Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3102 ATGGCACCACCATCAGCTCTTTTGTTCAAAGTTCGTCGGCGTCAGCCGGAGATGGTGGCTCCTGCAAAGGCGACACCGCGTGAGGTGAAGAATTTGTCAGACATCGACGACCAAGGGAGCCTTCGGTTCCAAATTCCGGTGATCCAGTTCTATCGGAACAATCCTTCGATGAGAGGACGAGATCCAGTTGAGGTGATCAGAAAAGCTTTGGCCGAGACTCTGGTGTTCTACTATCCCTTCGCCGGCAGGCTCCAGGAAGGGCCTAACCGAAAGCTCATGGTGGACTGTAACGGCGACGGCGTCGTTTTCATCGAAGCTGATGCTGACGTCACCCTGGAGGAATTTGGAGATCTTCAGCCTCCATTTCCATGCTTTGAAGAGCTTCTTTACGATGTGCCTGGAACTTCAGATATTCTTGACACCCCACTTCTCCTTATTCAGGTAACGCGCTTGAAATGCGGTGGTTTTATTTTCGCTCTACGCTTGAACCACACTATGAGTGACGCTGCTGGCCTAGCACAATTTATGAGCGCGTTAGGAGAAATTGCTCGCGGTGCGCATCGGCCTCTGACTCCGCCGGTCTGGCATCGTGAGCTTTTAACGGCAAGAGACCCACCACATGTAACATGCATGCATGGTGAGTACGAAGATGTCTCTGGTACTGAAGAAACCGTAATCATCCCATTCGATACAATGGTTCATCGTTCTTTCTTCTTTGGACCCAATGAAGTTGCTTCAATTCGCAATCAAATCCCTTATCATCTTCTTCAATCTTCTAATTTTGAAATCATCACTGCGTTCTTATGGCGGTGTCGTACTGTAGCTCTGCAACCTAACGATGATGATAAAGTCCGTATTATCTGTGCTGTGAATGCTCGTGCCAAATTCAACCCTCCGTTGCCGGACGGTTATTACGGCAATGCCTTCGCCTTTCCGATGGCAGTAACCACCGCCGGGAAACTCCGGAGGAGCCCATTGGGATATGCTTTAGAGTTGGTGAAGAAAGTGAAAGGTGATATGACTGAGGAATACATGCACTCTTTGGCAGATTTCATGGCGATAAATGGACGGCCTCCTTTCAAGGAGGTGGGATCGTACTTGGTGTCGGACGCGACACGAGCCGGATTCCGCGATGTTGATTTCGGGTGGGGAAAGGCTGTGTATGGTGGTCCGGCGAGAGCAGTCAAGGTGGCGAGCTTTTACATGCCTTTTAAGAATGCTCAAGGACAAGAAGGTTTAGTGATACCTTTATGTTTACCTGGTGAAGCCATGGAGAGATTTGTGAAGGAGTTAGATAGAATGCTCAAAACAAGATTGATCACTTCTTCCTTATAA 1335 0.4884 MAPPSALLFKVRRRQPEMVAPAKATPREVKNLSDIDDQGSLRFQIPVIQFYRNNPSMRGRDPVEVIRKALAETLVFYYPFAGRLQEGPNRKLMVDCNGDGVVFIEADADVTLEEFGDLQPPFPCFEELLYDVPGTSDILDTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLAQFMSALGEIARGAHRPLTPPVWHRELLTARDPPHVTCMHGEYEDVSGTEETVIIPFDTMVHRSFFFGPNEVASIRNQIPYHLLQSSNFEIITAFLWRCRTVALQPNDDDKVRIICAVNARAKFNPPLPDGYYGNAFAFPMAVTTAGKLRRSPLGYALELVKKVKGDMTEEYMHSLADFMAINGRPPFKEVGSYLVSDATRAGFRDVDFGWGKAVYGGPARAVKVASFYMPFKNAQGQEGLVIPLCLPGEAMERFVKELDRMLKTRLITSSL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3102 444 Gene3D - 9 217 IPR023213 -
Prci2g3102 444 FunFam Spermidine hydroxycinnamoyl transferase 9 215 - -
Prci2g3102 444 Pfam Transferase family 10 432 - -
Prci2g3102 444 PANTHER ACYL TRANSFERASE 4 9 435 - -
Prci2g3102 444 Gene3D - 223 431 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3102 Prci-Chr2 39114132 39117849 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3102 10 431 Monolignol Biosynthesis Gene Families AT5G48930 28.959 4.62e-51 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3102 K19861 - gmx:100797017 645.58