Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3123 ATGTTTCAAGATGAAGGGTCGTCTTCTGTAACTTCATCACCTTTTCAGTTCTTCTCTATGATGTCACTTTCGCCTAGCTTAGGATCTCCATACCCTTGGCTTCGAGAGCTTAAATCCGAGGAGAGGGGCTTGTACTTAATCCATTTGTTGCTCACTTGTACAAATCATGTAGCTTCTGGTAGTCTTGAAAATGCAAATATGGCTCTTGAACAAATTTCCCATCTTGCTTCCCCGGATGGTGATACTATGCAGCGAATTGCTGCCTATTTTACTGAAGCACTTGCTGATCGGATACTTAAAACATGGCCTGGTCTCCACAAGGCCCTCAATTCTACAAGACTAGTCATGGTTTCTGAAGAAATTATGGTCCGGAAGCTGTTCTTTGAGCTGTTCCCATTCTTGAAGGCAGCATTCGTGCTCACAAATCAGGCTATCATGGAAGCAATGGAAGGGGAGAAGATGGTTCATATAATTGATCTCAATGCTGCTGAACCTGCACAGTGGATTGCACTTCTCCAAGTTTTGAGTGCTCGGCCCGAAGGCCCTCCTCACTTGAGAATTACTGGGGTTCATCAACAGAAAGAGATTCTGGATCAGATGGCTCATAGGCTGATTGAAGAAGCAGAAAAGTTGGACATCCCATTCCAGTTCAATCCTGTTGTGAGCAAGCTAGAGAATCTTGATTTCAACAAACTTCGTGTCAAGACTGGAGAAGCACTAGCTATCAGTTCTATTCTCCAATTACATTCACTTTTGACCTTGGACGATGAAGCTTTGCGCAGAAGAACTCCTCTCGTAAAAAAATGCTCCAATGGAAGCCATCTACGAAGAGCCGTGCCAATGAACCAAAGCTCATTAGGTGATTTGCTTGAGAAGGATATGATCAATAATAGCTACAGCCCAAGTCCTGACTCGGCCTCATCATCCCCAGCATCATCGATTGCTTCAATGAGTATGGAGAGCCTTCTCAATGCCTTGTGGGGTTTGTCGCCCAAAGTCATGGTTGTGACAGAGCAAGACTCTAATCACAATGGTTCAACTCTAATGGAGAGGCTATTGGAAGCTCTGTATTCTTACGCAGCATTATTTGATTGTCTGGAATCAACAGTCTCAAGAACATCAATGGAGAGATTAAAGGTGGAGAAGATGCTTTTCGGTGAGGAAATCAAGAACATAGTTGCGTGTGAGGGAGCTGAAAGAAAGGAAAGGCATGAAAAGCTTGACAAGTGGCTACAGAGGCTTGATCTAGCCGGGTTTGGGAATGTACCTTTAAGCTATTATGGGATGCTACAAGCAAGGAGGTTACTGCAGAGCTATGGTTGTGAGGGATACAAAATGAGGGAGGAAAATGGCTGTGTTGTGATTTGCTGGCAGGATAGGTCACTTTTTTCAGTATCAGCATGGAGACCTAGGAAGTAG 1419 0.4412 MFQDEGSSSVTSSPFQFFSMMSLSPSLGSPYPWLRELKSEERGLYLIHLLLTCTNHVASGSLENANMALEQISHLASPDGDTMQRIAAYFTEALADRILKTWPGLHKALNSTRLVMVSEEIMVRKLFFELFPFLKAAFVLTNQAIMEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQQKEILDQMAHRLIEEAEKLDIPFQFNPVVSKLENLDFNKLRVKTGEALAISSILQLHSLLTLDDEALRRRTPLVKKCSNGSHLRRAVPMNQSSLGDLLEKDMINNSYSPSPDSASSSPASSIASMSMESLLNALWGLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSMERLKVEKMLFGEEIKNIVACEGAERKERHEKLDKWLQRLDLAGFGNVPLSYYGMLQARRLLQSYGCEGYKMREENGCVVICWQDRSLFSVSAWRPRK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3123 472 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 465 IPR005202 -
Prci2g3123 472 Pfam GRAS domain family 46 469 IPR005202 -
Prci2g3123 472 ProSiteProfiles GRAS family profile. 37 469 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3123 Prci-Chr2 39446226 39448816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3123 1 472 GRAS Transcription Factor Family AT1G50420 70.686 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci2g3123 GRAS 1.3e-140 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3123 - - cave:132164091 759.599