Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3129 ATGGAGATAGAAGATGCGAGTGGTGGAGGGAGCAATAGAGGACGGAGATATAATGAGAGCAACGGATTCGGCGCTTCATCGACCATCGAGGCTTCCACGGCGGTGGTGTACGGTGGACTCGACAGAGGAAGCTGTTTGGTGTGGGAGGATCTGACGGTGGTGCTTCCCAACTTCGGCAAGGGACCAACCAAGAGGTTGCTTAATGGCCTTCATGGCTACGCCGAGCCTGGTCGAATCATGGCTATTATGGGTCCTTCTGGTTCAGGGAAATCTACCTTGCTCGATTCACTTGCAGGGAGACTGTCAAAAAATGTGGTCATGACTGGAAATATATTTCTCAATGGAAAGAAGAAAAGACTGGATTATGGTGATGTTGCTTATGTAACACAAGAGGATGTCTTGCTGGGAACTCTCACAGTCAGAGAAACCATATCTTATTCAGCACATCTACGTCTTCCGACAACAATGACCAAAGAAGAAGTTGATGGGATCGTTGATGGAACAATCATTGAAATGGGTCTCCAAGATTGTGCAGATAGGTTGATTGGTAACTGGCACTTGAGAGGCATCAGTGGAGGGGAAAAGAAAAGACTCAGTATTGCGCTTGAAATCCTCACAAGGCCTCGCTTATTGTTTCTTGATGAACCCACCAGTGGCCTTGATAGTGCCTCTGCTTTCTTTGTTGTTCAAACTCTTAGAACTGTTGCTCGTGATGGACGGACAGTAATCTCTTCAATTCACCAGCCAAGTAGTGAAGTGTTTGCTCTCTTTGATGACCTTTTCTTACTATCTGGTGGTGAAACAGTGTATTTTGGGGAAGCAAAGATGGCTGTAGAGTTCTTTGCAGAAGCAGGATTTCCATGTCCGCACAAAAGAAACCCCTCTGATCATTTCTTACGTTGCATCAATTCTGACTTCGACATTGTAACTGCCACTTTGAAGGGATCGCAAAGAATCGGGGATATTCCAAATTCAGCAGATCCTTTCATGAACATGGCTACAGCAGAGATTAAAGCTATGCTAGTTGAAAAATATAGGCGTTCAGTTTATGCTAGAAGGACAAAAGAAAGGACTCTAGAACTTTCCAACATTGATGGAATAGAAGCCGAAACACAAACTGGTAGTCAAGCTAGTTGGTGGAAACAACTTGTAACGTTGACAACAAGATCATTTGTGAACATGAGCAGAGATGTGGGTTACTACTGGTTAAGGATTATAATATATGTCATAGTTTCTATATGTGTGGGAACTATTTACTTTGATGTTGGGTATAGCTACACTTCAATCTTGGCTCGCGGGGCATGTGGTGGATTTATTTCAGGGTTTATGACATTTATGTCAATAGGAGGCTTTCCATCATTTATTGAAGAAATCAAGGTTTTCCATCGGGAAAGGCTTAATGGATATTACGGAGTTGCAGTATATATTTTATCCAATTTCCTTTCTTCTCTCCCATTCTTGGCTGCAGTTGCTCTAACTACTAGCACCATTACTTATAACATGGTGAAATTCCGGCCGGGCTTTATTCACTTTTTGTTCTTCACTCTCAACATCTTTGGTTGCATAACTGTAATAGAGAGCCTCATGATGGTCGTAGCTTCACTCGTTCCTAATTTCCTTATGGGAATAATTGCTGGGGCTGGAATAATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTTCTAGATGATCTTCCAAAGCCAGTTTGGCGCTACCCGATATCATATCTTAGTTATGGTGCCTGGGCAGTACAGGGTTCCTACAAGAATGACTTGCTTGGGCTCGAGTTTGAGCCTATGTTACCAGGTGACCCAAAATTGAAGGGTGATTATATCATCACGCACATGTTGGGCATGCCACTAGATCATTCCAAGTGGTGGGACTTGGGAGCTCTTTATATCACTCTTTTGGGTTACAGAATTCTTTTCTTTATTGTTATCAAGTTCAAGGAGAGAGCTTCCCCAATGTTTCAGAGACTCCATGCCAAGAGAACATTACAAGCACTTGAAAAGAGGCCTTCTTTCAGGAAAATGGCACCTTTTTCTTCAAAGAGACATCAGGCCCTCCATTCGCTGTCTTCTCAAGAAGGTCTTAATTCTCCACTCCACTAG 2115 0.4307 MEIEDASGGGSNRGRRYNESNGFGASSTIEASTAVVYGGLDRGSCLVWEDLTVVLPNFGKGPTKRLLNGLHGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNIFLNGKKKRLDYGDVAYVTQEDVLLGTLTVRETISYSAHLRLPTTMTKEEVDGIVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRTVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPHKRNPSDHFLRCINSDFDIVTATLKGSQRIGDIPNSADPFMNMATAEIKAMLVEKYRRSVYARRTKERTLELSNIDGIEAETQTGSQASWWKQLVTLTTRSFVNMSRDVGYYWLRIIIYVIVSICVGTIYFDVGYSYTSILARGACGGFISGFMTFMSIGGFPSFIEEIKVFHRERLNGYYGVAVYILSNFLSSLPFLAAVALTTSTITYNMVKFRPGFIHFLFFTLNIFGCITVIESLMMVVASLVPNFLMGIIAGAGIIGIMMMTSGFFRFLDDLPKPVWRYPISYLSYGAWAVQGSYKNDLLGLEFEPMLPGDPKLKGDYIITHMLGMPLDHSKWWDLGALYITLLGYRILFFIVIKFKERASPMFQRLHAKRTLQALEKRPSFRKMAPFSSKRHQALHSLSSQEGLNSPLH 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3129 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 279 IPR027417 -
Prci2g3129 704 CDD ABCG_EPDR 46 272 - -
Prci2g3129 704 Gene3D - 41 285 IPR027417 -
Prci2g3129 704 MobiDBLite consensus disorder prediction 1 22 - -
Prci2g3129 704 FunFam ABC transporter G family member 11 40 284 - -
Prci2g3129 704 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524|GO:0016887
Prci2g3129 704 Pfam ABC-2 type transporter 247 303 IPR043926 GO:0140359
Prci2g3129 704 Pfam ABC transporter 68 218 IPR003439 GO:0005524
Prci2g3129 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 290 IPR003439 GO:0005524
Prci2g3129 704 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 41 673 - -
Prci2g3129 704 SMART AAA_5 76 247 IPR003593 GO:0016887
Prci2g3129 704 Pfam ABC-2 type transporter 382 591 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3129 Prci-Chr2 39480312 39489750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3129 62 259 Calmodulin-binding Proteins AT2G36910 30.476 1.12e-11 66.6