Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2983 ATGGTGAACATGAGCTCTCTACGCGACTCTGATTCTTCAATGGCTTCTTGGGTTCGAGGCAGTTGTATAGGTAAGGGCTCGTGTGGCACTGTGACTATCGGAGTGAGTAAATCCGACGGTCGGGTTTTCGCCGTGAAGTCCGTGGATCTTCAGTCGGGTCAGGTGGTGGCTTTGGAGAATGAGATTCGGATCCTTCGGAGCTTGTCGTCGCCGTACGTGGTGACCGTCCTAGGCGACGACGCTACTACGTCGTATCGGAACTTGTATTTGGAGTACTTGCCAGGTGGCACCCTCGCTGACCTAGCATCTCCGAAGAATGGTGGGAGGCCTGCTGACGTGGACGAGCGCGTGCTGCGGTACTTCACCTGGTGTGTGGTGAACGCGCTGAGGTACGTTCACTCGAGGGGCGTCGTCCACTGCGACGTCAAGGGGAGGAACGTTCTGGTAGGGCTCAATGGCGGCGTGGCTAAGCTCGCCGACTTCGGCTCGGCGGTGGAGCAGTGTTCCTCCGGTGCGGTGGCGGTGGGGATCGTGCCACGTGGAAGCCCGTTGTGGATGGCGCCAGAGGTGATTCGGCGGGAGTCTCAGGGACCGGAATCCGACGTGTGGTCCTTGGGATGCACGGTGATCGAGATGCTCACCGGGAAGCCAGGCTGGGACGAGGAAGGCTTTAACACGCTCAGTCGAATTGGATACTCCGACGAGTTACCGGAGTTTCCGAGTCAATTATCAGAACTCGGACGCGACTTCCTTCGCAGGTGTCTGAGGAGAGAACCAAGCGAGCGGTGGAGCTGTGATCAGCTGCTACACCATCCATTCTTGCTGTCTACACCTCCCAATAAGCTCGCAGAGTCGTCTCCTCGGTGCATCCTCGATTTGATAAACTCAGACGAATTCAAGGAAGAAGACGAAGAAGAAATCAGAATCCACAATGAAAATTCGGCGAATGACAGAATCCGCAAACTAGCTACAAAGTCGAGGGCAAATTGGGAAATGGAAGATGATTGGTTGGAGGTGAGGGCATTGGCGTCGAACACAGAAACCTCTATTGCTTCTTCAACCACTATTAGTGGCAGGGGAAGTGGAAGGGGACACGAAGACGATGAAGGGACAAGTTCGAAATATGTTGATTTGAGGAGGGTAGAAGAGGGAATAGAATTGGGGATAAGTTGGGAATATTTGAAAATGAGGAGGACAAATCTGAGGATAGGAAATTGGGTTGAGGATCACAGTGAAAATGATTGGCGATATGAGTATGGGCTGAAACACGAGGGGGGTCTGTTGAGAAAGATAAGAGCAATAACCATTTGCAGCTTGTGGTGTTATTGTTGGTGTGACTTCATATTAAAAATTAATTTTTTATTGCAAATGAATTTACATATTAAATATATTACTTTATCCTACCCTCACTCTCTTTCTATTTTTATTGTTATATATTATAAGGGTAAAATTTTTCAGATGATAATTCTTTATTGA 1476 0.498 MVNMSSLRDSDSSMASWVRGSCIGKGSCGTVTIGVSKSDGRVFAVKSVDLQSGQVVALENEIRILRSLSSPYVVTVLGDDATTSYRNLYLEYLPGGTLADLASPKNGGRPADVDERVLRYFTWCVVNALRYVHSRGVVHCDVKGRNVLVGLNGGVAKLADFGSAVEQCSSGAVAVGIVPRGSPLWMAPEVIRRESQGPESDVWSLGCTVIEMLTGKPGWDEEGFNTLSRIGYSDELPEFPSQLSELGRDFLRRCLRREPSERWSCDQLLHHPFLLSTPPNKLAESSPRCILDLINSDEFKEEDEEEIRIHNENSANDRIRKLATKSRANWEMEDDWLEVRALASNTETSIASSTTISGRGSGRGHEDDEGTSSKYVDLRRVEEGIELGISWEYLKMRRTNLRIGNWVEDHSENDWRYEYGLKHEGGLLRKIRAITICSLWCYCWCDFILKINFLLQMNLHIKYITLSYPHSLSIFIVIYYKGKIFQMIILY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2983 491 FunFam Serine threonine protein kinase putative 15 323 - -
Prci2g2983 491 SUPERFAMILY Protein kinase-like (PK-like) 15 306 IPR011009 -
Prci2g2983 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Prci2g2983 491 SMART serkin_6 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2983 491 ProSiteProfiles Protein kinase domain profile. 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2983 491 MobiDBLite consensus disorder prediction 350 372 - -
Prci2g2983 491 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 10 347 - -
Prci2g2983 491 CDD STKc_MAPKKK 16 274 - -
Prci2g2983 491 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g2983 491 Gene3D Transferase(Phosphotransferase) domain 1 8 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2983 Prci-Chr2 37256303 37257811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2983 17 490 MAP Kinase Kinase Kinase AT1G07150 47.205 1.24e-121 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci2g2983 Pkinase 6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2983 - - qsa:O6P43_014068 429.098