Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2981 ATGGCTTTTGAAAATGATCACCTTCACATCTTTCAATGGCGTTTCATTGAAATAAATCACTCAAACTTCCACTCATACAGCCATGGCATCTTCCTCCTGCTTTTCTTCTTCTCCCTCATCATTCTGATTGTCACATTGTTCCTTCTCGCCCACTTATGTCGCCAGCGCTTCCGAGTCACCTCTCAAGTACCGGCCAGTAGTACACTTCAGTGGGCAAAGTTTGAGATGGAATCAATGGAGAATAAGAGTGTAGGTGACTCGAATGTAGAATGCTGTATATGTTTGAGTGTGTTAAAGGATGTTGCGAAGGTGAAGGTGTTACCAGAATGTGAGCATGCTTATCATTCAGAGTGTGTGGACATGTGGTTAAGTGCAAACCCTAGTTGTCCTCTTTGCAGGAGAAAAGAGCCAAGACCCTCCCCAAATCCCTCCGATGTGGAACCTGATAACTCCCCCAACCAATCTGTGACGCCCCCATCACGGGTGGCCCACCAGAAGGGCCCACTGACTGGGCAAACTTGA 522 0.4693 MAFENDHLHIFQWRFIEINHSNFHSYSHGIFLLLFFFSLIILIVTLFLLAHLCRQRFRVTSQVPASSTLQWAKFEMESMENKSVGDSNVECCICLSVLKDVAKVKVLPECEHAYHSECVDMWLSANPSCPLCRRKEPRPSPNPSDVEPDNSPNQSVTPPSRVAHQKGPLTGQT 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2981 173 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
Prci2g2981 173 Pfam Ring finger domain 90 133 IPR001841 -
Prci2g2981 173 SMART ring_2 91 132 IPR001841 -
Prci2g2981 173 SUPERFAMILY RING/U-box 85 139 - -
Prci2g2981 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 138 IPR013083 -
Prci2g2981 173 MobiDBLite consensus disorder prediction 134 173 - -
Prci2g2981 173 MobiDBLite consensus disorder prediction 147 173 - -
Prci2g2981 173 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 80 142 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2981 Prci-Chr2 37223651 37225231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2981 83 152 C3H Transcription Factor Family AT2G42360 46.479 5.51e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2981 - - pcin:129302735 345.51