Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3150 ATGAATTCTCACCCTTCCGTCCGACGAATTTCAGAATGCTTCATCAAGCCACCCCTTCCTCTCAATCATCCTGACCGCATCATCTGCTATTTAAGCCCCTTGGATCTTGCTATGTTGTCTGCTCACTACATCCAGAAAGGCCTCCTCTTCCTCAAGCCTTCTCCTCCTAATCATCCCCATTTCATCGATACTCTTCTCCGCCGCCTCAAGCACTCCCTTTCTCTCTCCGTCCTCCATTTCTATCCCCTTGCCGGCCGTCTAGTGACCACGCCTCTTCCCTCCTACTCCGTCTTCGTCGATTGCCACAACAGCCAGGGAGCAAAATTTATCTGCGCCACTCTTGACATGACCGTCTCCGACATCCTCTACCCCGTCGATGTCCCCTCCGTTGTCCAGTCCTTCTTTGACCATGACAGGGCGGTCAACCACGACGGTCACACCTTACCTTTGCTGTCCGTTCAGGTCACCGAATTGATAGACGGCGTTTTCATCGGCTGTTCCATGAACCATTGCCTCGCCGACGGCACTTCCTATTGGAGATTCTTCAAAGCGTGGGCCGAAATCTTTGGAGCACTGGAAGGTGATAGATACAACAACGGCGATGATGTTTGTATTCCCATCTCACACCCGCCGATTCACAATCGCTGGTTCCCAGAGGGCTGTGGTCCCCTCATCAATCTTCCCTTCAGACATCACGACGAGTTCATAAGCAGATTCGAAGCACCGCGTCTGAGAGAGAGAATATTCCATTTCACGGCAGAGTCTATTGCGAAACTGAAAGCAAAGGCCAACCAAGAGTCCAACACCACCAAGATATCGTCCTTCCAATCATTATCGGCACTCGTATGGAGGTGCATAACAAGGGCGCGGAGTCTCCCCAGTGATCAGAGAACAAGCTGTAAGTTGGCGGCAAATAACAGATCAAGAATGGACCCTCCTCTTCCGGAGGAGTACTTCGGGAACTCGATCCACGCGGTAACAGCAGAAACGACGTCGGGGGAGTTGCTAGAGCACGGCCTTGGATGGGCGGCGTGGAAGATACATGTGGCCGTTGCGAACCACGACGACAAAATAGTGCGTGAGTTTGTGACGAAGTGGTTGGAGAGTCCGATGGTGTATCAACTGGGTCGGTTCGTTGACCCGTACGGTGTGATGATGGGGAGCTCACCAAGATTCGACATGTATGGGAATGAATTCGGAATGGGAAAAGCGTTGGGTGTTCGAAGTGGGTATGCAAACAAGTTTAATGGCAAAGTGACGTCGTATCCTGGTCGTGAAGGAGGGGGAAGCGTAGACCTGGAAATCTGTCTTCCCCCGGAGTTGATGACCGCTCTCGAATCCGATCACGAATTCATGAATTCTCTGTAA 1368 0.5175 MNSHPSVRRISECFIKPPLPLNHPDRIICYLSPLDLAMLSAHYIQKGLLFLKPSPPNHPHFIDTLLRRLKHSLSLSVLHFYPLAGRLVTTPLPSYSVFVDCHNSQGAKFICATLDMTVSDILYPVDVPSVVQSFFDHDRAVNHDGHTLPLLSVQVTELIDGVFIGCSMNHCLADGTSYWRFFKAWAEIFGALEGDRYNNGDDVCIPISHPPIHNRWFPEGCGPLINLPFRHHDEFISRFEAPRLRERIFHFTAESIAKLKAKANQESNTTKISSFQSLSALVWRCITRARSLPSDQRTSCKLAANNRSRMDPPLPEEYFGNSIHAVTAETTSGELLEHGLGWAAWKIHVAVANHDDKIVREFVTKWLESPMVYQLGRFVDPYGVMMGSSPRFDMYGNEFGMGKALGVRSGYANKFNGKVTSYPGREGGGSVDLEICLPPELMTALESDHEFMNSL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3150 455 Gene3D - 234 447 IPR023213 -
Prci2g3150 455 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 453 - -
Prci2g3150 455 Pfam Transferase family 10 452 - -
Prci2g3150 455 Gene3D - 2 221 IPR023213 -
Prci2g3150 455 FunFam Tryptamine hydroxycinnamoyl transferase 231 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3150 Prci-Chr2 39882675 39884479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3150 69 446 Monolignol Biosynthesis Gene Families AT5G48930 28.713 1.18e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3150 - - gmx:100787228 677.167