Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3124 ATGATGTCACTTTCGCCTAGCTTAGGATCTCCATACCCTTGGCTTCGAGAGCTTAAATCCGAGGAGAGGGGCTTGTACTTAATCCATTTGTTGCTCACTTGTACAAATCATGTAGCTTCTGGTAGTCTTGAAAATGCAAATATGGCTCTTGAACAAATTTCCCATCTTGCTTCCCCGGATGGTGATACTATGCAGCGAATTGCTGCCTATTTTACTGAAGCACTTGCTGATCGGATACTTAAAACATGGCCTGGTCTCCACAAGGCCCTCAATTCTACAAGACTAGTCATGGTTTCTGAAGAAATTATGGTCCGGAAGCTGTTCTTTGAGCTGTTCCCATTCTTGAAGGCAGCATTCGTGCTCACAAATCAGGCTATCATGGAAGCAATGGAAGGGGAGAAGATGGTTCATATAATTGATCTCAATGCTGCTGAACCTGCACAGTGGATTGCACTTCTCCAAGTTTTGAGTGCTCGGCCCGAAGGCCCTCCTCACTTGAGAATTACTGGGGTTCATCAACAGAAAGAGATTCTGGATCAGATGGCTCATAGGCTGATTGAAGAAGCAGAAAAGTTGGACATCCCATTCCAGTTCAATCCTGTTGTGAGCAAGCTAGAGAATCTTGATTTCAACAAACTTCGTGTCAAGACTGGAGAAGCACTAGCTATCAGTTCTATTCTCCAATTACATTCACTTTTGACCTTGGACGATGAAGCTTTGCGCAGAAGAACTCCTCTCGTAAAAAAATGCTCCAATGGAAGCCATCTACGAAGAGCCGTGCCAATGAACCAAAGCTCATTAGGTGATTTGCTTGAGAAGGATATGATCAATAATAGCTACAGCCCAAGTCCTGACTCGGCCTCATCATCCCCAGCATCATCGATTGCTTCAATGAGTATGGAGAGCCTTCTCAATGCCTTGTGGGGTTTGTCGCCCAAAGTCATGGTTGTGACAGAGCAAGACTCTAATCACAATGGTTCAACTCTAATGGAGAGGCTATTGGAAGCTCTGTATTCTTACGCAGCATTATTTGATTGTCTGGAATCAACAGTCTCAAGAACATCAATGGAGAGATTAAAGGTGGAGAAGATGCTTTTCGGTGAGGAAATCAAGAACATAGTTGCGTGTGAGGGAGCTGAAAGAAAGGAAAGGCATGAAAAGCTTGACAAGTGGCTACAGAGGCTTGATCTAGCCGGGTTTGGGAATGTACCTTTAAGCTATTATGGGATGCTACAAGCAAGGAGGTTACTGCAGAGCTATGGTTGTGAGGGATACAAAATGAGGGAGGAAAATGGCTGTGTTGTGATTTGCTGGCAGGATAGGTCACTTTTTTCAGTATCAGCATGGAGACCTAGGAAGTAG 1362 0.4435 MMSLSPSLGSPYPWLRELKSEERGLYLIHLLLTCTNHVASGSLENANMALEQISHLASPDGDTMQRIAAYFTEALADRILKTWPGLHKALNSTRLVMVSEEIMVRKLFFELFPFLKAAFVLTNQAIMEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQQKEILDQMAHRLIEEAEKLDIPFQFNPVVSKLENLDFNKLRVKTGEALAISSILQLHSLLTLDDEALRRRTPLVKKCSNGSHLRRAVPMNQSSLGDLLEKDMINNSYSPSPDSASSSPASSIASMSMESLLNALWGLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSMERLKVEKMLFGEEIKNIVACEGAERKERHEKLDKWLQRLDLAGFGNVPLSYYGMLQARRLLQSYGCEGYKMREENGCVVICWQDRSLFSVSAWRPRK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3124 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 446 IPR005202 -
Prci2g3124 453 Pfam GRAS domain family 27 450 IPR005202 -
Prci2g3124 453 ProSiteProfiles GRAS family profile. 18 450 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3124 Prci-Chr2 39446226 39448815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3124 2 453 GRAS Transcription Factor Family AT1G50420 70.870 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci2g3124 GRAS 1.1e-140 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3124 - - tcc:18589932 747.273