Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3130 ATGGAAATAGAGCAAGACATTGCTGTGGCCCCCTGCAGTGGAGGCAGAAGTACTGAGAGAGGACTGTATCTGGTGTGGGAAGATTTAGCTGTGGTAGTTCCAAACTTCGGCAAGGGACATACCAAGAGGCTGCTTGATAGGTTGAGTGGATATGCTGAGCCTAACAGAATCATGGCCATCATGGGACCTTCTGGTTCTGGCAAATCCACTCTTCTTGATGCTTTGGCAGGTAGGCTTCCTGGAAATGTTGTCATGACTGGGAATGTGCTAGTAAATGGAAAGAAGAGAGGAGACCATGGAGTTAAAGCTTATGTGACCCAAGAAGACATATTGTTGGGAACACTAACAGTGAGGGAAACAATATCTTACTCAGCAAAACTAAGACTTCCAAGCACCATGACAAAAGAAGAGGTGAATGACATAGTGGAGGGAACAATTCTGGAACTGGGTCTTGAACAATGTGCTGATAGGCCAATCGGGAATTGGCATTTAAGAGGTATAAGTGGTGGGGAAAAGAAAAGACTAAGCATAGCACTTGAGATCCTCACAAGACCTTCCCTCTTGTTTCTTGATGAACCTACCAGTGGGCTAGATAGTGCCTCGGCATTTTTTGTTGTTCAAACCCTGAGAAATATTGCTCATGATGGAAAAACTGTTATCTCCTCCATTCATCAACCAAGCAGTGAGGTCTTTGCACTCTTTGATGATCTTTTCTTGCTCTCTGGTGGTCAAACTGTGTTTTTTGGAGCAGCCAAAATGGCAGTTGAGTTCTTTGCCAAAGCAGGATTTCCATGTCCAAGTAGAAGAAATCCATCAGATCACTTCCTTCGTTGTATTAATGCAGATTTTGACAGAATCACAATGACCATGATGGCATCTCAGAAAATACCTGAACAAGATAATCTATCAACTGGAGAAATCAAAGAAATACTTGTTGAGAAATACCAATGGTCAGAATATGCTGCCACAGCAAGATCAAGAATAAAAGAAATCTCAAAAACTGGACAAAAAGAGAGTGAAAGTAAAAGCAAGGACCAAGCCAAATGGTGGAAGCAGCTGTCAACATTGACTCAGAGATCTTTTGTGAACATGTGTAGAGATGCTGGATACTACTGGATAAGGATAATAATCTACGTGGGCTTATCTTTGTGTGTTGGAACTGTCTTTTTCGATGTTGGAACAAGTTATAGGGCAATTTTCGCCAGAGGATCTTGTGGTGCATTCATATCTGGTTTCATGACATTCATGTCCATTGGAGGCTTCCCATCTTTCATAGAAGAGATGAAGGTGTTTAAGAAAGAAAGGCTCAATGGTTATTACGGCAATGCAGTCTATGTTCTGTCAAACTTTCTGTCTTCTCTTCCTTTTGTGTTCGCCATGTCTTTCGCTACTGGGATTATAACCTTCTATATGGTTAAGCTTCATCCTGGCTTTTCTCTTCTTCTGTATGGATGCATCGATCTTTGTTGCTGTATTGCTGTTGTGGAGACTGCAATGATGATTATAGCTTCACTCGTTCCTAACTTCCTAATGGGAGTCATAGTTGGAGCAGGATATGTTGGTGTCATGATGATGACTTCTGGATACTTCCGTCTACGTCCTGACCTTCCCAAAGTCTTCTGGCGTTATCCAATCTTATACCTCAATTTTGGAGCTTGGGGATTACAGGGTGCTTACAAGAACGACATGATGGGGTTGGAGTTTGATGGAATGAATCCTGGAGACCCAAAAATAAAAGGAGAATTCATCCTGAGAACCGTGCTTGGCCTTCAAGTTGATCATTCAAAATGGTGGGACTTAGCTGCAGTGGCACTCATTCTCATATCCTTCAGACTTTTTCTCTTCCTCCTTTTAAAGTTCAGAGAGTTCTCTTCACCTCTGCTTCGTGAAATCTACACAAAGCAGACTCTGCAACGCATCAAGAAGCGTCCTTCTTTCAGAAAAGCTGCATCATCTTTGTCCTTCCCTTCCAAGAGACACCAGCATCCCTTGTCTTCTCAAGAAGGTCTCACCTCCCCAATTCATTAG 2028 0.4246 MEIEQDIAVAPCSGGRSTERGLYLVWEDLAVVVPNFGKGHTKRLLDRLSGYAEPNRIMAIMGPSGSGKSTLLDALAGRLPGNVVMTGNVLVNGKKRGDHGVKAYVTQEDILLGTLTVRETISYSAKLRLPSTMTKEEVNDIVEGTILELGLEQCADRPIGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAFFVVQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTVFFGAAKMAVEFFAKAGFPCPSRRNPSDHFLRCINADFDRITMTMMASQKIPEQDNLSTGEIKEILVEKYQWSEYAATARSRIKEISKTGQKESESKSKDQAKWWKQLSTLTQRSFVNMCRDAGYYWIRIIIYVGLSLCVGTVFFDVGTSYRAIFARGSCGAFISGFMTFMSIGGFPSFIEEMKVFKKERLNGYYGNAVYVLSNFLSSLPFVFAMSFATGIITFYMVKLHPGFSLLLYGCIDLCCCIAVVETAMMIIASLVPNFLMGVIVGAGYVGVMMMTSGYFRLRPDLPKVFWRYPILYLNFGAWGLQGAYKNDMMGLEFDGMNPGDPKIKGEFILRTVLGLQVDHSKWWDLAAVALILISFRLFLFLLLKFREFSSPLLREIYTKQTLQRIKKRPSFRKAASSLSFPSKRHQHPLSSQEGLTSPIH 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3130 675 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 267 IPR003439 GO:0005524
Prci2g3130 675 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 18 643 - -
Prci2g3130 675 SMART AAA_5 54 243 IPR003593 GO:0016887
Prci2g3130 675 MobiDBLite consensus disorder prediction 651 675 - -
Prci2g3130 675 FunFam ABC transporter G family member 11 18 261 - -
Prci2g3130 675 CDD ABCG_EPDR 21 249 - -
Prci2g3130 675 Gene3D - 36 260 IPR027417 -
Prci2g3130 675 ProSitePatterns ABC transporters family signature. 167 181 IPR017871 GO:0005524|GO:0016887
Prci2g3130 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 256 IPR027417 -
Prci2g3130 675 Pfam ABC-2 type transporter 352 561 IPR013525 GO:0016020|GO:0140359
Prci2g3130 675 Pfam ABC transporter 45 195 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3130 Prci-Chr2 39520072 39528149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3130 56 238 Calmodulin-binding Proteins AT2G36910 30.198 4.92e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3130 K05681 - gmx:100806806 1017.68