Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2978 ATGGAGTTCAAGATCAGAAGCTATGACGAACAATCTGATAGAGCTCAAGTGGAAGATCTCGAGAGAAGGTGCGAGGTAGGGCCAGCAGAAAGCGTTTTTCTCTTCACAGACACTATGGGTGATCCCATTTGTAGAATCCGAAACAGCCCCAAATACAATATGCTGGTAGCAGAGTTGGATAAGGAATTGGTTGGTGTGATTCAAGGTTCTATAAAATACGTGACAGTACCATGCAAGGATTTGGCTAAGGTAGGCTATGTCCTAGGTCTGAGGGTAGTGCCTCAACTTCGAAAAGGGATAGGTTCAAGGCTTGTTTTAAAACTCGAAGAATGGTTCAAATCAAACGACGTGGACTATGCTTACATGGCGACAGAGAAAGAGAATCATGCTTCTGTTGGTCTTTTCATGAACAAGTTTGGGTACACCAAGTTCAGAACACCTTCTATTCTGGTGAACCCAGTGAACCATAGGTGCTTCAGAATCTCACCCAACATTGAGATTTCAATGGTCAAGATCGATCAAGCTGAATCTCTGTACAGAAGATTCATGGGGTCCACTACTGAGTTCTTCCCCATTGACATAGACAAAATACTCAGAAACAAGCTTAGTTTAGGGACATGGGTGGCTCACTTCAAAGGAGATTATTTTGGGAGCCAAACAGTCCCTAATAGTTGGGCCATGCTTAGTGTTTGGAACAGTGGAGAAATCTTCAAGCTGAGGCTAGGCAAAGCACCTTTCTATTGCTTGCTATACACTAAGAGTTGGGGTTTGATTGATAAGATTTTCCCATGCTTGAAGCTTCCAAGTTTGCCTGATTTCTTCAGTCCATTTGGGTTTTATTTTTTGTATGGGGTTTATCATGAAGGGCCATTCGCTGAGAAGCTCGTGAGAGGGTTGTGTGAGTTTGTGCACAACATGGCAGCCAAGTGTAAAGATGAGAATTGTAAGATCGTTGTGACTGAAGTTGGAGGGAGAGATGAACTGAAACATCACATTCCACATTGGAAATTGCTGTCAAGTACTGAAGACTTGTGGTGCATAAAGGCACTCAAAAATAATAATGATGCCTCCAATAGTACTACGTTTCATGAGTTAACCAAAACTCCACCAACTAGAGCTCTTTTTGTAGATCCAAGAGAGGTTTAA 1146 0.4232 MEFKIRSYDEQSDRAQVEDLERRCEVGPAESVFLFTDTMGDPICRIRNSPKYNMLVAELDKELVGVIQGSIKYVTVPCKDLAKVGYVLGLRVVPQLRRXGIGSRLVLKLEEWFKSNDVDYAYMATEKENHASVGLFMNKFGYTKFRTPSILVNPVNHRCFRISPNIEISMVKIDQAESLYRRFMGSTTEFFPIDIDKILRNKLSLGTWVAHFKGDYFGSQTVPNSWAMLSVWNSGEIFKLRLGKAPFYCLLYTKSWGLIDKIFPCLKLPSLPDFFSPFGFYFLYGVYHEGPFAEKLVRGLCEFVHNMAAKCKDENCKIVVTEVGGRDELKHHIPHWKLLSSTEDLWCIKALKNNNDASNSTTFHELTKTPPTRALFVDPREV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2978 382 Pfam Acetyltransferase (GNAT) family 47 142 IPR000182 GO:0016747
Prci2g2978 382 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 145 IPR016181 -
Prci2g2978 382 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 382 - -
Prci2g2978 382 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 3 167 IPR000182 GO:0016747
Prci2g2978 382 CDD NAT_SF 54 122 - -
Prci2g2978 382 Gene3D - 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2978 Prci-Chr2 37011894 37013398 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Prci2g2978 Acetyltransf_1 1e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2978 - - gmx:100799507 617.846