Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2949 ATGGGTGGTTCTTCTCCTTGTGCTTCCTGCAAGTTGCTACGACGTCGTTGCACCCAGGAGTGCATTTTCGCTCCTTACTTTCCTTCTGATGATCCTCAAAAGTTTGCCATCGTCCACAAAGTCTTCGGTGCCAGCAATATCAGCAAAATGTTGCAGGAGCTTCCAGTGCATCAAAGAGCGGATGCAGTTAGCAGTCTGGTGTACGAAGCGAACGCGAGAGTGAGAGATCCGGTGTACGGATGCGTCGGAGCTATATCCTACCTGCAAAATCAAGTTACACAGTTAAAGACGCAGCTTGCAATGGCACAGACAGAGATTATGTGCATCCAGATGCAGCAAGATTATTCTACAAACTTATCAACTCAGACTGATCATTACCAAGATGACAATAAGTCGCTTGTCTTATCTGATAACAACTATGAAAGCTGCAATATTAATCATAATCTTGCCGATCATCATCATCATCAGTATCTCAGTTTTGCTTCTTCTTCTTCCTCGTCTAGTAATGTAATCCAGGACCCTTTTAAGAGGGAATCATTTTGGACTTAG 549 0.4372 MGGSSPCASCKLLRRRCTQECIFAPYFPSDDPQKFAIVHKVFGASNISKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVTQLKTQLAMAQTEIMCIQMQQDYSTNLSTQTDHYQDDNKSLVLSDNNYESCNINHNLADHHHHQYLSFASSSSSSSNVIQDPFKRESFWT 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2949 182 Coils Coil 85 105 - -
Prci2g2949 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 146 - -
Prci2g2949 182 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Prci2g2949 182 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2949 Prci-Chr2 35652016 35653752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2949 3 182 AS2 family AT2G30130 64.550 2.55e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci2g2949 LOB 7.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2949 - - pcin:129314068 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2949 2 35652016 35653752 Prci2g2949 2 35652016 35653752 ECH