCAACTTTGTTGCTTGATCAGAACAGACTTTCTGGCCCATTTCCATCTGAAATTATATCATGGAAATCTCTGAGAACTCTAAACTTGAGCCAAAATCAACTCTCTGGGAAAATCCCAGATTCAATTGGTCATTTGCTTGACCTTACACAACTAGACTTGTCACAAAATCAATTCTCTGGCCAAATTCCATCTCAAATATCCCTTATTAGACCCCCTGATCTCAACCTTTCCTCTAATCAGTTGACTGGGAAAATTCCCAGTGAATTTGAAAATTCTGCTTATGCTACCAGCTTTTTGAACAATTCCGGTCTTTGTGTTGATACGGCTGGACTAAACTTTAACTTGTGCAATTCTGGTTCTGTCCCTCAAAGGTCAAGCAAAGGCTCATCTGTGCCTCTTGCTTTGATCATAGGCCTTGCTATAGTAGCATCCATAGCAATTTTCTTGGTGTCATTTCTGATGATGAGATTCTACCAAAACAGAAAGCAAGAATTGGACACTTCATGGAAGTTGACTTCCTTCCAAAAGCTGAGTTTCACAGAATCAAATATTGTCTCATCCATGACAGACGGTAACATTATAGGCAGAGGAGGGTATGGTACAGTACATCGTATTGCTATCAATGATAAAGACTATGTTGCTGTGAAGAAGATAAGCAATAACAGGAAGTTGCATCAGAAACTTGAAAATGCATTTCTTGCAGAAGTTGAAATCTTGAGCAGTATTCGTCACATTAACATAGTGAAGTTGCTGTGTTGTATATCTAATGAGGATTCTCTACTTCTTGTATATGAGTACTTGGAAAATCATAGTCTCGATAAGTGGCTACATAAGAAGAGTGGCTCATCAGGTGCGTCATCCACCGTTCATAGTTTTATTCTTGACTGGCCAAGGAGATTGCAAATAGCCATTGGGATTGCACAAGGCTTGAGCTACATGCATCATGACAACTCACCACCCATTATTCATCGTGATGTCAAAACAAGCAACATTCTGTTGGATTCTCAGTTCAATGCAAAAGTTGCAGATTTTGGTCTTGCCAAGATGTTGATCCATCCAGGACATCTTGATACCATGTCATCTGTGGTTGGCTCTTTTGGTTATATCGCTCCAGAATATGCTCAAACAAAAAGAGTGAACGAAAAGGTTGATGTTTATAGCTTTGGGGTTATCCTATTGGAACTGACAACTGGAAAAGAAGCCAACTATGGAGATGAACACTCATCTCTTGCAGAATGGGCATGGCGTCATAATCAATTAGGAAGTAGCATAGAACAAATTCTAGACGAAGATGTTAAGGAAACTTCGAACTTGGAGCAAATGTGCAGTGCCTTCAAGCTTGGGGTGATGTGTACAACCAAAGAGCCAGTTGGTAGGCCTTCCATGAAGGAAGTTGTGAATGAACTGCTTCGCTTGAAAGATCCAATTGTTTATGCAGAAATGGGTTTTGGTCATTTCGAGGCTGTTCCCCTACTAAAGAATTCTAAAAGGGATAGTAGGTTGGATATTGAAAATGATAGCTAG 3057 0.4089 MTNSAPLFWLHVRVDFLFFFVFFVFCLNCANSQSELYDQEHAVLLRMKQYFQNPSSLSHWTQSDNSSHCSWTEITCNSNSVTRLALRNITITHTVPPFICDLKNLTSIDFQWNFIPGEFPTYLYSCSKLEHLDLSNNYFVGKVPDDIDRLANLRFLNLGGNNFSGEIPASVWRLKDLTSLQLNSCLFNGTIPSEIGSLSNLEVLNLGINPFSPSKIPPSFNKLTKLKDIEMHDCNLIGEIPETIGELVALEMLDLSSNSLSGKIPSGLFMLKNLSILFLSKNQLNGQLPQAIEALNLTIIDLIWNNLTGKIPEGFGNLSKLTGLNLGCNQLSGEIPESLGRLPSIIDFRVFINNLSGNIPPEFGLHSNLRTFELASNSFTGSLPQNLCFHGNLFRLTAYDNKLSGQLPESLGNCRSLLELKIYNNELSGKIPSSLWASQNLSTFMINDNKFSGELPETLPVNVSLMAISYNQFSGPIPAGISSMKNLVVFNASSNLFNGSIPQELTSLSNLATLLLDQNRLSGPFPSEIISWKSLRTLNLSQNQLSGKIPDSIGHLLDLTQLDLSQNQFSGQIPSQISLIRPPDLNLSSNQLTGKIPSEFENSAYATSFLNNSGLCVDTAGLNFNLCNSGSVPQRSSKGSSVPLALIIGLAIVASIAIFLVSFLMMRFYQNRKQELDTSWKLTSFQKLSFTESNIVSSMTDGNIIGRGGYGTVHRIAINDKDYVAVKKISNNRKLHQKLENAFLAEVEILSSIRHINIVKLLCCISNEDSLLLVYEYLENHSLDKWLHKKSGSSGASSTVHSFILDWPRRLQIAIGIAQGLSYMHHDNSPPIIHRDVKTSNILLDSQFNAKVADFGLAKMLIHPGHLDTMSSVVGSFGYIAPEYAQTKRVNEKVDVYSFGVILLELTTGKEANYGDEHSSLAEWAWRHNQLGSSIEQILDEDVKETSNLEQMCSAFKLGVMCTTKEPVGRPSMKEVVNELLRLKDPIVYAEMGFGHFEAVPLLKNSKRDSRLDIENDS 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3200 1018 Gene3D Ribonuclease Inhibitor 350 622 IPR032675 -
