Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2990 ATGTCGTGCTCCGTTGCTCTCTCCAACTCTCCGGTCTTCTCTCCGTCGTCTTCCCTCTTCTGCAACAAGCCTTCCGTCATCACTTCCTCGCCGGAATCGCTATCTCTCTCCTTGTCCCACCTCAAGCCTTCTGCATCCGCTTCGTCCTCTTCTTCGCCTTCTTCTCCTTCATCGCCTTTCCGCCTCCGCCTCCTCAAGCCTCCCCCTCCTCCTTCCTCAAGCCTTTCCAATTCCGCCTCCGCCCCCGCTCCTTCCTCTTCCACCTCGCCTAACGGTACCGTCTTGAAGAGGAAGAGGCCCACAAGGCTTGATATTCCGGTCTCGTCTCTCACTTTTGGGGTTCCGGCAACGCCGTCTGCTTCGGTGGCTCGAGATGCTTTAGAGGCTGAGGGATTTGGGTTTTCTGTGTATTGTAAGAGAGGAAGGCGAGAGTACATGGAAGATCGTTATTCTGCTGCCGTCAATCTTCAAGGGCAATCCAAACAGGCTTTCTTTGGCATATTTGATGGGCACGGAGGTTCAAAAGCTGCTGAATTTGCTGCACGTAACTTAGAAAAGAACGTCATGGATGAAGTGGTAAGAAGAGATGAAGATGACATAGAGGAGGCAGTGAAACATGGGTACCTGAACACTGATTCTGATTTCTTAAAAGAGGATGTTCATGGTGGCTCCTGCTGTGTAACAGCACTGATCAGGAACGGAAACCTTGTTGTTTCTAACGCCGGCGATTGCCGTGCTGTTATTAGCCGAGGAGGCGTTGCAGAGGCCCTCACATCTGATCACAGGCCCTCAAGGGAAGATGAGAAAGACAGAATTGAGACCACTGGTGGCTATGTTGATTTATGCCACGGGGTCTGGAGGATCCAGGGATCTCTAGCCGTTTCTAGAGGAATTGGAGATCGGTACATGAAGCAATGGGTGATAGCTGAACCTGAGACTAAAGTTCTCAGGATTGAACCTGAACATGACTTGTTGATATTAGCTTCAGATGGATTGTGGGATAAGGTTACTAATCAAGAAGCTGTGGATATTGCTCGTCCTCTTTGCATTAGGGGTAGCAACATAGCACGTCCATTGATGGCCTAG 1086 0.5037 MSCSVALSNSPVFSPSSSLFCNKPSVITSSPESLSLSLSHLKPSASASSSSSPSSPSSPFRLRLLKPPPPPSSSLSNSASAPAPSSSTSPNGTVLKRKRPTRLDIPVSSLTFGVPATPSASVARDALEAEGFGFSVYCKRGRREYMEDRYSAAVNLQGQSKQAFFGIFDGHGGSKAAEFAARNLEKNVMDEVVRRDEDDIEEAVKHGYLNTDSDFLKEDVHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDEKDRIETTGGYVDLCHGVWRIQGSLAVSRGIGDRYMKQWVIAEPETKVLRIEPEHDLLILASDGLWDKVTNQEAVDIARPLCIRGSNIARPLMA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2990 361 FunFam probable protein phosphatase 2C 25 126 361 - -
Prci2g2990 361 SMART PP2C_4 123 356 IPR001932 -
Prci2g2990 361 ProSiteProfiles PPM-type phosphatase domain profile. 133 361 IPR001932 -
Prci2g2990 361 SUPERFAMILY PP2C-like 128 350 IPR036457 -
Prci2g2990 361 Gene3D - 125 358 IPR036457 -
Prci2g2990 361 MobiDBLite consensus disorder prediction 38 59 - -
Prci2g2990 361 PANTHER PROTEIN PHOSPHATASE 2C 73 345 IPR015655 GO:0004722|GO:0006470
Prci2g2990 361 MobiDBLite consensus disorder prediction 38 100 - -
Prci2g2990 361 Pfam Protein phosphatase 2C 134 346 IPR001932 -
Prci2g2990 361 ProSitePatterns PPM-type phosphatase domain signature. 164 172 IPR000222 GO:0043169
Prci2g2990 361 MobiDBLite consensus disorder prediction 76 95 - -
Prci2g2990 361 CDD PP2Cc 132 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2990 Prci-Chr2 37301495 37303753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2990 1 360 PP2C-type Phosphatase Gene Family AT2G30020 66.578 5.63e-165 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2990 K17506 - gmx:100797934 481.485