Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2972 ATGAAAGAAGAAGCGTGGTGCGTCACCCGCTTAAAGCTGCGTACGGTGGTTTTCATGGCGGCGATCTCTCTGTTTTCTGTGTTCACAAAACAGAGCCTCTGTCTGTCTCTGAACAACCAAGGTTTGGCGTTGCTTAGGTTCAGAGACAGAGTCATCAATGACCCATTTGGAGCTTTATCGAATTGGAAGGCTAATGATGGAGCCATTGATCCGTGTTCGTGGTTCGGAGTTGAGTGTTCGGAAGGCAAAATCGTTACCTTGAATTTGAAAGACCTTTGTCTCCAAGGAACAATAGCTCTTGAAATTGCTAAGCTGACTCACATCAAAGCCATAATTCTACGCAACAATTCTTTCTTTGGAGAAATACCTAAGGAGATTATACAGTTAAAGGAGCTTGAAGTACTTGACTTGGGATATAACAACTTTAGTGGATCATTTCCATTTGAGACCAATCTATCCTTGACTACCATTTTGCTGGACAACAATGATTATCTGGCTAACTTGACTCCAGACATAGTTAAATCCAACATGATTTCTGAAACTCACTCAAACCAAGACCTGTCAAAAACATCATGTGTAAGCAGATCTAGTTTGAGGTACAAGAGGCAACTTCTTCAAATATCAAATTCTCCCACTTCGCTACCACCAGATTCTCAGGTTTTCTCACCATCTCCATCAATTCCACCATTTGAAGCTCCCTCAAGCTCTCCATCTGCATCAGCTCCCATATCATTTCCACCATTTTCATCACCGTCTCCCTCCATTTTTCACCCGCCTGCACCTTCATCTTCACCTTCACCTTCACCGGTGCCTTCACCTTCCCCTATAATAGAACAAAGTCCAGAAATTTCACCAGCAAATCCACCTTTTGATATATCCAATCCACCAGAGTCCAATGGAGTTCCAGCACCTTCTCCTGATTTATTTTCAAACCAAGGGAATTCTAAGGCAAAGCATCGTTCTGTGATAATTTGGTCTACAATAGGTGGTTTCTCCTTATTGGTTTTGGTGTCAGCAATTGCTTTTGCTTGCTTCTGTAATACCAAGGTTGTAACTGTAAAACCTTGGCCCATAAGCTTGAGTGGGCAGCTTCAGAAAGCTTTTGTAACAGGTGTGCCAAGTCTCAAACGAGCAGAACTTGAATCAGCATGTGAAGATTTCAGCAACATTATTGGATCTCTTCCTGAGGGTACTATTTATAAGGGAACATTATCCAGTGGAATTGAGATAGCAGTTGTATCCACTTCAATAATCTCACCTCAAAACTTTTCAAAACACATGGAAGCTCAATTTAAAAAGAAGTTAGAAACATTATCCAGACTTAACCACAAGAACTTTGTGAATCTGATTGGATTCTGTGAGGAGAAGCAGCCCTTCACAAGAATGATGGTTTTCGAGTATGCTCCAAATGGAACTCTCTATGAACATCTACACATTAGAGAAGCAGAGCAACTTGACTGGGCAATGAGAGTGAGAATAGCAATGGGAATAGCTTACTGTCTGGAGTATATGCATCAGCTAACACCGCCCATTGCTCACACAAACCTAAAATCTTCATCTATATGCCTAACTGAAGATTATGCTGCTAAAATATCAGATCTTAGTTTTTGGAGTGACATTGTTACTTCCATTAAAAAGGGTTCTTCTGAAGCCACAAGGCTCTTGGAAACACCATTAGCATATACAAAGGGAAATGTTTACAGCTTTGGATTAATACTGTTTGAACTGATAACAGGTAAAGTTCCCTATACTGAGGAAGATGGAATTCTTTCAGATTGGGCTGCTGAATATATAAGATGGGGGAAGAAGCCCCTTATTGATGTGGTGGACCCCACTCTGACCACTTTAAAAGAAGAAGAGATAGAGAAGTGGTTCCAAGTGATGATAGAATGTGCACATTCAGACCCAGATAAAAGGCCAACTATGAGAGAGGTTACTGCTAAGTTGAAGGAAATTACGGCAATGGAGCCGGATGAAGCCATACCAAAATTATCTCCTCTTTGGTGGGCAGAGCTAGAAATCAAGTCTGGGGATTTAAGTTGA 2043 0.4116 MKEEAWCVTRLKLRTVVFMAAISLFSVFTKQSLCLSLNNQGLALLRFRDRVINDPFGALSNWKANDGAIDPCSWFGVECSEGKIVTLNLKDLCLQGTIALEIAKLTHIKAIILRNNSFFGEIPKEIIQLKELEVLDLGYNNFSGSFPFETNLSLTTILLDNNDYLANLTPDIVKSNMISETHSNQDLSKTSCVSRSSLRYKRQLLQISNSPTSLPPDSQVFSPSPSIPPFEAPSSSPSASAPISFPPFSSPSPSIFHPPAPSSSPSPSPVPSPSPIIEQSPEISPANPPFDISNPPESNGVPAPSPDLFSNQGNSKAKHRSVIIWSTIGGFSLLVLVSAIAFACFCNTKVVTVKPWPISLSGQLQKAFVTGVPSLKRAELESACEDFSNIIGSLPEGTIYKGTLSSGIEIAVVSTSIISPQNFSKHMEAQFKKKLETLSRLNHKNFVNLIGFCEEKQPFTRMMVFEYAPNGTLYEHLHIREAEQLDWAMRVRIAMGIAYCLEYMHQLTPPIAHTNLKSSSICLTEDYAAKISDLSFWSDIVTSIKKGSSEATRLLETPLAYTKGNVYSFGLILFELITGKVPYTEEDGILSDWAAEYIRWGKKPLIDVVDPTLTTLKEEEIEKWFQVMIECAHSDPDKRPTMREVTAKLKEITAMEPDEAIPKLSPLWWAELEIKSGDLS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2972 680 Pfam Leucine rich repeat N-terminal domain 38 80 IPR013210 -
Prci2g2972 680 SUPERFAMILY L domain-like 38 172 - -
Prci2g2972 680 MobiDBLite consensus disorder prediction 207 313 - -
Prci2g2972 680 FunFam Inactive receptor-like serine/threonine-protein kinase 359 467 - -
Prci2g2972 680 Gene3D Phosphorylase Kinase; domain 1 359 467 - -
Prci2g2972 680 FunFam Leucine-rich repeat receptor-like kinase 40 188 - -
Prci2g2972 680 PANTHER PROTEIN MALE DISCOVERER 2 19 676 - -
Prci2g2972 680 Pfam Protein tyrosine and serine/threonine kinase 389 649 IPR001245 GO:0004672|GO:0006468
Prci2g2972 680 Gene3D Ribonuclease Inhibitor 40 169 IPR032675 -
Prci2g2972 680 Gene3D Transferase(Phosphotransferase) domain 1 468 662 - -
Prci2g2972 680 MobiDBLite consensus disorder prediction 244 278 - -
Prci2g2972 680 SUPERFAMILY Protein kinase-like (PK-like) 370 649 IPR011009 -
Prci2g2972 680 ProSiteProfiles Protein kinase domain profile. 385 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2972 Prci-Chr2 36593004 36600815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2972 16 652 Receptor kinase-like Gene Family AT2G01210 25.603 1.22e-47 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Prci2g2972 PK_Tyr_Ser-Thr 1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2972 - - gmx:100801161 749.584