Prci2g3200 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 293 387 - -
Prci2g3200 1018 FunFam Receptor-like protein kinase HSL1 679 777 - -
Prci2g3200 1018 Gene3D Transferase(Phosphotransferase) domain 1 778 990 - -
Prci2g3200 1018 SUPERFAMILY L domain-like 215 609 - -
Prci2g3200 1018 PANTHER UNNAMED PRODUCT 296 912 - -
Prci2g3200 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Prci2g3200 1018 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Prci2g3200 1018 Pfam Protein kinase domain 701 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3200 1018 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 194 292 - -
Prci2g3200 1018 FunFam Kinase family with leucine-rich repeat domain-containing protein 778 992 - -
Prci2g3200 1018 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 390 630 - -
Prci2g3200 1018 Gene3D Ribonuclease Inhibitor 37 211 IPR032675 -
Prci2g3200 1018 Gene3D Ribonuclease Inhibitor 212 349 IPR032675 -
Prci2g3200 1018 SUPERFAMILY Protein kinase-like (PK-like) 686 980 IPR011009 -
Prci2g3200 1018 SMART serkin_6 699 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3200 1018 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Prci2g3200 1018 Pfam Leucine rich repeat 531 569 IPR001611 GO:0005515
Prci2g3200 1018 ProSitePatterns Protein kinases ATP-binding region signature. 705 728 IPR017441 GO:0005524
Prci2g3200 1018 SUPERFAMILY L domain-like 38 294 - -
Prci2g3200 1018 ProSiteProfiles Protein kinase domain profile. 699 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3200 1018 Gene3D Phosphorylase Kinase; domain 1 669 777 - -
Prci2g3200 1018 SMART LRR_typ_2 198 222 IPR003591 -
Prci2g3200 1018 SMART LRR_typ_2 150 174 IPR003591 -
Prci2g3200 1018 SMART LRR_typ_2 318 342 IPR003591 -
Prci2g3200 1018 SMART LRR_typ_2 247 271 IPR003591 -
Prci2g3200 1018 SMART LRR_typ_2 532 556 IPR003591 -
Prci2g3200 1018 FunFam Receptor-like protein kinase HSL1 isoform A 37 189 - -
Prci2g3200 1018 ProSiteProfiles Leucine-rich repeat profile. 534 556 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3200 Prci-Chr2 40487611 40491345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3200 40 1017 Receptor kinase-like Gene Family AT5G25930 49.899 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci2g3200 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3200 - - qsa:O6P43_007862 1257.66