Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2970 ATGACCACTTCTTCTCCTGAAGACGTTCATGCTTCTTCTCGCACTACTTCCTTATTCAAAACCTGTTTCCATGGCGTCAATGGCATTTCAGGGATTGGGATAGTCTCCATACCATATGCTTTAGCATCAGGAGGATGGCTAAGCTTGATACTTCTGTTCATAATAGCCATCGCAGCGTATTACACAGGAATCTTAATAAAACGATGCATGGACAAAGATTCCACCATAGAATCTCTTCCCGACATAGGCCAACGAGCCTTTGGAGACAAAGGAAGGTTGATGGTGAACATAGCCATGAACTGTGAACTGTATCTGGTCGTAACAGGTTATCTTATTCTGGAAGGAGACAACCTCAACAAGCTCATAACACATGTGCATGTGGACATAGGAGGGATAAGAATTGGTGGCATGCAATGTTTTGTTGTTCTTACGGCTCTGATAATTTTGCCCACTGTTTGGTTGCAAGATTTGAGCCTTCTCTCTTATGTGTCAGCCACTGGGGCTTTAGCTTCTACAATATTTCTCTGTGCTTTGTTGTGGAACGGTGCGTTTGATGGGACAGGGTTTCATTATCGCAAAGGTGTTCTTTTTAACTGGAAAGGACTTCCTGCTGCTGCTAGCTTATATGCTTTTTGTTACAGTGCTCATCCAGTTTTTCCAAATCTCTACACTTCTATGAAGAACAAACATCAGTTTTCTAATGTTCTTCTAGTGTGCTTTACACTATGCACCTTAATATATGCAGCAATAGCAGTGCTGGGTTACTTGATGTTCGGATCAGAAGTTCAATCAGAAGTAACCTTAAACCTTCCAAAAGGAAAAATAAGCTCAAAGGTTGCAATTTATACAACATTAGTGAATCCAATAACAAAGTATGCTCTGATGCTCACACCAATTGTGGACGCCATAAAAGCCACAATCCCTTCAAGCTTCAACAAGAAGAAGGCCTCACATTTAGTTCTGAGCACCGCCTTGCTCCTCAGCACCGTGGTCGTCGCCCTCGCCGTGCCATTCTTCGGATATTTGATGTCTCTGGTCGGAGCTTTGTTGAGTGTGTCTGCTTCATTTCTGGTTCCATGCGTGTGTTATTTGAAGATCTCAGGCAATTATAAGAAGTTTGGATGGGATATGATCGTCAATTATGCAATCATCCTTATGGGAATTTCTATTGCAGCTGTGGGAACTTACACTTCCCTGGTAGAAATAATTAAACATTTAAAAGTCTAA 1227 0.4173 MTTSSPEDVHASSRTTSLFKTCFHGVNGISGIGIVSIPYALASGGWLSLILLFIIAIAAYYTGILIKRCMDKDSTIESLPDIGQRAFGDKGRLMVNIAMNCELYLVVTGYLILEGDNLNKLITHVHVDIGGIRIGGMQCFVVLTALIILPTVWLQDLSLLSYVSATGALASTIFLCALLWNGAFDGTGFHYRKGVLFNWKGLPAAASLYAFCYSAHPVFPNLYTSMKNKHQFSNVLLVCFTLCTLIYAAIAVLGYLMFGSEVQSEVTLNLPKGKISSKVAIYTTLVNPITKYALMLTPIVDAIKATIPSSFNKKKASHLVLSTALLLSTVVVALAVPFFGYLMSLVGALLSVSASFLVPCVCYLKISGNYKKFGWDMIVNYAIILMGISIAAVGTYTSLVEIIKHLKV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2970 408 PANTHER OS05G0424000 PROTEIN-RELATED 22 394 - -
Prci2g2970 408 Pfam Transmembrane amino acid transporter protein 14 398 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2970 Prci-Chr2 36507934 36510985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2970 1 403 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.583 3.39e-163 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2970 K15015 - gmx:100804353 512.301