Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3100 ATGGAGGTCATCAGAGAGCAAAGATTTGTGACGCCTAATCATTTCTCTCAATTCTTTTCCAACTACTCAAAACATGATGATTACTTCAATTCTTTTCCACCTGGATATCGATTCCACCCTACAGAGGAAGAACTCATCATCTTCTATCTCATGAAGAAAATCATGAATGAGCCCTTGCCACCAAATCAGATGCTTGAAGTGGATGTATATCAGCATGACCCTCAAATTCTTTGTCGAAGGTACAAGAGTGCTTGTGAAAAAGAATGGTACTTTTTCTCACCAAGGGAAAGAAAGTATCCAAATGGAGTGAGACCAAAGAGGTCAACAAAAGATGGGTATTGGAAGGTTTCAGGATCAGATAGATTGATTTATTCAAAAGGAATGATTGTTGGAAAATGGAATACGTTGGTTTATTATAGAGGCAAGGCTCCTACAGGAACGAAGACGAATTGGATCATGCGTGAGTATAAACTTGCTCAACATTCTCACAAGAGAACCGGTGCTTTTGACATGATGCTAGAGAATATTAAGCCACAGCCAACACTTTCAGTAAAGTTTTTGACTGCAGCTAAATGA 576 0.3889 MEVIREQRFVTPNHFSQFFSNYSKHDDYFNSFPPGYRFHPTEEELIIFYLMKKIMNEPLPPNQMLEVDVYQHDPQILCRRYKSACEKEWYFFSPRERKYPNGVRPKRSTKDGYWKVSGSDRLIYSKGMIVGKWNTLVYYRGKAPTGTKTNWIMREYKLAQHSHKRTGAFDMMLENIKPQPTLSVKFLTAAK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3100 191 ProSiteProfiles NAC domain profile. 32 179 IPR003441 GO:0003677|GO:0006355
Prci2g3100 191 Pfam No apical meristem (NAM) protein 33 158 IPR003441 GO:0003677|GO:0006355
Prci2g3100 191 SUPERFAMILY NAC domain 28 165 IPR036093 GO:0003677|GO:0006355
Prci2g3100 191 Gene3D NAC domain 41 180 IPR036093 GO:0003677|GO:0006355
Prci2g3100 191 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 32 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3100 Prci-Chr2 38989889 38993034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3100 30 171 NAC Transcription Factor Family AT1G69490 49.655 2.42e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci2g3100 NAM 2.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3100 - - pcin:129302745 408.683