LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g3092	ATGGAGCACGACTTGAAGAAGATACCAAGTCCTTCAAAGGGTTTATTGAGAAGTGAAGAATTATATGAGTATATTCTGGAGACTAGTGTGTACCCGCGTGAGCCAGAGCCTCTCAAGGAGCTAAGGCGTGCCACTGCTAATCACCCAAAGGCACTGATGGCTACTGCACCAGATGCTGGTCAACTGATTTCCATGCTTCTGCAGCTACTCAATGCAAAAAAGACTATTGAAGTCGGAGTCTTCACTGGATACTCTCTTCTACTCACTGCTCTTTCAATTCCAGATGATGGAAAGATAACAGCAATAGACGTGAATTGTGAGTCATATGAGATTGGATTACCAATCATTAGAAAAGCTGGTGTTGAGCACAAGATAGATTTTGTTGAGTCTGAGGCTTTGCCGGCTTTAGATCAGCTCTTGAAAGATCATGCCAACGAAGGGAGCTTTGACTTTGCATTTGTTGATGCTGACAAAGTGAATTACTGGAATTACCATGAAAGACTAATGAAATTGGTGAAGGTTGGTGGCGTAGTGGTTTATGACAACACACTGTGGGGAGGATCTGTAGCAATGAGTGAAGAGGACGCTCCAGAATTCAGAAAACAAGGTAGGCAACTGACTATTGAATTCAACAAATTAATCTCAGCCGATACTCGAATACATGTTTCACTTGCTCCGTTTGGTGATGGCATCACCATCTGCAAGCGTATCTTTTGA	717	0.4282	MEHDLKKIPSPSKGLLRSEELYEYILETSVYPREPEPLKELRRATANHPKALMATAPDAGQLISMLLQLLNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDVNCESYEIGLPIIRKAGVEHKIDFVESEALPALDQLLKDHANEGSFDFAFVDADKVNYWNYHERLMKLVKVGGVVVYDNTLWGGSVAMSEEDAPEFRKQGRQLTIEFNKLISADTRIHVSLAPFGDGITICKRIF	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g3092	238	Gene3D	Vaccinia Virus protein VP39	7	238	IPR029063	-
	Prci2g3092	238	ProSiteProfiles	SAM-dependent O-methyltransferase class I-type profile.	14	237	IPR002935	GO:0008171
	Prci2g3092	238	Pfam	O-methyltransferase	27	237	IPR002935	GO:0008171
	Prci2g3092	238	PANTHER	O-METHYLTRANSFERASE-RELATED	11	237	-	-
	Prci2g3092	238	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	17	236	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g3092	Prci-Chr2	38912424	38916596	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g3092	12	238	Monolignol Biosynthesis Gene Families	AT4G26220	71.366	2.44e-125	353

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g3092	K00588		-	zju:107423938	368.622